Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10j17
(696 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38518| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_16245| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.061) 32 0.51
SB_22245| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.67
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 31 0.67
SB_18656| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.89
SB_1652| Best HMM Match : Keratin_B2 (HMM E-Value=0.031) 31 0.89
SB_44591| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_14120| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_52750| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_29587| Best HMM Match : zf-XS (HMM E-Value=8.9) 30 2.1
SB_7619| Best HMM Match : ArfGap (HMM E-Value=5.3) 30 2.1
SB_1653| Best HMM Match : ABC_tran (HMM E-Value=0) 30 2.1
SB_50209| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_14853| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_46132| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_44113| Best HMM Match : CAT (HMM E-Value=0.62) 29 2.7
SB_33504| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_31487| Best HMM Match : HSP9_HSP12 (HMM E-Value=7.7) 29 3.6
SB_29778| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_45939| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00051) 29 4.8
SB_28873| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_25706| Best HMM Match : Mak16 (HMM E-Value=2.8) 28 6.3
SB_24125| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) 28 6.3
SB_49282| Best HMM Match : HEAT (HMM E-Value=0.016) 28 8.3
SB_42009| Best HMM Match : DUF1531 (HMM E-Value=6.1) 28 8.3
SB_39950| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_29894| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_14494| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_13504| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_8256| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_54| Best HMM Match : Actin (HMM E-Value=0) 28 8.3
SB_57293| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_50891| Best HMM Match : CsbD (HMM E-Value=3.4) 28 8.3
SB_33063| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_13278| Best HMM Match : zf-CHC2 (HMM E-Value=6.8) 28 8.3
>SB_38518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1399
Score = 33.1 bits (72), Expect = 0.22
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Frame = +3
Query: 234 NKYEIIEHNSHTNRTETKQGKRDFSIETEICILRRHY-GNKRNKISDKTKSK-YSIGGKD 407
NK IIE N++ + ++ S+ + +R+ + G +R+ + + +S GKD
Sbjct: 1026 NKNIIIEWNNNNEKENVMDNDQNKSLTSTSKEIRKGFVGPERSTYPPSSLEEVFSSDGKD 1085
Query: 408 INNEEVKNDGSACGDNENKESTKSRKDVTRILLDN 512
++EVK +G A E ++S + D R L DN
Sbjct: 1086 YMHQEVKKEGVARYSTETRDSYAAPTDSWR-LSDN 1119
>SB_16245| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.061)
Length = 220
Score = 31.9 bits (69), Expect = 0.51
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 8/90 (8%)
Frame = +3
Query: 264 HTNRTETKQGKRDFSIETEICILRRHY----GNKRNKISDKT----KSKYSIGGKDINNE 419
H+ R+E + + D E E+ L+R Y G++R + K + +I NE
Sbjct: 5 HSRRSEASEAEMDGIAEQELAKLQRQYRIMEGDRRAYGEESQNVIKKQRDTIQWLQKENE 64
Query: 420 EVKNDGSACGDNENKESTKSRKDVTRILLD 509
E+ D G N+N+ + LLD
Sbjct: 65 ELMKDNRLAGSNQNQSKDNTNTSTLAELLD 94
>SB_22245| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 95
Score = 31.5 bits (68), Expect = 0.67
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = +3
Query: 123 TMGKLKEVCEDAKVIYKKSHNTMTTQSRTCSGFSQYQNKYEIIEHNSHTNRTETKQGKRD 302
T ++++ + + I K + +T S TC YQ + ++++H + R QGK +
Sbjct: 13 TYFNIRDMPGEYRKIKGKRKSRLTLTSETCLANIGYQGREDLLKHQRYARRISKDQGKEE 72
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 31.5 bits (68), Expect = 0.67
Identities = 16/59 (27%), Positives = 33/59 (55%)
Frame = +3
Query: 354 RNKISDKTKSKYSIGGKDINNEEVKNDGSACGDNENKESTKSRKDVTRILLDNLKGLIN 530
RN+ DK K + + ++++ ND + ++E++ S++S ++ T+I KGL N
Sbjct: 422 RNQRKDKAKREPTPESSSDSSDDSSNDSDSGSESEDESSSESAEENTKISSSVKKGLQN 480
>SB_18656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3292
Score = 31.1 bits (67), Expect = 0.89
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +3
Query: 342 YGNKRNKISDKTKSKYSIGGKDINNEEVKNDGSACGDNENKESTKSRKD 488
+GN N I+ T + SIG + NN ND DN+N + D
Sbjct: 1667 FGNN-NAIATSTTTSTSIGNNNNNNNNNNNDNDNDNDNDNDNDNDNDND 1714
>SB_1652| Best HMM Match : Keratin_B2 (HMM E-Value=0.031)
Length = 563
Score = 31.1 bits (67), Expect = 0.89
Identities = 29/120 (24%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Frame = +3
Query: 87 KIIDELLAEYTITMGKLKEVCEDAKVIYKKSHNTMTTQSRTCSGFSQYQNKYEIIEHNSH 266
K++D +T +G + + KV+ TQ+R SG +N +++ N+
Sbjct: 57 KVLDNTQTRHTCGVGNMNNGNKRTKVL-------CNTQTRHTSGVGNMKNGNNVLD-NTQ 108
Query: 267 TNRTETKQGKRDFSIETEIC--ILRRHY--------GNKRNKISDKTKSKYSIGGKDINN 416
T T + + T++ RH GNKR K+ D T+++++ G +INN
Sbjct: 109 TRHTSGVGNINNGNKRTKVLDNTQTRHTSGVGNMNNGNKRTKVLDNTQTRHTGGVGNINN 168
Score = 29.5 bits (63), Expect = 2.7
Identities = 10/26 (38%), Positives = 20/26 (76%)
Frame = +3
Query: 345 GNKRNKISDKTKSKYSIGGKDINNEE 422
GNKR K+ D T+++++ G ++NN++
Sbjct: 217 GNKRTKVLDNTQTRHTSGVGNMNNDD 242
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +3
Query: 345 GNKRNKISDKTKSKYSIGGKDINN 416
GNKR K+ D T+++++ G +INN
Sbjct: 169 GNKRTKVLDNTQTRHTSGVGNINN 192
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 345 GNKRNKISDKTKSKYSIGGKDINN 416
GNKR K+ D T+++++ G ++NN
Sbjct: 52 GNKRTKVLDNTQTRHTCGVGNMNN 75
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 345 GNKRNKISDKTKSKYSIGGKDINN 416
GNKR K+ D T+++++ G ++NN
Sbjct: 193 GNKRTKVLDNTQTRHTSGVGNMNN 216
>SB_44591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 292
Score = 30.7 bits (66), Expect = 1.2
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 12/94 (12%)
Frame = +3
Query: 171 KKSHNTMTTQSRTCSGFSQYQN--KYEIIEHNSHTNRTETKQGKRDFSIETEIC--ILRR 338
K++ TQ+R SG N K + N+ T T D + T++ L R
Sbjct: 6 KRTEVLCNTQTRHTSGVGNMNNGNKRTKVLDNTQTRHTSGVGNMNDGNKRTKVLDNTLTR 65
Query: 339 HY--------GNKRNKISDKTKSKYSIGGKDINN 416
H GNKR I D T+++++ G +INN
Sbjct: 66 HTSGVGNMNDGNKRTTILDNTQTRHTSGVGNINN 99
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 12/86 (13%)
Frame = +3
Query: 195 TQSRTCSGFSQYQN--KYEIIEHNSHTNRTETKQGKRDFSIETEI-CILR-RHY------ 344
TQ+R SG N K ++ N+ T T + + T++ C + RH
Sbjct: 110 TQTRHTSGVGNINNGNKRTMVLDNTQTRHTSGVGNTNNVNKRTKVLCNTQTRHTSGVGNT 169
Query: 345 --GNKRNKISDKTKSKYSIGGKDINN 416
GNKR K+ D T+++++ G ++NN
Sbjct: 170 NNGNKRTKVLDNTQTRHTSGVANMNN 195
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +3
Query: 345 GNKRNKISDKTKSKYSIGGKDINN 416
GNKR K+ D T+++++ G +INN
Sbjct: 220 GNKRTKVLDNTQTRHTGGVGNINN 243
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 345 GNKRNKISDKTKSKYSIGGKDINN 416
GNKR K+ D T+++++ G ++NN
Sbjct: 268 GNKRTKVLDNTQTRHTSGVGNMNN 291
>SB_14120| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 292
Score = 30.3 bits (65), Expect = 1.6
Identities = 26/120 (21%), Positives = 55/120 (45%), Gaps = 10/120 (8%)
Frame = +3
Query: 87 KIIDELLAEYTITMGKLKEVCEDAKVIYKKSHNTMTTQSRTCSGFSQYQNKYEIIEHNSH 266
K++D +T +G + + + KV+ NT T + + + ++++ N+
Sbjct: 57 KVLDNTQTRHTSGVGNMNDGNKRTKVL----DNTQTRHTSGVGNMNNSNKRTKVLD-NTQ 111
Query: 267 TNRTETKQGKRDFSIETEI-CILR-RHY--------GNKRNKISDKTKSKYSIGGKDINN 416
T T + + T++ C + RH GNKR K+ D T+++++ G ++NN
Sbjct: 112 TRHTSGVGNMNNGNKRTKVLCNTQTRHTSGVGNMNNGNKRTKVLDNTQTRHTSGVGNMNN 171
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 12/86 (13%)
Frame = +3
Query: 195 TQSRTCSGFSQYQN--KYEIIEHNSHTNRTETKQGKRDFSIETEIC--ILRRHY------ 344
TQ+R SG N K ++ N+ T T D + T++ RH
Sbjct: 158 TQTRHTSGVGNMNNGNKRTMVLDNTQTRHTSGVGNMNDGNKRTKVLDNTQTRHTSGVGNM 217
Query: 345 --GNKRNKISDKTKSKYSIGGKDINN 416
GNKR K+ D T+++++ G ++NN
Sbjct: 218 NNGNKRTKVLDNTQTRHTSGMGNMNN 243
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 345 GNKRNKISDKTKSKYSIGGKDINN 416
GNKR K+ D T+++++ G ++NN
Sbjct: 4 GNKRTKVLDNTQTRHTSGVGNMNN 27
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 345 GNKRNKISDKTKSKYSIGGKDINN 416
GNKR K+ D T+++++ G ++NN
Sbjct: 268 GNKRTKVLDNTQTRHTSGVGNMNN 291
>SB_52750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 287
Score = 29.9 bits (64), Expect = 2.1
Identities = 10/24 (41%), Positives = 19/24 (79%)
Frame = +3
Query: 345 GNKRNKISDKTKSKYSIGGKDINN 416
GNKR K+ D T+++++ G +++NN
Sbjct: 28 GNKRTKVLDNTQTRHTCGVRNMNN 51
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 345 GNKRNKISDKTKSKYSIGGKDINN 416
GNKR K+ D T+++++ G ++NN
Sbjct: 100 GNKRTKVLDNTQTRHTSGVGNMNN 123
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 345 GNKRNKISDKTKSKYSIGGKDINN 416
GNKR K+ D T+++++ G ++NN
Sbjct: 124 GNKRTKVLDNTQTRHTSGVGNMNN 147
>SB_29587| Best HMM Match : zf-XS (HMM E-Value=8.9)
Length = 254
Score = 29.9 bits (64), Expect = 2.1
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
Frame = +3
Query: 171 KKSHNTMTTQSRTCSGFSQYQNKYEIIE--HNSHTNRTETKQGKRDFSIETEIC--ILRR 338
K++ TQ+R SG N Y+ + N+ T T + + T++ R
Sbjct: 30 KRTKVLCNTQTRHTSGVGNMNNGYKRTKVLDNTQTRHTSGVGNMNNGNKRTKVLDNTQTR 89
Query: 339 H--------YGNKRNKISDKTKSKYSIGGKDINN 416
H GNKR K+ D T+++++ G +INN
Sbjct: 90 HTSGVGNMNIGNKRTKVLDNTQTRHTSGVGNINN 123
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 345 GNKRNKISDKTKSKYSIGGKDINN 416
GNKR K+ D T+++++ G ++NN
Sbjct: 148 GNKRTKVLDNTQTRHTSGVGNMNN 171
>SB_7619| Best HMM Match : ArfGap (HMM E-Value=5.3)
Length = 483
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +3
Query: 93 IDELLAEYTITMGKLKEVCEDAKVIYKKSHNTMTTQSRTCSGFSQYQNKYEIIEHNSHTN 272
+ +L+A Y + ++ V E A + Y T+T R F Y+NKY + EHN N
Sbjct: 392 VQDLVAIYCVL---IRSVVEYAGLRYSIRRITVTLSPRRA--FGNYKNKYPVDEHNPLRN 446
>SB_1653| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1702
Score = 29.9 bits (64), Expect = 2.1
Identities = 27/120 (22%), Positives = 54/120 (45%), Gaps = 10/120 (8%)
Frame = +3
Query: 87 KIIDELLAEYTITMGKLKEVCEDAKVIYKKSHNTMTTQSRTCSGFSQYQNKYEIIEHNSH 266
K++D +T +G + + KV+ NT T + + + ++++ N+
Sbjct: 297 KVLDNTQTRHTSGVGNINNGNKRTKVL----DNTQTRNTSGVGNINNGNKRTKVLD-NTQ 351
Query: 267 TNRTETKQGKRDFSIETEI-CILR-RHY--------GNKRNKISDKTKSKYSIGGKDINN 416
T T + + T++ C + RH GNKR K+ D T+++++ G +INN
Sbjct: 352 TRHTSGVGNMNNGNKRTKVLCNTQTRHTSGVGNMNNGNKRTKVLDNTQTRHTNGVGNINN 411
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +3
Query: 345 GNKRNKISDKTKSKYSIGGKDINN 416
GNKR K+ D T+++++ G +INN
Sbjct: 268 GNKRTKVLDNTQTRHTSGVGNINN 291
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +3
Query: 345 GNKRNKISDKTKSKYSIGGKDINN 416
GNKR K+ D T+++++ G +INN
Sbjct: 292 GNKRTKVLDNTQTRHTSGVGNINN 315
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 345 GNKRNKISDKTKSKYSIGGKDINN 416
GNKR K+ D T+++++ G ++NN
Sbjct: 244 GNKRTKVLDNTQTRHTSGVGNMNN 267
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 345 GNKRNKISDKTKSKYSIGGKDINN 416
GNKR K+ D T+++++ G ++NN
Sbjct: 412 GNKRTKVLDNTQTRHTSGVGNMNN 435
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 345 GNKRNKISDKTKSKYSIGGKDINN 416
GNKR K+ D T+++++ G ++NN
Sbjct: 436 GNKRTKVLDNTQTRHTSGVGNMNN 459
>SB_50209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 473
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Frame = +3
Query: 249 IEHNSHTNRTETKQGKRDFSIETEICILRRHYGNKRNKISDKTKSKYSIGGKDINNE--- 419
+++NSH N + K D + E N ++ +D KS + + NN+
Sbjct: 328 VDNNSHNNDEKNKSNSNDNNDENNNNNSNNKDSNNKSNNNDN-KSNSNNTENNSNNDGFD 386
Query: 420 -EVKNDGSACGDNENKESTKSRKDVT 494
++ND +A + NK+ + K T
Sbjct: 387 NSIRNDNNAGNKSNNKDEKNNSKGTT 412
>SB_14853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 412
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/48 (29%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = +3
Query: 345 GNKRNKISDKTKSKYSIGGKDIN--NEEVKNDGSACGDNENKESTKSR 482
GNKR K+ D T+++++ G ++N N+ K ++ DN N + +++
Sbjct: 172 GNKRTKVLDNTQTRHTSGVGNMNNGNKRTKTRHTSGVDNMNNGNKRTK 219
Score = 29.5 bits (63), Expect = 2.7
Identities = 21/110 (19%), Positives = 46/110 (41%)
Frame = +3
Query: 87 KIIDELLAEYTITMGKLKEVCEDAKVIYKKSHNTMTTQSRTCSGFSQYQNKYEIIEHNSH 266
K++D +T +G + + K + + M ++ Q ++ N +
Sbjct: 177 KVLDNTQTRHTSGVGNMNNGNKRTKTRHTSGVDNMNNGNKRTKVLCNTQTRHTSGVGNMN 236
Query: 267 TNRTETKQGKRDFSIETEICILRRHYGNKRNKISDKTKSKYSIGGKDINN 416
+ TK + T + + GNKR K+ D T+++++ G ++NN
Sbjct: 237 NSNKRTKVLDNTQTRHTG-GVGNMNNGNKRTKVLDNTQTRHTSGVGNMNN 285
Score = 29.1 bits (62), Expect = 3.6
Identities = 26/120 (21%), Positives = 52/120 (43%), Gaps = 10/120 (8%)
Frame = +3
Query: 87 KIIDELLAEYTITMGKLKEVCEDAKVIYKKSHNTMTTQSRTCSGFSQYQNKYEIIEHNSH 266
K++D +T +G + + KV+ NT T + + + E+++ N+
Sbjct: 33 KVLDNTQTRHTSGVGNMNNGNKRTKVLC----NTPTMHTSGVGNMNNSNKRTEVLD-NTQ 87
Query: 267 TNRTETKQGKRDFSIETEIC--ILRRHY--------GNKRNKISDKTKSKYSIGGKDINN 416
T T + + T++ RH GNKR K+ D T+++++ G ++NN
Sbjct: 88 TRHTSGVGNMNNGNKRTKVLDNTQTRHTSGVGNMNNGNKRTKVLDNTQTRHTSGVGNMNN 147
Score = 28.7 bits (61), Expect = 4.8
Identities = 26/120 (21%), Positives = 52/120 (43%), Gaps = 10/120 (8%)
Frame = +3
Query: 87 KIIDELLAEYTITMGKLKEVCEDAKVIYKKSHNTMTTQSRTCSGFSQYQNKYEIIEHNSH 266
K++D +T +G + + KV+ NT T + + + ++++ N+
Sbjct: 267 KVLDNTQTRHTSGVGNMNNGNKRTKVL----DNTQTRHTSGVGNMNNGNKRTKVLD-NTQ 321
Query: 267 TNRTETKQGKRDFSIETEIC--ILRRHY--------GNKRNKISDKTKSKYSIGGKDINN 416
T T + + T++ RH GNKR K+ D T+++++ G +INN
Sbjct: 322 TRHTSGVGNMNNGNKRTKVLDNTQTRHTSGVGNMNNGNKRTKVLDNTQTRHTGGVGNINN 381
>SB_46132| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 29.5 bits (63), Expect = 2.7
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Frame = +3
Query: 180 HNTMTTQSRTCSGFSQYQNKYEIIEHNSHTNRTETKQGKRDFSIETEICILRRHYGN-KR 356
H++ T +G + + K E +HNS + ET D +ET LRR K
Sbjct: 841 HSSQNGDFETSNG--KLRKKREKPKHNSPDSEVETSDSSSDDEVETSDRQLRRKSEKPKY 898
Query: 357 NKISDKTKSKYSI--GGKDINNEEV--KNDGSACGDNE----NKESTKSRK 485
N + ++ YS G + ++ E+ K + + D+E NK K RK
Sbjct: 899 NSPDSEGETSYSSSDGEFETSDRELLKKREKDSSSDDELDRANKHQQKKRK 949
>SB_44113| Best HMM Match : CAT (HMM E-Value=0.62)
Length = 344
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +3
Query: 384 KYSIGGKDINNEEV-KNDGSACGDNENKESTKSRKDVTRILLDNLKGLIN 530
KYSIG D N V K + D NK+ + K + + +N+ G+I+
Sbjct: 168 KYSIGSPDYTNGGVIKINRKPINDFLNKKGNYNHKSLDSLFFENIPGIIH 217
>SB_33504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 200
Score = 29.1 bits (62), Expect = 3.6
Identities = 26/120 (21%), Positives = 52/120 (43%), Gaps = 10/120 (8%)
Frame = +3
Query: 87 KIIDELLAEYTITMGKLKEVCEDAKVIYKKSHNTMTTQSRTCSGFSQYQNKYEIIEHNSH 266
K++D +T +G + + KV+ NT T + + + E+++ N+
Sbjct: 9 KVLDNTQTRHTSGVGNMNNGNKRTKVLC----NTPTMHTSGVGNMNNSNKRTEVLD-NTQ 63
Query: 267 TNRTETKQGKRDFSIETEIC--ILRRHY--------GNKRNKISDKTKSKYSIGGKDINN 416
T T + + T++ RH GNKR K+ D T+++++ G ++NN
Sbjct: 64 TRHTSGVGNMNNGNKRTKVLDNTQTRHTSGVGNMNNGNKRTKVLDNTQTRHTSGVGNMNN 123
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 345 GNKRNKISDKTKSKYSIGGKDINN 416
GNKR K+ D T+++++ G ++NN
Sbjct: 148 GNKRTKVLDNTQTRHTSGVGNMNN 171
>SB_31487| Best HMM Match : HSP9_HSP12 (HMM E-Value=7.7)
Length = 122
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +3
Query: 159 KVIYKKSHNTMTTQS-RTCSGFSQYQNKYEIIEHNSHTNRTETKQGKRDFSIETEICILR 335
K+ ++ N+MT S T ++Y+NK + ++ TNR TK ++ S+
Sbjct: 20 KMTKNRNKNSMTASSDETTRKMTKYRNKNSLTASSNETNRKMTKYRNKN-SLTASSNKTN 78
Query: 336 RHYGNKRNKIS 368
R RNK S
Sbjct: 79 RKMTKNRNKNS 89
>SB_29778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 687
Score = 29.1 bits (62), Expect = 3.6
Identities = 27/120 (22%), Positives = 54/120 (45%), Gaps = 10/120 (8%)
Frame = +3
Query: 87 KIIDELLAEYTITMGKLKEVCEDAKVIYKKSHNTMTTQSRTCSGFSQYQNKYEIIEHNSH 266
K++ +T +G + + KV+Y NT T + + + ++++ N+
Sbjct: 177 KVLCNTQTRHTSGVGNMNNGNKRTKVLY----NTQTRHTSGVGNINNGNKRTKVLD-NTQ 231
Query: 267 TNRTETKQGKRDFSIETEI-CILR-RHY--------GNKRNKISDKTKSKYSIGGKDINN 416
T T + + T++ C + RH GNKR K+ D T+++++ G +INN
Sbjct: 232 TRHTSGVGNMNNGNKRTKVLCNTQTRHTSGVGNINNGNKRTKVLDYTQTRHTSGVGNINN 291
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +3
Query: 345 GNKRNKISDKTKSKYSIGGKDINN 416
GNKR K+ D T+++++ G +INN
Sbjct: 652 GNKRTKVLDNTQTRHTSGVGNINN 675
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 345 GNKRNKISDKTKSKYSIGGKDINN 416
GNKR K+ D T+++++ G ++NN
Sbjct: 4 GNKRTKVLDNTQTRHTSGVGNMNN 27
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 345 GNKRNKISDKTKSKYSIGGKDINN 416
GNKR K+ D T+++++ G ++NN
Sbjct: 316 GNKRTKVLDNTQTRHTSGVGNMNN 339
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 345 GNKRNKISDKTKSKYSIGGKDINN 416
GNKR K+ D T+++++ G ++NN
Sbjct: 340 GNKRTKVLDNTQTRHTSGVGNMNN 363
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 345 GNKRNKISDKTKSKYSIGGKDINN 416
GNKR K+ D T+++++ G ++NN
Sbjct: 364 GNKRTKVLDNTQTRHTSGVGNMNN 387
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 345 GNKRNKISDKTKSKYSIGGKDINN 416
GNKR K+ D T+++++ G ++NN
Sbjct: 388 GNKRTKVLDNTQTRHTSGVGNMNN 411
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 345 GNKRNKISDKTKSKYSIGGKDINN 416
GNKR K+ D T+++++ G ++NN
Sbjct: 484 GNKRTKVLDNTQTRHTSGVGNMNN 507
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 345 GNKRNKISDKTKSKYSIGGKDINN 416
GNKR K+ D T+++++ G ++NN
Sbjct: 508 GNKRTKVLDNTQTRHTSGVGNMNN 531
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 345 GNKRNKISDKTKSKYSIGGKDINN 416
GNKR K+ D T+++++ G ++NN
Sbjct: 556 GNKRTKVLDNTQTRHTSGVGNMNN 579
>SB_45939| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00051)
Length = 575
Score = 28.7 bits (61), Expect = 4.8
Identities = 24/104 (23%), Positives = 51/104 (49%)
Frame = +3
Query: 219 FSQYQNKYEIIEHNSHTNRTETKQGKRDFSIETEICILRRHYGNKRNKISDKTKSKYSIG 398
F+ Q + +++ +H NRT K+ ++ +I T I R R + + KT +
Sbjct: 78 FASVQEENSVLQMAAH-NRTVPKR-RKSLNISTIISGDGRPVRLARVQETSKTPNHVPSP 135
Query: 399 GKDINNEEVKNDGSACGDNENKESTKSRKDVTRILLDNLKGLIN 530
+ E KN+ + DN++++ ++++ TR+ +G+IN
Sbjct: 136 AEPTETIEEKNNEND-SDNDDQQVFRTKRQCTRLRRGVAQGVIN 178
>SB_28873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 176
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +3
Query: 345 GNKRNKISDKTKSKYSIGGKDINN 416
GNKR K+ D T+++++ G +INN
Sbjct: 4 GNKRTKVLDNTQTRHTGGVGNINN 27
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 345 GNKRNKISDKTKSKYSIGGKDINN 416
GNKR K+ D T+++++ G ++NN
Sbjct: 28 GNKRTKVLDNTQTRHTSGVGNMNN 51
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 345 GNKRNKISDKTKSKYSIGGKDINN 416
GNKR K+ D T+++++ G ++NN
Sbjct: 52 GNKRTKVLDNTQTRHTSGVGNMNN 75
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 345 GNKRNKISDKTKSKYSIGGKDINN 416
GNKR K+ D T+++++ G ++NN
Sbjct: 100 GNKRTKVLDNTQTRHTSGVGNMNN 123
>SB_25706| Best HMM Match : Mak16 (HMM E-Value=2.8)
Length = 405
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +3
Query: 264 HTNRTETKQGKRDFSIETEICILRRHYGNKRNKISDKTKSK 386
HT + E+K+ R ++ C+ + HY N + +T K
Sbjct: 320 HTQKGESKRSSRIRTLNRRSCVFKLHYTNLNRRDDVETNKK 360
>SB_24125| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 327
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 345 GNKRNKISDKTKSKYSIGGKDINN 416
GNKR K+ D T+++++ G ++NN
Sbjct: 196 GNKRTKVLDNTQTRHTSGVDNMNN 219
>SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 1026
Score = 28.3 bits (60), Expect = 6.3
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +3
Query: 300 DFSIETEICILRRHYGNKRNKISDKTKSKYSIGGKDI-NNEEVKNDGSACGDNENKESTK 476
+FSIE + + + +RNK K K S G+D+ N+E + + KE
Sbjct: 660 EFSIENSVALKAKQQRQQRNK--QKHKQMESQSGQDLQTNKEKRLKKRERRIQKRKEKQL 717
Query: 477 SRKDVTR 497
RKD T+
Sbjct: 718 RRKDQTK 724
>SB_49282| Best HMM Match : HEAT (HMM E-Value=0.016)
Length = 474
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/45 (31%), Positives = 28/45 (62%)
Frame = +3
Query: 51 HKTSCVRNAM*NKIIDELLAEYTITMGKLKEVCEDAKVIYKKSHN 185
H +S V + + I DE+L ++ T+G++ +VC+ A ++ K +N
Sbjct: 412 HLSSVVLESTGHVIDDEMLVKHLFTVGEVAQVCK-ASLLSTKFNN 455
>SB_42009| Best HMM Match : DUF1531 (HMM E-Value=6.1)
Length = 166
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +3
Query: 324 CILRRHYGNKRNKIS---DKTKSKYSIGGKDINNEEVKNDGSACGDNE 458
C +R Y KR + S D +S + + +E ++ DGS+ GD E
Sbjct: 59 CNEQRRYNKKRKRPSYDDDYKESSVDLDREGEQDEHLEQDGSSAGDTE 106
>SB_39950| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1249
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/104 (16%), Positives = 36/104 (34%)
Frame = +3
Query: 177 SHNTMTTQSRTCSGFSQYQNKYEIIEHNSHTNRTETKQGKRDFSIETEICILRRHYGNKR 356
++N S + S + N +N++ N T S + N
Sbjct: 12 NNNNNNNNSSSNSSSNNNNNNNNNNNNNNNNNNNNTTTNNNSNSSNNNNTTTNNNNSNSS 71
Query: 357 NKISDKTKSKYSIGGKDINNEEVKNDGSACGDNENKESTKSRKD 488
N ++ K+ + + NN N+ ++ N N S+ + +
Sbjct: 72 NNNNNNNKNNNNNNSNNNNNNSNTNNNNSNNSNNNNSSSNNNNN 115
>SB_29894| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 838
Score = 27.9 bits (59), Expect = 8.3
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +3
Query: 444 CGDNENKESTKS--RKDVTRILLDNLKGLINCLIQNYLLENGANNQRKATVLDSIFHQKE 617
C KE+ S R D+ R LDNLKG YL + ++K + +DSIF K
Sbjct: 306 CHGTNVKENVDSILRSDIYRSKLDNLKG--------YLKKEQGGFRKKHSTVDSIFILKT 357
Query: 618 V 620
V
Sbjct: 358 V 358
>SB_14494| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 27.9 bits (59), Expect = 8.3
Identities = 23/105 (21%), Positives = 44/105 (41%)
Frame = +3
Query: 174 KSHNTMTTQSRTCSGFSQYQNKYEIIEHNSHTNRTETKQGKRDFSIETEICILRRHYGNK 353
+S N + +G ++ E IE S R + K+ K+D + E + +
Sbjct: 36 QSENGLEQNENGSNGTGVEPSETEKIE--SEKKRKKEKKNKKDMETQ-ETLKTNNNKKIE 92
Query: 354 RNKISDKTKSKYSIGGKDINNEEVKNDGSACGDNENKESTKSRKD 488
++++DK K +D N+EE + S C + E + +D
Sbjct: 93 HHELADKNKKSKKKRKRDDNDEENNVESSPCKKVKGSEPGDTTED 137
>SB_13504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4924
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/51 (31%), Positives = 20/51 (39%)
Frame = +3
Query: 459 NKESTKSRKDVTRILLDNLKGLINCLIQNYLLENGANNQRKATVLDSIFHQ 611
NK ST KD+ IL + L NY+L N K L H+
Sbjct: 3313 NKRSTSEHKDINEILKRQVPALDKKFDINYILRKNIANISKTFDLTRALHE 3363
>SB_8256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 624
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 345 GNKRNKISDKTKSKYSIGGKDINN 416
GNKR K+ D T+++++ G ++NN
Sbjct: 457 GNKRTKVLDNTQTRHTSGVGNMNN 480
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 345 GNKRNKISDKTKSKYSIGGKDINN 416
GNKR K+ D T+++++ G ++NN
Sbjct: 481 GNKRTKVLDNTQTRHTSGVGNMNN 504
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +3
Query: 381 SKYSIGGKDINN-EEVKNDGSACGDNENKE 467
SK+S+ ++ N EE+K G C +ENK+
Sbjct: 1574 SKHSLDLLELTNPEEIKESGKHCASHENKD 1603
>SB_57293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1395
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +3
Query: 324 CILRRHYGNKRNKIS---DKTKSKYSIGGKDINNEEVKNDGSACGDNE 458
C +R Y KR + S D +S + + +E ++ DGS+ GD E
Sbjct: 1184 CNEQRRYNKKRKRPSYDDDYKESSVDLDREGEQDEHLEQDGSSAGDTE 1231
>SB_50891| Best HMM Match : CsbD (HMM E-Value=3.4)
Length = 311
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/73 (24%), Positives = 32/73 (43%)
Frame = +3
Query: 282 TKQGKRDFSIETEICILRRHYGNKRNKISDKTKSKYSIGGKDINNEEVKNDGSACGDNEN 461
T+QGK E C R NK K ++K + + + +N E + + + N
Sbjct: 148 TEQGKEAIEQGKEACEQERERLNKERKRANKDTERVNKETERVNKETERVNKER--ERVN 205
Query: 462 KESTKSRKDVTRI 500
KE ++ K+ R+
Sbjct: 206 KERKRANKETERV 218
>SB_33063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +3
Query: 345 GNKRNKISDKTKSKYSIGGKDINNEEVKNDGSA 443
GNKR K+ D T ++++ G ++NN + +A
Sbjct: 4 GNKRTKVLDNTHTRHTSGVGNMNNGNKRTKSNA 36
>SB_13278| Best HMM Match : zf-CHC2 (HMM E-Value=6.8)
Length = 152
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +3
Query: 237 KYEIIEHNSHTNRTETKQGKRDFSIETEICIL--RRHYGNKRNKISDKTKSKYSIGGKDI 410
+Y + T + ++ + D + E CIL +RH N N ++ + + +
Sbjct: 38 RYSRLHAEPSTTTHDDQRKEYDDLQQAEPCILPLKRHNNNNNNNNNNNNNNNNNNNNNNN 97
Query: 411 NNEEVKNDGSACGDNENKESTKSRKD 488
NN N+ + +N N + + +
Sbjct: 98 NNNNNNNNNNNNNNNNNNNNNNNNNN 123
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,552,100
Number of Sequences: 59808
Number of extensions: 315248
Number of successful extensions: 1242
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1205
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1817559367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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