Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10j09
         (710 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0728 - 5356400-5356676,5356888-5357090,5357181-5357474,535...    28   6.4  

>06_01_0728 -
           5356400-5356676,5356888-5357090,5357181-5357474,
           5357940-5358063,5358157-5359496
          Length = 745

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 35/140 (25%), Positives = 59/140 (42%)
 Frame = +3

Query: 165 VYSVMALSKKQLEKLSGFTISLLSFGMTTLIGMVFLTDWKPVVTYIPYYNTKFEEVKKKE 344
           V  VM L K   EK+S +T+     G+   IG   L+     +    + +    E K KE
Sbjct: 370 VIDVMKLRKMSQEKVSAWTMK----GLMAAIGSSRLSTISNTIE--SFDDVDGMEQKDKE 423

Query: 345 C*IVFWAGRLAALSYFLRRACTLYRHIYTLLLLKFGARVWRIK*MLNKRRIELK*WLVSR 524
                W  + AA + F   A   Y+HI  + LL+F  +   +  +L +     +   + +
Sbjct: 424 INNE-WEAKAAASAIFKNVARPGYKHIEEVDLLRFFNKE-EVDLVLQRFEGAFETRKIKK 481

Query: 525 SGVSGFVIKCQPGRSQPAHA 584
           S +  +V+K    R   AH+
Sbjct: 482 SALKNWVVKAYLDRKSLAHS 501


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,918,888
Number of Sequences: 37544
Number of extensions: 370677
Number of successful extensions: 842
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 842
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)