Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10j21
         (732 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g23200.1 68417.m03346 protein kinase family protein contains ...    30   1.8  
At1g19690.1 68414.m02455 expressed protein similar to (SP:P76370...    29   4.2  
At3g20460.1 68416.m02590 sugar transporter, putative similar to ...    28   7.3  
At2g18850.1 68415.m02196 SET domain-containing protein low simil...    27   9.7  
At1g14430.1 68414.m01711 glyoxal oxidase-related low similarity ...    27   9.7  

>At4g23200.1 68417.m03346 protein kinase family protein contains
           Pfam PF00069: Protein kinase domain
          Length = 648

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +1

Query: 583 EAALYWIQHGMMCIIPYYLLRLGGVYNIEPIRDFNWSVFSYCLN 714
           E AL WI +  +C+I Y      G + +EP R+F  S+  Y  N
Sbjct: 103 ENALIWIANRTICMIRYSDTSFVGSFELEPHREF-LSIHGYKTN 145


>At1g19690.1 68414.m02455 expressed protein similar to (SP:P76370)
           Protein yeeZ precursor. {Escherichia coli O157:H7}
          Length = 352

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +1

Query: 553 PETASRKIFVEAALYWIQHGMMCIIPYYLLRLGGVY 660
           P+T S K+ + A   W+  G    +   +LRLGG+Y
Sbjct: 178 PKTQSAKVRLAAEQGWLSLGRDLGVSTQILRLGGIY 213


>At3g20460.1 68416.m02590 sugar transporter, putative similar to
           ERD6 protein [Arabidopsis thaliana] GI:3123712,
           sugar-porter family proteins 1 and 2 [Arabidopsis
           thaliana] GI:14585699, GI:14585701; contains Pfam
           profile PF00083: major facilitator superfamily protein
          Length = 488

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
 Frame = -3

Query: 199 IQGPHFLGQLY--LHHYTPIRTFL*HIQFINFI 107
           I G  FL Q Y  L HYTPI TF+  + F+  I
Sbjct: 366 ITGLSFLFQSYGLLEHYTPISTFMGVLVFLTSI 398


>At2g18850.1 68415.m02196 SET domain-containing protein low
           similarity to ribulose-1,5-bisphosphate
           carboxylase/oxygenase small subunit N-methyltransferase
           I [Spinacia oleracea] GI:3403236; contains Pfam profile
           PF00856: SET domain
          Length = 448

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = -1

Query: 438 MTWIQQIYHSV*SKFKPYFHSP**C*KD*KQSFAASVTFGV 316
           + W  +  H++ SKFKPYF S        +++F   ++FGV
Sbjct: 226 LLWTMREKHNLDSKFKPYFDSL-------QENFCTGLSFGV 259


>At1g14430.1 68414.m01711 glyoxal oxidase-related low similarity to
           glyoxal oxidase precursor (glx1) [Phanerochaete
           chrysosporium] GI:1050302
          Length = 849

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +3

Query: 375 GNGNRV*ICFTHCDIFVESMSCNNINTNLFTS 470
           GNG R    FT CD  V S+SC+ I    + S
Sbjct: 136 GNGERTVRVFTPCDGGVGSVSCDWIENRAYLS 167


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,398,954
Number of Sequences: 28952
Number of extensions: 319874
Number of successful extensions: 636
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 636
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1604469728
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)