Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10j15
(611 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g73540.1 68414.m08512 MutT/nudix family protein low similarit... 44 8e-05
At1g18300.1 68414.m02286 MutT/nudix family protein similar to SP... 39 0.002
At1g12880.1 68414.m01496 MutT/nudix family protein similar to di... 29 3.2
At1g14860.1 68414.m01777 MutT/nudix family protein low similarit... 28 4.2
At5g11240.1 68418.m01313 transducin family protein / WD-40 repea... 28 5.6
At5g36200.1 68418.m04364 F-box family protein contains Pfam PF00... 27 9.8
At5g01280.1 68418.m00037 expressed protein 27 9.8
At2g01670.1 68415.m00094 MutT/nudix family protein similar to SP... 27 9.8
>At1g73540.1 68414.m08512 MutT/nudix family protein low similarity
to SP|Q09790 Diadenosine 5',5'''-P1,P6-hexaphosphate
hydrolase (EC 3.6.1.-) (Ap6A hydrolase)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00293: NUDIX domain
Length = 198
Score = 44.0 bits (99), Expect = 8e-05
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = +1
Query: 310 MVKEKPNSIRIYDDEGFRRRAACICVR----SDAETEVLLVTSSRRPDNWIXXXXXXXXX 477
+V ++ Y+ G+R+ C+ R E EVLL+++ ++ +
Sbjct: 44 LVSRTGRDLQRYNTAGYRQVVGCVPYRYKKHGGGEIEVLLISAQKKGKGMLLPKGGWEID 103
Query: 478 XXXXXTAMREVLEEAGVIGKLGRCLGVFENREHKH 582
A+RE +EEAGV G+L LG ++ + +H
Sbjct: 104 ESIEEAALRETIEEAGVTGQLEESLGKWQYKSKRH 138
>At1g18300.1 68414.m02286 MutT/nudix family protein similar to
SP|Q09790 Diadenosine 5',5'''-P1,P6-hexaphosphate
hydrolase (EC 3.6.1.-) (Ap6A hydrolase)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00293: NUDIX domain
Length = 207
Score = 39.1 bits (87), Expect = 0.002
Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Frame = +1
Query: 310 MVKEKPNSIRIYDDEGFRRRAACICVR------SDAETEVL--LVTSSRRPDNWIXXXXX 465
+V ++ YD G+R+ C+ R + ET+V+ L+ S+++ +
Sbjct: 43 LVSRTGRDLQRYDHAGYRQVVGCVPYRYKKQEVNGVETQVIQVLLVSAQKGKGMLFPKGG 102
Query: 466 XXXXXXXXXTAMREVLEEAGVIGKLGRCLGVFENREHKH 582
A+RE +EEAGV G+L LG ++ + +H
Sbjct: 103 WETDESMEEAALRETIEEAGVTGELEEKLGKWQYKSKRH 141
>At1g12880.1 68414.m01496 MutT/nudix family protein similar to
diphosphoinositol polyphosphate phosphohydrolase [Homo
sapiens] GI:3978224; contains Pfam profile PF00293:
NUDIX domain
Length = 203
Score = 28.7 bits (61), Expect = 3.2
Identities = 23/63 (36%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +1
Query: 406 EVLLVTSSRRPDNWIXXXXXXXXXXXXXXTAMREVLEEAGVIGKLGRC-LGVFENREHKH 582
EVL+V+S R D + A RE +EEAGV G L LGV+E R
Sbjct: 49 EVLMVSSPNRHD-LVFPKGGWEDDETVLEAASREAIEEAGVKGILRELPLGVWEFRSKSS 107
Query: 583 RTE 591
E
Sbjct: 108 TVE 110
>At1g14860.1 68414.m01777 MutT/nudix family protein low similarity
to SP|Q09790 Diadenosine 5',5'''-P1,P6-hexaphosphate
hydrolase (EC 3.6.1.-) (Ap6A hydrolase)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00293: NUDIX domain
Length = 176
Score = 28.3 bits (60), Expect = 4.2
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +1
Query: 496 AMREVLEEAGVIGKLGRCLGVFE 564
A RE LEEAGV+G + R LG ++
Sbjct: 72 ASRESLEEAGVVGNVERQLGKWD 94
>At5g11240.1 68418.m01313 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to uncharacterized protein KIAA0007 (GI:1663708)
{Homo sapiens} 1.2e-11
Length = 615
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = -1
Query: 449 IQLSGRLEDVTSRTSVSASERTQIHA 372
+QLSGRL+ VT++ + +A +TQI A
Sbjct: 546 LQLSGRLQLVTAQINKAAGSQTQITA 571
>At5g36200.1 68418.m04364 F-box family protein contains Pfam
PF00646: F-box domain; contains TIGRFAM TIGR01640: F-box
protein interaction domain; similar to unknown protein
(pir||T00841)
Length = 471
Score = 27.1 bits (57), Expect = 9.8
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = -1
Query: 302 CKHVNTNETNDHKINTDIN*KEKL*NEQNFLMINKRHIRCILCRTYPFSTIKLHNVHKKS 123
CK+ NT +NDH + K E L++ + L ++ LH +HK++
Sbjct: 30 CKNWNTL-SNDHSFTRKLFGKTITTKENECLVVMMMDSKVYLM------SVNLHRIHKEN 82
Query: 122 NYNNNKTTI 96
+ NN K++I
Sbjct: 83 DDNNIKSSI 91
>At5g01280.1 68418.m00037 expressed protein
Length = 460
Score = 27.1 bits (57), Expect = 9.8
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -1
Query: 572 SRFSNTPRHRPSFPITPASSSTSR 501
+R S TP RPS P + A+S+T+R
Sbjct: 101 TRKSKTPAKRPSTPTSRATSTTTR 124
>At2g01670.1 68415.m00094 MutT/nudix family protein similar to
SP|Q09790 Diadenosine 5',5'''-P1,P6-hexaphosphate
hydrolase (EC 3.6.1.-) (Ap6A hydrolase)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00293: NUDIX domain
Length = 182
Score = 27.1 bits (57), Expect = 9.8
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +1
Query: 400 ETEVLLVTSSRRPDNWIXXXXXXXXXXXXXXTAMREVLEEAGVIGKLGRCLGVFE 564
E EVL++ SS++ + A RE LEEAGV+G + LG ++
Sbjct: 46 EVEVLVI-SSQKGHALMFPKGGWELDESVEEAASRECLEEAGVLGNVEHQLGKWD 99
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,882,987
Number of Sequences: 28952
Number of extensions: 215824
Number of successful extensions: 487
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 487
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1226538000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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