Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10j15
(611 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56731| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 2e-11
SB_18314| Best HMM Match : NUDIX (HMM E-Value=2e-05) 66 2e-11
SB_14645| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.97
SB_16709| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_3417| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_53814| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_16078| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_58081| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_39924| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_11499| Best HMM Match : C1_1 (HMM E-Value=1.5) 27 9.1
>SB_56731| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 66.5 bits (155), Expect = 2e-11
Identities = 29/70 (41%), Positives = 41/70 (58%)
Frame = +1
Query: 310 MVKEKPNSIRIYDDEGFRRRAACICVRSDAETEVLLVTSSRRPDNWIXXXXXXXXXXXXX 489
M+K R YD++G+ +RA C+C R++ E EVLLV+SS+ PD W+
Sbjct: 83 MIKNSNKGSRTYDEDGYVKRAGCVCFRTELEKEVLLVSSSKHPDKWVVPAGGIEPGEEPK 142
Query: 490 XTAMREVLEE 519
TA+REV EE
Sbjct: 143 ETAIREVQEE 152
>SB_18314| Best HMM Match : NUDIX (HMM E-Value=2e-05)
Length = 169
Score = 66.5 bits (155), Expect = 2e-11
Identities = 29/70 (41%), Positives = 41/70 (58%)
Frame = +1
Query: 310 MVKEKPNSIRIYDDEGFRRRAACICVRSDAETEVLLVTSSRRPDNWIXXXXXXXXXXXXX 489
M+K R YD++G+ +RA C+C R++ E EVLLV+SS+ PD W+
Sbjct: 48 MIKNSNKGSRTYDEDGYVKRAGCVCFRTELEKEVLLVSSSKHPDKWVVPAGGIEPGEEPK 107
Query: 490 XTAMREVLEE 519
TA+REV EE
Sbjct: 108 ETAIREVQEE 117
>SB_14645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 30.7 bits (66), Expect = 0.97
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = -1
Query: 392 ERTQIHAARRLKPSSSYILIELGFSFTIFVCKHVNTNETNDHKINTDIN*KEKL*N 225
+RT R ++ + +++ GF + CK N +E N+ K N N ++K N
Sbjct: 53 DRTSTEPERSVRNALKAMILVYGFLQVLSHCKKQNASENNESKTNKSTNERKKCGN 108
>SB_16709| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 563
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +3
Query: 498 DAGGT*GSRSDRETRTMSWSIREPRTQTPNRGLCY 602
D G+ G+ R+ + W I +PR +T + CY
Sbjct: 40 DGFGSNGTLKRRQKKNNDWQITDPRWRTKSANKCY 74
>SB_3417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 332
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = -1
Query: 296 HVNTNETNDHKINTDIN*KEKL*NEQNFLMINKRHIRCILCRTYPFSTI-KLHNVHKKSN 120
H+ N+H + T IN + N M+ RH ++ R + + ++HN + +
Sbjct: 44 HIMVTRINNHNMVTRINNHNMVTRIHNHNMVTSRHNHIMVTRAHNHIMVTRIHNHNMVTR 103
Query: 119 YNNNKTTIR 93
+N+ R
Sbjct: 104 IHNHNMVTR 112
>SB_53814| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1301
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +1
Query: 493 TAMREVLEEAGVIGKLGRCLGVFENREHKH 582
TA+RE+ EE GVIG+ R + ENR H
Sbjct: 1196 TALRELAEEGGVIGRAERYM---ENRHILH 1222
>SB_16078| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 392
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Frame = -1
Query: 215 FLMINKRHIRC---ILCRTYPFSTIKLHNVHKKSNYNN-NKTT 99
+ +N+R+ R + CRT F +K N H + +YNN N+T+
Sbjct: 325 YAALNERYARSFTRLFCRT--FKNLKSFNAHAEPSYNNVNQTS 365
>SB_58081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 190
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +2
Query: 263 FCDRSFRSCLRVCKQKW*RRSLIR*GYMTTRVLGDG 370
FC C CK KW + +R Y TT+ + G
Sbjct: 40 FCPHKLSECCSSCKSKW--TANLRYQYRTTQTISSG 73
>SB_39924| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 261
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -3
Query: 471 LYSPARHNPVVGPSRRRHQ 415
LY+PA NP+ P RRHQ
Sbjct: 103 LYAPAIKNPIALPFMRRHQ 121
>SB_11499| Best HMM Match : C1_1 (HMM E-Value=1.5)
Length = 572
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -3
Query: 471 LYSPARHNPVVGPSRRRHQ 415
LY+PA NP+ P RRHQ
Sbjct: 171 LYAPAIKNPIALPFMRRHQ 189
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,390,397
Number of Sequences: 59808
Number of extensions: 325637
Number of successful extensions: 850
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1499981500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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