Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10j24
         (616 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              30   0.021
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             29   0.027
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    22   5.5  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   9.6  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   9.6  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   9.6  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 29.9 bits (64), Expect = 0.021
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -1

Query: 304 RRVSAVCGSDGQTYRSLCKLRRQAC 230
           RR   VC S+G+ Y + C+L R AC
Sbjct: 112 RRHRPVCASNGKIYANHCELHRAAC 136


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 29.5 bits (63), Expect = 0.027
 Identities = 18/55 (32%), Positives = 28/55 (50%)
 Frame = -3

Query: 305 PQSERGVRQRRADLPLAVQITPTSLSQAS*ALGRRLPWTLLKF*APNRT*YLVKI 141
           PQS+     R A+ P++VQ+ P + S  + AL    P  L ++  P R   LV +
Sbjct: 445 PQSDSSSSSRSAESPMSVQVDPMAASVVAAALTGTYPTLLPQWCLPPREAPLVGV 499


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 11/35 (31%), Positives = 14/35 (40%)
 Frame = +3

Query: 291 ALTLRHDAAQTHLARPPLTTQRRPAPQDIPAHDSV 395
           +LTL       HLA    T    P P  +P   +V
Sbjct: 29  SLTLVKAETPEHLAGTSTTAAATPTPPSVPVGSAV 63


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -1

Query: 238 QACRKPAKHLVVDYHGHY*NFEHQ 167
           QA R    +L   YHG Y N + Q
Sbjct: 712 QAVRNYYANLYTKYHGQYPNTQIQ 735


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 330 ARPPLTTQRRPAPQDIPA 383
           A PP+   R  APQ IPA
Sbjct: 54  ALPPVGKFRFKAPQKIPA 71


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +3

Query: 330 ARPPLTTQRRPAPQDIPA 383
           A PP+   R  APQ IPA
Sbjct: 54  ALPPVGKFRFKAPQKIPA 71


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,956
Number of Sequences: 438
Number of extensions: 3117
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)