Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10j18
(675 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_59196| Best HMM Match : DUF593 (HMM E-Value=1.7) 36 0.023
SB_46910| Best HMM Match : DUF963 (HMM E-Value=3.3) 36 0.023
SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.052
SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.091
SB_45659| Best HMM Match : E_Pc_C (HMM E-Value=1.2) 31 1.1
SB_26151| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_20537| Best HMM Match : Vicilin_N (HMM E-Value=2.6) 30 1.5
SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19) 30 1.5
SB_24662| Best HMM Match : DUF229 (HMM E-Value=1.2e-26) 30 1.5
SB_5625| Best HMM Match : DBR1 (HMM E-Value=1.1e-26) 30 1.5
SB_18961| Best HMM Match : zf-U1 (HMM E-Value=0.07) 30 2.0
SB_40812| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_27024| Best HMM Match : Pkinase (HMM E-Value=4.7e-25) 29 2.6
SB_54719| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.045) 29 2.6
SB_46960| Best HMM Match : Neuromodulin (HMM E-Value=3.6) 29 2.6
SB_18473| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_8307| Best HMM Match : F5_F8_type_C (HMM E-Value=2.7e-22) 29 3.4
SB_56325| Best HMM Match : Ribosomal_L14e (HMM E-Value=0.84) 29 4.5
SB_52135| Best HMM Match : RCSD (HMM E-Value=4.8) 29 4.5
SB_12964| Best HMM Match : RVT_1 (HMM E-Value=5.6e-31) 29 4.5
SB_35403| Best HMM Match : Lectin_C (HMM E-Value=1e-05) 29 4.5
SB_49644| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_18299| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_52212| Best HMM Match : Rho_N (HMM E-Value=5.2e-05) 28 7.9
SB_49459| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_18379| Best HMM Match : Rho_N (HMM E-Value=5.2e-05) 28 7.9
SB_15824| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_13773| Best HMM Match : TolA (HMM E-Value=0.042) 28 7.9
SB_9305| Best HMM Match : Autophagy_N (HMM E-Value=5.5) 28 7.9
SB_4911| Best HMM Match : LRR_1 (HMM E-Value=0.12) 28 7.9
SB_58447| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_57637| Best HMM Match : SRP40_C (HMM E-Value=2.3e-08) 28 7.9
SB_46327| Best HMM Match : Rho_N (HMM E-Value=4.2e-05) 28 7.9
SB_19314| Best HMM Match : Rho_N (HMM E-Value=5.2e-05) 28 7.9
SB_13431| Best HMM Match : Seryl_tRNA_N (HMM E-Value=2.3) 28 7.9
>SB_59196| Best HMM Match : DUF593 (HMM E-Value=1.7)
Length = 1376
Score = 36.3 bits (80), Expect = 0.023
Identities = 26/92 (28%), Positives = 46/92 (50%)
Frame = +2
Query: 344 RNEESASIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVLRI 523
R EESA +E + E+ V+ ++ V+ +++ ++ L + V+E L I
Sbjct: 789 RVEESAIVEESAIVEESAIEEKSEIVEESEIVEVSTLEIQEE-SLDVGECEIVEESNLEI 847
Query: 524 QDDEETEEYSSKHVRPNTQTVTIKESTNQIQT 619
Q+D TEE + + V +++ IKES QT
Sbjct: 848 QEDPVTEEITEESVLQTEESLIIKESVVSEQT 879
>SB_46910| Best HMM Match : DUF963 (HMM E-Value=3.3)
Length = 984
Score = 36.3 bits (80), Expect = 0.023
Identities = 26/92 (28%), Positives = 46/92 (50%)
Frame = +2
Query: 344 RNEESASIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVLRI 523
R EESA +E + E+ V+ ++ V+ +++ ++ L + V+E L I
Sbjct: 789 RVEESAIVEESAIVEESAIEEKSEIVEESEIVEVSTLEIQEE-SLDVGECEIVEESNLEI 847
Query: 524 QDDEETEEYSSKHVRPNTQTVTIKESTNQIQT 619
Q+D TEE + + V +++ IKES QT
Sbjct: 848 QEDPVTEEITEESVLQTEESLIIKESVVSEQT 879
>SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4865
Score = 35.1 bits (77), Expect = 0.052
Identities = 26/113 (23%), Positives = 53/113 (46%), Gaps = 2/113 (1%)
Frame = +2
Query: 341 RRNEESASIENKSGSEDINDSSSLRNVDGTKGVDP--QKIKLDDKLELSRIRTDSVQEDV 514
RR AS + +G+ + + S SL ++ G++ ++P Q + D LE+ T+ + +
Sbjct: 756 RRRNSIASTKPWTGTLETSLSQSL-DLHGSREMEPDSQPCQEDINLEIPLCHTEGYRRKI 814
Query: 515 LRIQDDEETEEYSSKHVRPNTQTVTIKESTNQIQTRKTSLKRKLEEESAAGTS 673
E ++ NT+T + TN+++T++ SL S G++
Sbjct: 815 ATNHHPAVHGESDKADLKINTETTDDNKMTNRVKTKEESLGTSPRRSSIGGST 867
>SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 950
Score = 34.3 bits (75), Expect = 0.091
Identities = 28/106 (26%), Positives = 46/106 (43%)
Frame = +2
Query: 338 ERRNEESASIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVL 517
E+ N+ E +S E+ + S +G K KI + E + D E+
Sbjct: 677 EKSNDSLCLSEEESEEEESEEESEEDEEEGAKPSASAKIAKTSETENKVPKVDKDDEED- 735
Query: 518 RIQDDEETEEYSSKHVRPNTQTVTIKESTNQIQTRKTSLKRKLEEE 655
DDEE E + +P+++ VT K+ + +K K+K EEE
Sbjct: 736 --DDDEEEESEEDESNKPSSRQVTAKK-----EDKKGKKKKKEEEE 774
>SB_45659| Best HMM Match : E_Pc_C (HMM E-Value=1.2)
Length = 1244
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
Frame = +2
Query: 353 ESASIENKSGSEDINDSSSLRNVDGTKGVDPQKI--KLDDKLELSRIRTDSVQEDVLRIQ 526
E + + +DI+DS S DG G + + + K D K + + R S E V+R+
Sbjct: 276 EHQGVISSDHQQDISDSGSSEG-DGRHGNNDEDVYDKDDQKHKKPKKRHKS-PERVVRLS 333
Query: 527 DDEETEEYSSKHVRPNTQTVTIKESTNQIQTRKT 628
++ +++ SKH R + ++K + Q T
Sbjct: 334 HKKKKKKHKSKHSRKDKLAPSVKYKNEEHQKPNT 367
>SB_26151| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/99 (22%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Frame = +2
Query: 359 ASIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVLR-IQDDE 535
A E + GS SSS ++ K +K L++++ +++ ++++E+V+ I+ DE
Sbjct: 149 AETEWEKGSLTRELSSSKSIIEKMK---TEKKNLENEVASLKLKQETIKEEVVEEIEGDE 205
Query: 536 ETEEYSSKHVRPNTQTVTIKESTNQIQTRKTSLKRKLEE 652
E ++ +K+ + + T++ + +QT+ L+ E+
Sbjct: 206 EFQKLQNKYKQVVEEKNTLQGELDGLQTQLEELQADYEQ 244
>SB_20537| Best HMM Match : Vicilin_N (HMM E-Value=2.6)
Length = 624
Score = 30.3 bits (65), Expect = 1.5
Identities = 23/106 (21%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
Frame = +2
Query: 350 EESASIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVLRIQD 529
E S + E N ++R + VD L + + R +++ED++ ++
Sbjct: 366 ETSRDTQQMDNQEKYNPQENIRIISTQPTVDAHAKDLQE----TDTRAHNIKEDMVTYEE 421
Query: 530 DEETEEYSSKHVRPNTQT---VTIKESTNQIQTRKTSLKRKLEEES 658
+++TEE+ + V T ++ + Q+ +KT L +EES
Sbjct: 422 NQQTEEHKASEVTDEDTTPKKSSLPQRQEQLSEQKT-LGSMTKEES 466
>SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19)
Length = 3107
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/68 (27%), Positives = 37/68 (54%)
Frame = +2
Query: 446 QKIKLDDKLELSRIRTDSVQEDVLRIQDDEETEEYSSKHVRPNTQTVTIKESTNQIQTRK 625
QK +L +L+ SR T VQ+D RIQ +++ + + + T T + +++ K
Sbjct: 394 QKAQLHSQLKESRCVTKRVQDDYSRIQRKLSEKQWELEALERDLSTRT--DMVRKLRDEK 451
Query: 626 TSLKRKLE 649
++L++K E
Sbjct: 452 SALEKKNE 459
>SB_24662| Best HMM Match : DUF229 (HMM E-Value=1.2e-26)
Length = 972
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/78 (24%), Positives = 36/78 (46%)
Frame = +2
Query: 416 NVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVLRIQDDEETEEYSSKHVRPNTQTVTIK 595
+VD T +P ++ +++ + S+ ED LR+ E E ++ RP + +
Sbjct: 870 DVDFTDAPEPDMARIAQRMQKDPLFFVSLPEDDLRLAIGFEPAELAAVLDRPEREASYYQ 929
Query: 596 ESTNQIQTRKTSLKRKLE 649
E+ Q R+T L+ E
Sbjct: 930 ETCRQELDRRTELREATE 947
>SB_5625| Best HMM Match : DBR1 (HMM E-Value=1.1e-26)
Length = 566
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/70 (24%), Positives = 33/70 (47%)
Frame = +2
Query: 335 LERRNEESASIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDV 514
LE N++S + + ++IN S + G K DP +I L+D + S + D
Sbjct: 387 LEDDNDDSNHGKKATDPDEINLDDSDDSDHGKKATDPDEINLEDDNDDSNHGKKATDPDE 446
Query: 515 LRIQDDEETE 544
+ + D+ ++
Sbjct: 447 INLDGDDNSD 456
>SB_18961| Best HMM Match : zf-U1 (HMM E-Value=0.07)
Length = 844
Score = 29.9 bits (64), Expect = 2.0
Identities = 23/103 (22%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
Frame = +2
Query: 350 EESASIENKSGSEDINDSSSLRNVDGTKG-VDPQKIKLDDKLELSRIRTDSVQEDVLRIQ 526
+E A+ E ++ S ++ +K + QK +DD +T+ +ED
Sbjct: 404 KEKATAEASETPTKSKETDSSEKMETSKEEAEQQKTAIDDASAGDEEKTEVKKEDATVEI 463
Query: 527 DDEETEEYSSKHVRPNTQTVTIKESTNQIQTRKTSLKRKLEEE 655
E TEE S Q + KE Q + K K++ +++
Sbjct: 464 QKERTEEEESSSKEEKKQESSSKEEKKQESSSKEEKKQEKDDK 506
>SB_40812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1168
Score = 29.5 bits (63), Expect = 2.6
Identities = 27/125 (21%), Positives = 51/125 (40%), Gaps = 2/125 (1%)
Frame = +2
Query: 257 ESRGRRLFKKVIRRXXXXXXXXXXXXLERRNEESASIENKSGSEDINDSSSLRNVDGTKG 436
+ +GR+ KKV R L N + S E+ +D +D + D G
Sbjct: 149 DKKGRKKAKKV--RLIKKACQPVPGNLSNDNAGTESGESNDDDDDGDDDDD-DDDDDDDG 205
Query: 437 VDPQKIKLDDKLELSRIRTDSVQEDVLRIQDDEETEEYSSKHVRP--NTQTVTIKESTNQ 610
V+ ++ ++ DK+ + +V + +D E++ E + + V + Q + K T
Sbjct: 206 VEEEEDEISDKVNYDSVNNGTVNLQATKAKDIEKSPERNPQTVSNSYSDQGIECKIKTTT 265
Query: 611 IQTRK 625
I K
Sbjct: 266 ISANK 270
>SB_27024| Best HMM Match : Pkinase (HMM E-Value=4.7e-25)
Length = 1595
Score = 29.5 bits (63), Expect = 2.6
Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 5/113 (4%)
Frame = +2
Query: 344 RNEESASIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDV--- 514
RNE+S S + G+ ND + + D +G +K D L + + + ED+
Sbjct: 1086 RNEKSNSDGDLMGTSRENDDTDTKRTDAERG---EKGNSDGDLMGTSVDSGFAAEDLGAC 1142
Query: 515 LRIQDDEETEEYSSKHVRPN--TQTVTIKESTNQIQTRKTSLKRKLEEESAAG 667
L QDDE+ + S + +T + KE+ + Q + + K +S G
Sbjct: 1143 LTKQDDEDQDRIGSVEEGASIADETESNKETKEKHQEDEVGVSNKESTQSGEG 1195
>SB_54719| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.045)
Length = 782
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/95 (20%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Frame = +2
Query: 374 KSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTD--SVQEDVLRIQDDEETEE 547
K+ +++ + DG K ++ +K K E+ R+RT+ +QE+ ++E E
Sbjct: 313 KTSKKEVESEKVISRTDGKKVLELEKDISKKKNEIRRLRTELSQLQENSKHKHFEKELEG 372
Query: 548 YSSKHVRPNTQTVTIKESTNQIQTRKTSLKRKLEE 652
++ + T+ +++ +I K+ L++ E+
Sbjct: 373 RKAEIKQLKTEINQLQQKLKEISGLKSELQKIREQ 407
>SB_46960| Best HMM Match : Neuromodulin (HMM E-Value=3.6)
Length = 557
Score = 29.5 bits (63), Expect = 2.6
Identities = 31/163 (19%), Positives = 68/163 (41%), Gaps = 5/163 (3%)
Frame = +2
Query: 185 DQDVKSGKLPNNNISIMENDPNKKESRGRRLFKKVI---RRXXXXXXXXXXXXLERRNEE 355
D+DV+S + +I +E+D KE+ G ++ ++ ++
Sbjct: 142 DEDVESNNNEDEDIQEVEDDNEGKENDGGESDEENDDDDEDGDDEGDDDDRNVIDLKHMV 201
Query: 356 SASIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQE--DVLRIQD 529
++ E+ S ++DS+S ++ K +K+K+DD +I+ +E + I
Sbjct: 202 KSNKESLSNGSTLDDSNSDSEIEFRKRKRKKKLKVDDASGSKKIKKGKAKEVGHTVPIGT 261
Query: 530 DEETEEYSSKHVRPNTQTVTIKESTNQIQTRKTSLKRKLEEES 658
D + +K +PN + + TRK + + ++S
Sbjct: 262 DVNPAK-KTKRKKPNLDISDTRRVITERDTRKENKDKNKRKKS 303
>SB_18473| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 52
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2
Query: 494 DSVQEDVLRIQDDEETEEYSSKHVRPNTQTVTIKESTNQ 610
+S ++D L + D EE E ++V PNTQT T + ST +
Sbjct: 5 ESDEDDSLDLFDVEE--ESDEENVNPNTQTSTSRTSTQE 41
>SB_8307| Best HMM Match : F5_F8_type_C (HMM E-Value=2.7e-22)
Length = 370
Score = 29.1 bits (62), Expect = 3.4
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 7/99 (7%)
Frame = +2
Query: 371 NKSGSEDINDSSSLRNVDGTKGVD-------PQKIKLDDKLELSRIRTDSVQEDVLRIQD 529
++ G I S +VD K D +K+ D+ RI+ ++EDV RI+D
Sbjct: 265 DEQGERSIKGSGIKEDVDRIKDDDRETIVMKTEKLVQTDEQGERRIKESGIKEDVDRIKD 324
Query: 530 DEETEEYSSKHVRPNTQTVTIKESTNQIQTRKTSLKRKL 646
D+ E K + VT ++ Q QT + S +K+
Sbjct: 325 DDR-ETTVIKTEKQVQNEVTDEDEKYQKQTGRHSETQKI 362
>SB_56325| Best HMM Match : Ribosomal_L14e (HMM E-Value=0.84)
Length = 650
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 341 RRNEESASIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRT 493
+R+E S I S +D +S+L D + G + +L ++ELS +RT
Sbjct: 72 QRDENSPGIWTSSNQDDSLVASNLEETDESDGDTSEVERLQHEVELSVLRT 122
>SB_52135| Best HMM Match : RCSD (HMM E-Value=4.8)
Length = 476
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +2
Query: 494 DSVQEDVLRIQDDEETEEYSSKHVRPNTQTVTIKESTNQIQTRKTSLKRK 643
D +Q+ VLR + E SK + T T+KE + ++T K SLK K
Sbjct: 120 DEIQKVVLR-----KVERSHSKKEEDSKSTDTVKEESFNVKTLKQSLKEK 164
>SB_12964| Best HMM Match : RVT_1 (HMM E-Value=5.6e-31)
Length = 1273
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 341 RRNEESASIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRT 493
+R+E S I S +D +S+L D + G + +L ++ELS +RT
Sbjct: 840 QRDENSPGIWTSSNQDDSLVASNLEETDESDGDTSEVERLQHEVELSVLRT 890
>SB_35403| Best HMM Match : Lectin_C (HMM E-Value=1e-05)
Length = 2293
Score = 28.7 bits (61), Expect = 4.5
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 11/114 (9%)
Frame = +2
Query: 344 RNEESASIENKSGSEDINDSSSLRNVDGTK-----GVDPQKIKLDDKLELSRIRTDSVQ- 505
+N+ S +NK G D + + SLR+ D K D + +DDK + + D Q
Sbjct: 354 KNDSLKSRDNKKGRTDDSKNDSLRSRDDKKERPVVNRDDSQSSIDDKEKRPDVNKDESQR 413
Query: 506 -----EDVLRIQDDEETEEYSSKHVRPNTQTVTIKESTNQIQTRKTSLKRKLEE 652
E I D+ K RP+ + S + + R K+K E+
Sbjct: 414 SRDDKEKRPDINKDDSQRSRDDKEKRPDVNKDDSQSSIDDKEKRPDVNKQKNEK 467
>SB_49644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1615
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/69 (23%), Positives = 33/69 (47%)
Frame = +2
Query: 341 RRNEESASIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVLR 520
+R ++ + G SSS + ++ P+K + KL+L QE+++
Sbjct: 1422 KRKRRKKEVDEEKGKPARRPSSSSSTTNASEPAVPKKRRRKQKLKL--------QEELVN 1473
Query: 521 IQDDEETEE 547
++DD+E E+
Sbjct: 1474 VEDDDEEED 1482
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 28.3 bits (60), Expect = 6.0
Identities = 22/108 (20%), Positives = 52/108 (48%)
Frame = +2
Query: 350 EESASIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVLRIQD 529
E++ + SG+ D ND + R V+G ++ + + L + I T++ + + +
Sbjct: 176 EKNLQSSSASGA-DQNDQN--REVEGVVTGSIRENIVRNSLNTNSIETETHKNSLETKSN 232
Query: 530 DEETEEYSSKHVRPNTQTVTIKESTNQIQTRKTSLKRKLEEESAAGTS 673
DEE ++ N + ++ES+ + +++L +E++ A+ S
Sbjct: 233 DEENSNFNENSQEHNIDS-DVEESSKNKEANQSTLGNHIEKQEASRDS 279
>SB_18299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 698
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = +2
Query: 455 KLDDKLELSRIRTDSVQEDVLRIQDDEETEEYSSKHVRPNTQTVTIKESTNQIQTRKTSL 634
K+ D+ +R D ++ V+R + S + RP ++T + TN +TRK S
Sbjct: 403 KMSDQRGAEFVRGDQTRQQVVRHRGARRPRSSSVQTYRPESRTNRPESRTN--RTRKHSY 460
Query: 635 KRKLE 649
KLE
Sbjct: 461 DVKLE 465
>SB_52212| Best HMM Match : Rho_N (HMM E-Value=5.2e-05)
Length = 384
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 264 GEEGYSKK*FVAKVNPAMTVKILN*NEETKKV 359
G+EGY K F+ K+ P + +K++N ++ KV
Sbjct: 184 GQEGYGPKEFITKIRPKV-IKLVNDRKKPIKV 214
>SB_49459| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 413 RNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVLRIQD 529
RN+ GTKG +++ +L +R D DVL ++D
Sbjct: 655 RNIIGTKGAKAISKVIENSCKLKYLRIDHCNIDVLDVRD 693
>SB_18379| Best HMM Match : Rho_N (HMM E-Value=5.2e-05)
Length = 398
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 264 GEEGYSKK*FVAKVNPAMTVKILN*NEETKKV 359
G+EGY K F+ K+ P + +K++N ++ KV
Sbjct: 352 GQEGYGPKEFITKIRPKV-IKLVNDRKKPIKV 382
>SB_15824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1258
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 264 GEEGYSKK*FVAKVNPAMTVKILN*NEETKKV 359
G+EGY K F+ K+ P + +K++N ++ KV
Sbjct: 232 GQEGYGPKEFITKIRPKV-IKLVNDRKKPIKV 262
>SB_13773| Best HMM Match : TolA (HMM E-Value=0.042)
Length = 1558
Score = 27.9 bits (59), Expect = 7.9
Identities = 24/116 (20%), Positives = 54/116 (46%), Gaps = 3/116 (2%)
Frame = +2
Query: 335 LERRNEESASIENKSGSEDINDSSSLRN-VDGTKGVDPQKIKLDDKLELSRIRTDSVQED 511
LE+ E A +EN+ + +IN S + N + KG ++++ + K +L +++ +E
Sbjct: 528 LEKHTLECAQLENELRTNEINAISEVLNEFEQKKGEALRQLQAELKDKLKNAKSEEEKEA 587
Query: 512 VLRIQDDEET--EEYSSKHVRPNTQTVTIKESTNQIQTRKTSLKRKLEEESAAGTS 673
++ + T ++ + + + V + +++ +K R E AAG S
Sbjct: 588 LIMEYGQKMTKVQDEIEQQKQKKLRDVRKRLRAERLRRKKELHSRHAAEARAAGIS 643
>SB_9305| Best HMM Match : Autophagy_N (HMM E-Value=5.5)
Length = 469
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 512 VLRIQDDEETEEYSSKHVRPNTQTVTIKESTNQIQTRKTS 631
V++I +DE E SSK + NTQ V+++ ST + T+
Sbjct: 11 VVQILEDE-AESSSSKPLNKNTQNVSMQSSTRNTFCKSTA 49
>SB_4911| Best HMM Match : LRR_1 (HMM E-Value=0.12)
Length = 194
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 413 RNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVLRIQD 529
RN+ GTKG +++ +L +R D DVL ++D
Sbjct: 16 RNIIGTKGAKAISKVIENSCKLKYLRIDHCNIDVLGVRD 54
>SB_58447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 731
Score = 27.9 bits (59), Expect = 7.9
Identities = 21/89 (23%), Positives = 40/89 (44%)
Frame = +2
Query: 386 EDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVLRIQDDEETEEYSSKHV 565
+++ D S+ V G DP+ L K+E +R +E +L + D EE +
Sbjct: 544 KELEDPSNEERVRLLSGADPEPDILAKKIEELELRLAEKEEKLL--EKDLIFEEVTRLAD 601
Query: 566 RPNTQTVTIKESTNQIQTRKTSLKRKLEE 652
R + T KE T ++ + + K+++
Sbjct: 602 RTKNKAETGKEDTLELAKKVNEYQAKIKD 630
>SB_57637| Best HMM Match : SRP40_C (HMM E-Value=2.3e-08)
Length = 654
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +2
Query: 449 KIKLDDKLELSRIRTDSVQEDVLRIQDDEETEEYSSKHVRPNTQTVTIKESTN 607
K K DDK++ + + +S ED DD+E E+ K V +T +ES++
Sbjct: 14 KKKADDKVKKTPAKQESSSED--DSSDDDEEEKSKKKAVSKEKKTPAKQESSS 64
>SB_46327| Best HMM Match : Rho_N (HMM E-Value=4.2e-05)
Length = 856
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 264 GEEGYSKK*FVAKVNPAMTVKILN*NEETKKV 359
G+EGY K F+ K+ P + +K++N ++ KV
Sbjct: 232 GQEGYGPKEFITKIRPKV-IKLVNDRKKPIKV 262
>SB_19314| Best HMM Match : Rho_N (HMM E-Value=5.2e-05)
Length = 708
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 264 GEEGYSKK*FVAKVNPAMTVKILN*NEETKKV 359
G+EGY K F+ K+ P + +K++N ++ KV
Sbjct: 232 GQEGYGPKEFITKIRPKV-IKLVNDRKKPIKV 262
>SB_13431| Best HMM Match : Seryl_tRNA_N (HMM E-Value=2.3)
Length = 743
Score = 27.9 bits (59), Expect = 7.9
Identities = 26/108 (24%), Positives = 52/108 (48%)
Frame = +2
Query: 338 ERRNEESASIENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDDKLELSRIRTDSVQEDVL 517
E ++++ I++KSG E++ + TK V + L+++ ELS S +++ +
Sbjct: 422 EIQDDDIDDIDDKSGDEEL-----ISKQGKTKKVFDKMNFLEEEAELSGSDVGSDEDEDI 476
Query: 518 RIQDDEETEEYSSKHVRPNTQTVTIKESTNQIQTRKTSLKRKLEEESA 661
DD+E EE S + P+ + Q Q K +K ++++ A
Sbjct: 477 N-TDDDELEEDSDQEELPSDHEL-------QKQINKVHMKTMMDQDKA 516
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,527,883
Number of Sequences: 59808
Number of extensions: 323855
Number of successful extensions: 1243
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1233
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1733301648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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