SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10j16
         (667 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69982-1|CAA93822.1|  143|Anopheles gambiae lectin protein.            23   6.5  
DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domai...    23   6.5  
EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       23   8.7  

>Z69982-1|CAA93822.1|  143|Anopheles gambiae lectin protein.
          Length = 143

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 591 RNYFDEKIKGKPDLYG 638
           ++YFD  I  KPD YG
Sbjct: 91  KSYFDVTITVKPDSYG 106


>DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 168

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = -1

Query: 274 CFLKYNFIRKTKSNK-F*KISLYNIGLSK 191
           CF K  F+R++K  K   K S  N+ LSK
Sbjct: 70  CFCKPGFVRESKEGKCIPKCSNENMPLSK 98


>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 471 TQPQSNHNFWTIEYY 515
           TQP+  H  WT+E+Y
Sbjct: 57  TQPRICHFSWTMEHY 71


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 649,040
Number of Sequences: 2352
Number of extensions: 12030
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -