Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10j18
         (675 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   2.0  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   3.5  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                22   4.7  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              21   8.1  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    21   8.1  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -3

Query: 151 YLMIYLTNEQLLHVTDHDSDVSLIACSTTSSTGLGF 44
           Y  + L NEQ    T HD  V+L +  T +ST LGF
Sbjct: 143 YTNLGLVNEQ--GQTWHDLRVALTSELTAASTVLGF 176


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = +2

Query: 368  ENKSGSEDINDSSSLRNVDGTKGVDPQKIKLDD 466
            EN+ G+ D +D+ ++   +      P  I++DD
Sbjct: 955  ENEIGASDPSDTVTIITAEEAPSGPPTSIRVDD 987


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = +2

Query: 527 DDEETEEYSSKHVRPNTQTVTIKESTNQIQTRKTSL 634
           DDE    Y + + +  +Q +T + +TN++ T+  +L
Sbjct: 278 DDEFKGTYKTLYKQMWSQNITERPTTNEVITKIDTL 313


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -2

Query: 35  KHVTLHFCVD 6
           +H+TLH C D
Sbjct: 102 RHITLHHCYD 111


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -2

Query: 35  KHVTLHFCVD 6
           +H+TLH C D
Sbjct: 102 RHITLHHCYD 111


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,150
Number of Sequences: 438
Number of extensions: 2978
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)