Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10j17
(696 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g13250.1 68416.m01668 hypothetical protein low similarity to ... 33 0.18
At5g23150.1 68418.m02707 PWWP domain-containing protein identica... 32 0.32
At1g06190.1 68414.m00651 expressed protein 31 0.55
At1g03230.1 68414.m00301 extracellular dermal glycoprotein, puta... 30 1.3
At5g39700.1 68418.m04807 myb family transcription factor (MYB89)... 30 1.7
At3g27860.1 68416.m03474 PWWP domain-containing protein 30 1.7
At2g28890.1 68415.m03511 protein phosphatase 2C family protein /... 30 1.7
At1g73875.1 68414.m08555 endonuclease/exonuclease/phosphatase fa... 28 5.1
At1g33480.1 68414.m04144 zinc finger (C3HC4-type RING finger) fa... 28 5.1
At1g13160.1 68414.m01526 SDA1 family protein contains Pfam PF052... 28 5.1
At3g61540.1 68416.m06893 peptidase family protein similar to pro... 28 6.8
At3g28770.1 68416.m03591 expressed protein 28 6.8
At2g27150.1 68415.m03263 aldehyde oxidase 3 (AAO3) identical to ... 28 6.8
At4g10160.1 68417.m01662 zinc finger (C3HC4-type RING finger) fa... 27 9.0
At4g05380.1 68417.m00820 AAA-type ATPase family protein contains... 27 9.0
At3g02810.1 68416.m00273 protein kinase family protein contains ... 27 9.0
>At3g13250.1 68416.m01668 hypothetical protein low similarity to
SP|P07271 DNA repair and recombination protein PIF1,
mitochondrial precursor {Saccharomyces cerevisiae}
Length = 1419
Score = 33.1 bits (72), Expect = 0.18
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = +3
Query: 360 KISDKTKSKYS-IGGKDINNEEVKNDGSACGDNENKESTKSRKDVTRILLDNLKGLINCL 536
K D +KYS + D NE V+N + G N STK +K++ + L+D + ++N
Sbjct: 100 KPKDGDYAKYSQLYIVDTENE-VENRANVIGKGNNGSSTKGKKNLNKQLIDAIIKMLN-Q 157
Query: 537 IQNYLLENGANNQRKATVLDSIFHQKEV 620
+ Y+ + + +R + D FH + V
Sbjct: 158 VNPYVEKFRSARERIDSTNDEPFHMRIV 185
>At5g23150.1 68418.m02707 PWWP domain-containing protein identical
to cDNA putative transcription factor (HUA2) GI:4868119;
contains Pfam profile PF00855: PWWP domain
Length = 1392
Score = 32.3 bits (70), Expect = 0.32
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +3
Query: 243 EIIEHNSHTNRTETKQGKRDFSIETEICILRRHYGNKRNKISDKTKSKYSIGGKDINNEE 422
E +EH+S + K K DF T+ H+GN + K+++ + K GG D E+
Sbjct: 195 ESLEHSSF----DPKIKKEDFDKGTDGSACNEHFGNGQKKLANGKRIKKEAGGSDRKGED 250
>At1g06190.1 68414.m00651 expressed protein
Length = 401
Score = 31.5 bits (68), Expect = 0.55
Identities = 14/65 (21%), Positives = 34/65 (52%)
Frame = +3
Query: 288 QGKRDFSIETEICILRRHYGNKRNKISDKTKSKYSIGGKDINNEEVKNDGSACGDNENKE 467
QGK ++++ + +LR+H G + + K S+ + G ++ ++ + G+ +N
Sbjct: 164 QGKESETVDSLLKLLRKHSGEQSKRQVSKFSSQGEVQGDTVDKQDRTGNLVTSGNKDNNA 223
Query: 468 STKSR 482
S+ +R
Sbjct: 224 SSFTR 228
>At1g03230.1 68414.m00301 extracellular dermal glycoprotein,
putative / EDGP, putative similar to extracellular
dermal glycoprotein EDGP precursor [Daucus carota]
GI:285741
Length = 434
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/34 (52%), Positives = 24/34 (70%)
Frame = -3
Query: 508 SSRIRVTSLRDLVLSLFSLSPHALPSFLTSSLLM 407
SSRI + S+ L+LS+FSLS A PSF +LL+
Sbjct: 3 SSRIIIFSV--LLLSIFSLSSSAQPSFRPKALLL 34
>At5g39700.1 68418.m04807 myb family transcription factor (MYB89)
identical to transcription factor (MYB89) GI:5823322
from [Arabidopsis thaliana]
Length = 190
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Frame = +3
Query: 270 NRTETKQGKRDFSIETEICILRRH--YGNKRNKIS 368
N+ + K KR+F+ E E +LR H YGNK +KI+
Sbjct: 100 NQLDPKINKRNFTDEEEEKLLRAHILYGNKWSKIA 134
>At3g27860.1 68416.m03474 PWWP domain-containing protein
Length = 652
Score = 29.9 bits (64), Expect = 1.7
Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 3/101 (2%)
Frame = +3
Query: 174 KSHNTMTTQSRTCSGFSQYQNKYEIIEHNSHTNRTETKQGKRDFSIETEICILRRHYGNK 353
K H + R CSGF+ + K + T + T + KR S ++I + N
Sbjct: 253 KEHESCQRLLRKCSGFASKKRKCGDVA----TTGSTTLRKKR-LSEVSKIETAEKEISNG 307
Query: 354 RNKISDKTKSKYSIGGKD---INNEEVKNDGSACGDNENKE 467
++ S K KSK + D I E ND + ++E K+
Sbjct: 308 KSLSSRKRKSKRGLDENDDDGIEKREESNDSNHLEESEKKD 348
>At2g28890.1 68415.m03511 protein phosphatase 2C family protein /
PP2C family protein similar to protein phosphatase-2c
(GI:3608412) [Mesembryanthemum crystallinum]; contains
Pfam PF00481 : Protein phosphatase 2C domain
Length = 654
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Frame = +3
Query: 345 GNKRNKISDKTKSKYSIGG--KDIN--NEEVKNDGSACGDNE 458
G+ R + K +S Y IG +D+ NEE ND CGD E
Sbjct: 426 GDSRAVLGQKAESDYWIGKIKQDLERINEETMNDFDGCGDGE 467
>At1g73875.1 68414.m08555 endonuclease/exonuclease/phosphatase
family protein contains Pfam profile PF03372:
Endonuclease/Exonuclease/phosphatase family
Length = 454
Score = 28.3 bits (60), Expect = 5.1
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 4/87 (4%)
Frame = +3
Query: 117 TITMGKLKEVCEDAKVIYKKSHN----TMTTQSRTCSGFSQYQNKYEIIEHNSHTNRTET 284
TIT K + E ++ +Y+KS+ T+ GFSQ K +S R T
Sbjct: 15 TITKRKRNSISEQSENVYEKSNRKESITLKPHRSFTPGFSQRDCKPVRHSKSSLRRRRRT 74
Query: 285 KQGKRDFSIETEICILRRHYGNKRNKI 365
K+ K S+E E ++ N +K+
Sbjct: 75 KE-KISSSVEREWVFSANNFENLADKL 100
>At1g33480.1 68414.m04144 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 508
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +3
Query: 117 TITMGKLKEVCEDAK-VIYKKSHNTMTTQSRTCSGFSQYQNKYEIIEHNSHT 269
TI +G KE+ E V++K+S M +Q C G Q +K + I HT
Sbjct: 71 TIELGLSKELREMLPIVVFKESFTVMDSQCSVCLGDYQPNDKLQQIPVCKHT 122
>At1g13160.1 68414.m01526 SDA1 family protein contains Pfam PF05285:
SDA1 domain; similar to mystery 45A
(GI:16797816){Drosophila melanogaster}
Length = 804
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +3
Query: 345 GNKRNKISDKTKSKYSIGGKDINNEEVKNDGSACGDNENKESTKSRKD 488
G+ N D + SIGG + +EEV + A D+EN+E +D
Sbjct: 568 GDDMNNTEDDSDIDTSIGGDE--DEEVNDSDEADTDSENEEIESEEED 613
>At3g61540.1 68416.m06893 peptidase family protein similar to prolyl
aminopeptidase (proline iminopeptidase) from Aeromonas
sobria SP|P46547, Propionibacterium freudenreichii
subsp. shermanii GI:2415704, Hafnia alvei GI:1754489
Length = 515
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/46 (23%), Positives = 23/46 (50%)
Frame = +3
Query: 129 GKLKEVCEDAKVIYKKSHNTMTTQSRTCSGFSQYQNKYEIIEHNSH 266
G ++ CE+ +V+ T + TCS Q+++ E+ ++ H
Sbjct: 139 GWIQRACEEFRVVLLDQRGTGLSTPLTCSSMLQFKSAKELADYLVH 184
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 27.9 bits (59), Expect = 6.8
Identities = 23/119 (19%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Frame = +3
Query: 171 KKSHNTMTTQSRTCSGFSQYQNKYEIIEHNSHTNRTET-KQGKRDFSIETEICILRRHYG 347
K+ H +T +++ E+ +++ + + E K+ +D + ++
Sbjct: 660 KEVHVGDSTNDNNMESKEDTKSEVEVKKNDGSSEKGEEGKENNKDSMEDKKLENKESQTD 719
Query: 348 NKRNK-ISDKTKSKYSIGGKDINNEEVKNDGSACGDNENKESTKSRKDVTRILLDNLKG 521
+K +K + DK + GG+ +++ V+ G ENK+ TK+ ++ R +N++G
Sbjct: 720 SKDDKSVDDKQEEAQIYGGESKDDKSVEAKGKKKESKENKK-TKTNENRVRNKEENVQG 777
Score = 27.9 bits (59), Expect = 6.8
Identities = 29/124 (23%), Positives = 57/124 (45%), Gaps = 6/124 (4%)
Frame = +3
Query: 123 TMGKLKEVCEDAKVIYKKSHNTMTTQ--SRTCSGFSQYQNKYEIIEHNSHTNRTETKQGK 296
+ K+ E ED KV K+ + + S+T +++ + + + T++G
Sbjct: 1575 SQAKIGESLEDNKVKGKEDNGDEVGKENSKTIEVKGRHEESKDGKTNENGGKEVSTEEGS 1634
Query: 297 RDFSIETEICILRRHYGNKRNKISDKTKSKYSI---GGKDINNEEVKNDGSACGDNENKE 467
+D +I + R+ G K + I + ++ ++ GG++++ EE DG E KE
Sbjct: 1635 KDSNI------VERN-GGKEDSIKEGSEDGKTVEINGGEELSTEEGSKDGKIEEGKEGKE 1687
Query: 468 -STK 476
STK
Sbjct: 1688 NSTK 1691
>At2g27150.1 68415.m03263 aldehyde oxidase 3 (AAO3) identical to
GP:3172044:gnl:PID:d1029570:AB010080
Length = 1332
Score = 27.9 bits (59), Expect = 6.8
Identities = 21/101 (20%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
Frame = +3
Query: 207 TCSGFSQYQNKYE-IIEHNSHTNRTETKQGKRDFSIETEICILRRHYGNKRNKISDKTKS 383
T +G+ + + +++ I+ ++ + K+ ++ I + I ++ S
Sbjct: 255 TGTGYYKDEERFDRYIDISNIPEMSMIKKDEKGIEIGAAVTISNAIDALEKESKSSYVFK 314
Query: 384 KYSIGGKDINNEEVKNDGSACGDNENKESTKSRKDVTRILL 506
K + + I N ++N GS G+ +S K DVT +LL
Sbjct: 315 KMATHMEKIGNRSIRNSGSIGGNLVMAQSRKFPSDVTTLLL 355
>At4g10160.1 68417.m01662 zinc finger (C3HC4-type RING finger)
family protein zinc finger protein, Arabidopsis
thaliana, gb:L76926
Length = 225
Score = 27.5 bits (58), Expect = 9.0
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = +3
Query: 117 TITMGKLKEVCEDAK-VIYKKSHNTMTTQSRTCSGFSQYQNKYEIIEHNSHTNRTE 281
T +G K++ E VIYK+S TQ C G Q + K + + HT E
Sbjct: 68 TAELGLSKDIREMLPIVIYKESFTVNDTQCSVCLGDYQAEEKLQQMPSCGHTFHME 123
>At4g05380.1 68417.m00820 AAA-type ATPase family protein contains
similarity to mitochondrial ATPase (AAA family) Bcs1p,
Saccharomyces cerevisiae, Swiss Prot:P32839
Length = 248
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/61 (24%), Positives = 29/61 (47%)
Frame = +3
Query: 399 GKDINNEEVKNDGSACGDNENKESTKSRKDVTRILLDNLKGLINCLIQNYLLENGANNQR 578
G D + D + G+N+NK+ K K LL+ + GL + ++ ++ N++
Sbjct: 95 GADTTCRKENKDETEYGENQNKKKKKDPKVTLSGLLNFVDGLWSSCVEERIIIFTTNHKE 154
Query: 579 K 581
K
Sbjct: 155 K 155
>At3g02810.1 68416.m00273 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 558
Score = 27.5 bits (58), Expect = 9.0
Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 7/111 (6%)
Frame = +3
Query: 186 TMTTQSRTCSGF-SQYQNKYEIIEHNSHTNRTETKQG------KRDFSIETEICILRRHY 344
T +S T SG S +++ E + N + + E + + D + E E +
Sbjct: 385 TEDDKSSTSSGEESSLESEKESVSKNEYKKKHEEEDSSMESDDESDSNSEHEKDQPPKPI 444
Query: 345 GNKRNKISDKTKSKYSIGGKDINNEEVKNDGSACGDNENKESTKSRKDVTR 497
K S K K +YS D+N+E + + S N EST SR D R
Sbjct: 445 DEKNQAQSLKIKYRYSWEDIDVNDERLSSKSS---QKSNDESTSSRYDSDR 492
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,322,937
Number of Sequences: 28952
Number of extensions: 221076
Number of successful extensions: 745
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1487069504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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