Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10j19
         (672 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF099919-3|AAC68801.2|  862|Caenorhabditis elegans Hypothetical ...    29   3.0  
AL033514-18|CAA22085.1|  170|Caenorhabditis elegans Hypothetical...    29   4.0  
AL110480-1|CAB60325.2|  437|Caenorhabditis elegans Hypothetical ...    28   6.9  
AF025464-8|AAB71019.1|  714|Caenorhabditis elegans Hypothetical ...    28   6.9  

>AF099919-3|AAC68801.2|  862|Caenorhabditis elegans Hypothetical
           protein F40G9.9 protein.
          Length = 862

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
 Frame = -3

Query: 244 NDLGLCLIQHCRITS--NTLSQRTSW*PFSTRHLWISHANL 128
           ND G+  + H  +T+  +T+   T W  F+ RHLW+S AN+
Sbjct: 178 NDSGILNLNHLYLTNAGSTIDLPT-W-QFNGRHLWLSGANI 216


>AL033514-18|CAA22085.1|  170|Caenorhabditis elegans Hypothetical
           protein Y75B8A.18 protein.
          Length = 170

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 18/63 (28%), Positives = 26/63 (41%)
 Frame = +2

Query: 431 FFSKPIYDIFIRPRDTIDLSEPPTTFLYKELETQAEN*LIWNQLQKQGTDSRNIPSYTRS 610
           FF      IF+   D + L EP T  L  E+  Q E   + N   +  T   +I  Y ++
Sbjct: 35  FFLNQFLSIFLEMSDFVVLGEPTTNNLSPEVGCQTEEIAVENMTTQ--TAEESITKYRKN 92

Query: 611 ARN 619
             N
Sbjct: 93  TEN 95


>AL110480-1|CAB60325.2|  437|Caenorhabditis elegans Hypothetical
           protein Y24F12A.1 protein.
          Length = 437

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = +2

Query: 314 TRYIMDNQRRRSTTL--GQRSWIYKYPKTFQITFTAFALGIFFSKPIYDIFI 463
           T Y+  +  RR T    G   WI KYP+ F   F  F L   F KP  D+F+
Sbjct: 148 TDYMYTSLARRKTNSNEGLLDWIEKYPRAFPKCF--FGLIANFIKP--DLFV 195


>AF025464-8|AAB71019.1|  714|Caenorhabditis elegans Hypothetical
           protein F53G2.1 protein.
          Length = 714

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = -2

Query: 227 LDTALSHHFEHLIAADFLVAVLNKT 153
           L ++++H+++HLI  DFL  +L  T
Sbjct: 627 LPSSIAHYYKHLITLDFLHDILKTT 651


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,926,592
Number of Sequences: 27780
Number of extensions: 310841
Number of successful extensions: 868
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 868
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)