Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10j09
         (710 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    28   0.065
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.26 

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 28.3 bits (60), Expect = 0.065
 Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
 Frame = +3

Query: 12  HTWCNSI-DLS*LFYVFVQFIFNSNFTIVRKTMLMVIQKILLYSC*LRVI*FVYSVMALS 188
           HT  N I D+  L+Y+ +Q     N+ +  K     +QK L      R +  +Y ++   
Sbjct: 158 HTESNIINDMCSLYYI-LQITLIVNYALALKNRFKELQKYLKIETSCRYVGTLYRILTTM 216

Query: 189 KKQLEKLSGFTISLL 233
            + +  + G+T+ L+
Sbjct: 217 MEMVNDIFGWTLILI 231



 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 21  CNSIDLS*LFYVFVQFIFNSNFTI 92
           C +  LS L+     + FN+NFTI
Sbjct: 235 CITSSLSSLYTCIAGYEFNANFTI 258


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -3

Query: 510 IILILFFFYSTFILFSKRVHQI*VTVEYIYAY 415
           I+L +++FY  FILF+  VH + +   Y + Y
Sbjct: 234 ILLCIYYFYYAFILFT--VHLLLLVCIYYFYY 263



 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/16 (43%), Positives = 13/16 (81%)
 Frame = -3

Query: 510 IILILFFFYSTFILFS 463
           I+L +++FY  FI+F+
Sbjct: 109 ILLCVYYFYYAFIIFT 124



 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 531 HLISKPTIILILFFFYSTFILFS 463
           HL+  P I    ++FYS FI+F+
Sbjct: 205 HLLFLPCI----YYFYSAFIIFT 223



 Score = 21.8 bits (44), Expect = 5.7
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -3

Query: 507 ILILFFFYSTFILFS 463
           +L +++FY  FI+F+
Sbjct: 143 LLCIYYFYCAFIIFT 157


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,724
Number of Sequences: 336
Number of extensions: 3989
Number of successful extensions: 8
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)