Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10j19
         (672 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   4.6  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   6.1  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   8.1  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 60  EILLCVYLTIFGNGNP 13
           E LL V  + FGNG+P
Sbjct: 514 EALLLVITSTFGNGDP 529


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 489 PSPRRLSFIKNSRHRPR 539
           P   R++F K  RH PR
Sbjct: 142 PGTPRINFTKLKRHHPR 158


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 14/42 (33%), Positives = 17/42 (40%)
 Frame = +3

Query: 174 QEVRCDKVFEVMRQCCIKHKPRSLVCEGYDLEPRQFAPVTDR 299
           +EV       VMR    +  PR     GY +  R FAP   R
Sbjct: 210 REVFAVNFMNVMRMKLKQFMPRLYDLLGYVMPDRTFAPFFTR 251


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,289
Number of Sequences: 438
Number of extensions: 3835
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)