Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10j08
         (671 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0324 - 2357432-2357724,2358042-2358105,2358321-2358404,235...    32   0.36 
07_01_0125 - 944207-945778                                             29   2.6  
06_01_0026 + 265755-265968,267319-267468,267694-267738,267786-26...    28   5.9  
01_06_0959 - 33362810-33363125,33363309-33363475,33363583-333644...    28   5.9  
11_06_0023 - 19325966-19326046,19326132-19326248,19326635-193267...    28   7.8  
05_01_0515 + 4343067-4344206,4344293-4344478,4344884-4345018,434...    28   7.8  
04_01_0223 + 2813129-2814014,2815928-2816309,2816358-2816459,281...    28   7.8  

>06_01_0324 -
           2357432-2357724,2358042-2358105,2358321-2358404,
           2358638-2358715,2359298-2359360,2359459-2359561,
           2359675-2359800,2360212-2360258,2361284-2361388,
           2361483-2361605,2361759-2361854,2362052-2362141,
           2362759-2362815,2362899-2363028,2363613-2363708,
           2363815-2363875,2364391-2364490
          Length = 571

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
 Frame = +3

Query: 528 SIHSREWISTAVVTYIADYIARNFHSLPTS---ITNKDWHIVPILNPDGY 668
           ++H  E +   V+  +A+++  N+   P +   + N   HI+P +NPDG+
Sbjct: 182 NVHGDEPVGREVLIKLANWLCDNYLKDPLATLIVKNMHLHILPTMNPDGF 231


>07_01_0125 - 944207-945778
          Length = 523

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 21/93 (22%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
 Frame = +3

Query: 282 VIPRGLKQIVPTNKPKKRKVKLMNWKKYHRLNVIYAFIDELERDYPAICTVSV-IGQSVE 458
           +I    ++I      +  ++K ++ + Y     + AF     +DYP + +VS+ +     
Sbjct: 311 IITSRSEKIAKLGTTQPLRLKFLSREAYWYFFKVLAFGSSDPKDYPEVASVSMAMFNGYF 370

Query: 459 GRDIKMLKISNS-DARNSAIWLDASIHSREWIS 554
            R++    I    D  N A ++ ASI++ +W+S
Sbjct: 371 DREMYNTFIGPFIDLNNMATFIQASIYNGDWLS 403


>06_01_0026 +
           265755-265968,267319-267468,267694-267738,267786-268460,
           268779-268843,268854-269073,269163-269438,269547-269663,
           269776-269853,269930-270184,270235-270323,270403-270816
          Length = 865

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -1

Query: 266 FLSELSLSTVFSPYSGIGFQIYIVFGNT 183
           F+S+ SL+ + SP  G GF I+ +FG T
Sbjct: 389 FISKTSLTCLLSP--GCGFNIFRIFGRT 414


>01_06_0959 -
           33362810-33363125,33363309-33363475,33363583-33364410,
           33364483-33364719,33365455-33365871,33365951-33366412,
           33367197-33367382
          Length = 870

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 17/61 (27%), Positives = 28/61 (45%)
 Frame = +3

Query: 450 SVEGRDIKMLKISNSDARNSAIWLDASIHSREWISTAVVTYIADYIARNFHSLPTSITNK 629
           SV G  + +  +S    RN    L  ++H     +T V + I+  IA  FH+   ++ N 
Sbjct: 511 SVTGPPVTLSVVSR--IRNGGNLLKGAVHGAAAFATGVSSPISGAIASTFHNCKGAVKNS 568

Query: 630 D 632
           D
Sbjct: 569 D 569


>11_06_0023 -
           19325966-19326046,19326132-19326248,19326635-19326703,
           19326922-19327119,19327388-19327591,19327688-19327828,
           19328416-19328625,19329330-19329944
          Length = 544

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = -2

Query: 217 LDSKSTSCSEIPLVFRKTFDNFVALVVEIVFIVEDVSRLCIRSSFFDSTLD 65
           +D    S  E+P   R+ F+N    + +++F+  D +     + FFDSTL+
Sbjct: 354 IDEIQNSMPELPEAKRRRFENMGLSMQDVLFLANDDN----VARFFDSTLE 400


>05_01_0515 +
           4343067-4344206,4344293-4344478,4344884-4345018,
           4346652-4346753,4346973-4347068,4347146-4347238,
           4347351-4347470,4347580-4347612,4347699-4347749,
           4347874-4347952,4348398-4348456
          Length = 697

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +3

Query: 285 IPRGLKQIVPTNKPKKRKVKLMNWKKYH 368
           + +G +Q  P  K K+ +V+ + W+ YH
Sbjct: 470 VEKGKEQEKPVEKGKEEEVEFLEWEHYH 497


>04_01_0223 +
           2813129-2814014,2815928-2816309,2816358-2816459,
           2816727-2817249
          Length = 630

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +3

Query: 330 KRKVKLMNWKKYHRLNVIYAFID 398
           K  V+L+ W+K H + ++Y F+D
Sbjct: 415 KNLVELVGWEKAHTIFLVYEFVD 437


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,341,789
Number of Sequences: 37544
Number of extensions: 286465
Number of successful extensions: 737
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 737
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1703141568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)