Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10j08
(671 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28263| Best HMM Match : Peptidase_M14 (HMM E-Value=0) 58 6e-09
SB_26695| Best HMM Match : Peptidase_M14 (HMM E-Value=0) 56 3e-08
SB_9115| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_24088| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_15763| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 7e-06
SB_1170| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 7e-06
SB_23383| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_34368| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05
SB_27587| Best HMM Match : Peptidase_M14 (HMM E-Value=0) 43 3e-04
SB_37943| Best HMM Match : Peptidase_M14 (HMM E-Value=0) 42 6e-04
SB_37941| Best HMM Match : Peptidase_M14 (HMM E-Value=0) 35 0.052
SB_49771| Best HMM Match : Peptidase_M14 (HMM E-Value=1.1e-34) 33 0.16
SB_11736| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_22509| Best HMM Match : ANF_receptor (HMM E-Value=0) 31 0.64
SB_31747| Best HMM Match : Myotub-related (HMM E-Value=0) 30 1.5
SB_49100| Best HMM Match : Peptidase_M14 (HMM E-Value=0) 29 3.4
SB_46192| Best HMM Match : ubiquitin (HMM E-Value=0.12) 28 6.0
SB_4062| Best HMM Match : MCPVI (HMM E-Value=7.5) 28 6.0
SB_55350| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_26457| Best HMM Match : Band_41 (HMM E-Value=0.0026) 28 7.9
SB_4617| Best HMM Match : Extensin_2 (HMM E-Value=0.38) 28 7.9
>SB_28263| Best HMM Match : Peptidase_M14 (HMM E-Value=0)
Length = 1258
Score = 58.0 bits (134), Expect = 6e-09
Identities = 34/124 (27%), Positives = 63/124 (50%), Gaps = 7/124 (5%)
Frame = +3
Query: 321 KPKKRKVKLMNWKKYHRLNVIYAFIDELERDYPAICTVSVIGQSVEGRDIKMLKISNSDA 500
+ K K L + K+H + +F+ EL +P I + IG+SVEGRD+ ++ +S++
Sbjct: 619 RTKSSKRTLSDEFKHHNYDETLSFLKELHGQFPNITRLYSIGKSVEGRDLWVIALSSTPN 678
Query: 501 RNS----AIWLDASIHSREWISTAVVTYIADYIARNF---HSLPTSITNKDWHIVPILNP 659
++ A++H E + V+ A Y+ N+ + ++ H++P +NP
Sbjct: 679 KHEPGKPEFKYIANMHGNEVVGKEVLLTFAKYLCDNYKKDDEVTKALDTTRVHLLPSMNP 738
Query: 660 DGYE 671
DGYE
Sbjct: 739 DGYE 742
>SB_26695| Best HMM Match : Peptidase_M14 (HMM E-Value=0)
Length = 441
Score = 55.6 bits (128), Expect = 3e-08
Identities = 27/110 (24%), Positives = 57/110 (51%), Gaps = 7/110 (6%)
Frame = +3
Query: 363 YHRLNVIYAFIDELERDYPAICTVSVIGQSVEGRDIKMLKISNSDARNS----AIWLDAS 530
+H + +++ ++YP I + +G++VE RD+ +L+IS+ ++ +
Sbjct: 33 HHNYEAMKGLLEKFNKEYPDITRLYSVGKTVENRDLLVLEISDKPGKHEKGEPEFKYIGN 92
Query: 531 IHSREWISTAVVTYIADYIARNFH---SLPTSITNKDWHIVPILNPDGYE 671
+H E +S ++ + Y+ +N+ L + + HI+P +NPDGYE
Sbjct: 93 MHGNEVVSREILLQLIGYLLKNYQENSELKKLVDSTRIHIMPSMNPDGYE 142
>SB_9115| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 50.0 bits (114), Expect = 2e-06
Identities = 26/103 (25%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Frame = +3
Query: 384 YAFIDELERDYPAICTVSVIGQSVEGRDIKMLKISNSDARN----SAIWLDASIHSREWI 551
+A ID L +P I V IG+S +G+ +++++I+ + ++ A++H E +
Sbjct: 8 HAIIDSLAEKFPNITRVYTIGRSYQGKSLRVIEITKNPGKHIPGKPEFKYIANMHGNEVV 67
Query: 552 STAVVTYIADYIARNFHSLPTSITNKDW---HIVPILNPDGYE 671
++ +A+++ + +P D H++P +NPDGYE
Sbjct: 68 GRELLLLLAEHLCEAYGKMPGITQLLDTTRIHLLPSMNPDGYE 110
>SB_24088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Frame = +3
Query: 483 ISNSDARNSAIW-LDASIHSREWISTAVVTYIADYIARNF--HSLPTSITNK-DWHIVPI 650
I ARN ++ ++ IH+REW+S A YIA + + + TS+ +K D+ I+P+
Sbjct: 1 IKGKRARNKPVFFMNCGIHAREWVSPATCMYIAKQLLSRYGKDANVTSVLDKMDFVIMPV 60
Query: 651 LNPDGY 668
LNPDGY
Sbjct: 61 LNPDGY 66
>SB_15763| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 48.0 bits (109), Expect = 7e-06
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Frame = +3
Query: 429 TVSVIGQSVEGRDIKMLKISNSDARNSAIW-LDASIHSREWISTAVVTYIADYIARNFHS 605
T++ +G + EGR ++I ++ ++ IH+REWI+ A YI + S
Sbjct: 111 TMNTVGSTYEGRQQYYMEIKGRSLPEKPVFFMNCGIHAREWITPATCMYIITQFITKYRS 170
Query: 606 --LPTSITNK-DWHIVPILNPDGY 668
T + +K D+ I+P+LN DGY
Sbjct: 171 DKSVTEVLDKMDFIIMPVLNADGY 194
>SB_1170| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 561
Score = 48.0 bits (109), Expect = 7e-06
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 7/111 (6%)
Frame = +3
Query: 360 KYHRLNVIYAFIDELERDYPAICTVSVIGQSVEGRDIKMLKISNSDARNSA----IWLDA 527
++H + F+ YP I + IG SV+ R + ++IS++ ++ A
Sbjct: 62 QHHNYEKLTWFLKYFSLKYPDITRLYSIGYSVQNRKLWAMEISDNPGQHEPGEPEFKYIA 121
Query: 528 SIHSREWISTAVVTYIADYIARNFHS---LPTSITNKDWHIVPILNPDGYE 671
+IH E + ++ + Y+ N+ S + T + HI+P +NPDGYE
Sbjct: 122 NIHGNEVVGRELLLQLIRYLCENYESHEKVRTLVDTTRIHILPSINPDGYE 172
>SB_23383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 905
Score = 45.6 bits (103), Expect = 4e-05
Identities = 25/110 (22%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Frame = +3
Query: 360 KYHRLNVIYAFIDELERDYPAICTVSVIGQSVEGRDIKMLKISNSDARNS----AIWLDA 527
K+H + +F+ ++ YP I + G SV+GR++ +++IS++ +
Sbjct: 497 KHHTHKEMTSFLKKVHELYPHITRLYSAGYSVKGRELWVMEISDNPGTHEPGEPEFKYVG 556
Query: 528 SIHSREWISTAVVTYIADYIARNFHSLPTSITNKDW---HIVPILNPDGY 668
++H E + ++ + + N+H + + D+ HI+P +NPDG+
Sbjct: 557 NMHGNEVVGREMLLLLIQVLCENYHRISSITALVDYTRIHIMPSMNPDGH 606
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/112 (22%), Positives = 52/112 (46%), Gaps = 9/112 (8%)
Frame = +3
Query: 363 YHRLNVIYAFIDELERDYPAICTVSVIGQSVEGRDIKMLKISNS----DARNSAIWLDAS 530
YH + + ++ + Y I + +G+SV R + L+I++ + +
Sbjct: 40 YHNYDELTRLLESYSKRYKKIARLHSVGKSVLNRHLWALQITDHPDIIEPGEPMFKYVGN 99
Query: 531 IHSREWISTAVVTYIADYIARNF----HSLPTSITNK-DWHIVPILNPDGYE 671
+H E + ++ Y+ Y+ N+ H T + N + +I+P +NPDG+E
Sbjct: 100 MHGNEAVGRQILIYLVQYLLENYGKTGHERITKLVNSTNIYIMPSMNPDGFE 151
>SB_34368| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 542
Score = 44.4 bits (100), Expect = 8e-05
Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
Frame = +3
Query: 531 IHSREWISTAVVTYIADYIARNF--HSLPTSITNK-DWHIVPILNPDGYE 671
IH+REWIS A Y D + + S TS+ +K D+ I+P++NPDGYE
Sbjct: 487 IHAREWISPATCMYAIDQMVTKYGKDSGITSMLDKMDFVILPVVNPDGYE 536
>SB_27587| Best HMM Match : Peptidase_M14 (HMM E-Value=0)
Length = 879
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/112 (22%), Positives = 52/112 (46%), Gaps = 9/112 (8%)
Frame = +3
Query: 363 YHRLNVIYAFIDELERDYPAICTVSVIGQSVEGRDIKMLKISNS----DARNSAIWLDAS 530
YH + + ++ + Y I + +G+SV R + L+I++ + +
Sbjct: 40 YHNYDELTRLLESYSKRYKKIARLHSVGKSVLNRHLWALQITDHPDIIEPGEPMFKYVGN 99
Query: 531 IHSREWISTAVVTYIADYIARNF----HSLPTSITNK-DWHIVPILNPDGYE 671
+H E + ++ Y+ Y+ N+ H T + N + +I+P +NPDG+E
Sbjct: 100 MHGNEAVGRQILIYLVQYLLENYGKTGHERITKLVNSTNIYIMPSMNPDGFE 151
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/50 (24%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +3
Query: 528 SIHSREWISTAVVTYIADYIARNFHSLPTSITNKDW---HIVPILNPDGY 668
++H E + ++ + + N+H + + D+ HI+P +NPDG+
Sbjct: 531 NMHGNEVVGREMLLLLIQVLCENYHRISSITALVDYTRIHIMPSMNPDGH 580
>SB_37943| Best HMM Match : Peptidase_M14 (HMM E-Value=0)
Length = 249
Score = 41.5 bits (93), Expect = 6e-04
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Frame = +3
Query: 498 ARNSAIWLDASIHSREWISTAVVTYIADYIARNFH--SLPTSITNK-DWHIVPILNPDGY 668
A +++ IH+REW+S A YI + + + TS+ +K D+ I P++NPDGY
Sbjct: 67 ADKPVFFVNCGIHAREWVSPATCMYIIHELVSKYEKDAKVTSVLDKMDFIIHPMVNPDGY 126
>SB_37941| Best HMM Match : Peptidase_M14 (HMM E-Value=0)
Length = 1328
Score = 35.1 bits (77), Expect = 0.052
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +3
Query: 525 ASIHSREWISTAVVTYIADYIARNF---HSLPTSITNKDWHIVPILNPDGYE 671
A+IH E + ++ ++ Y+ N+ + + + HI+P LNPDGYE
Sbjct: 125 ANIHGNEVVGKEMLLHLIRYLCHNYGVNKRITDLVDSTRIHILPSLNPDGYE 176
>SB_49771| Best HMM Match : Peptidase_M14 (HMM E-Value=1.1e-34)
Length = 635
Score = 33.5 bits (73), Expect = 0.16
Identities = 25/112 (22%), Positives = 46/112 (41%), Gaps = 8/112 (7%)
Frame = +3
Query: 360 KYHRLNVIYAFIDELERDYPAICTVSVIGQSVEGRDIKMLKISNSDARNSA----IWLDA 527
KYH + + P I + IG+S EGR I L+IS + + + + +
Sbjct: 10 KYHDYKTMTQMLQSYYLKCPGIIRLQSIGKSQEGRKIWSLEISVNPGQENPYKPNVGMVG 69
Query: 528 SIHSREWISTAVVTYIADYIARNFHSLPTSIT----NKDWHIVPILNPDGYE 671
S+ + I ++ + Y+ + S + H+VP ++ DG E
Sbjct: 70 SLQGSDVIGREMLLALVGYLCEGYKSKEARVVKLLQTTRLHVVPAVDVDGNE 121
>SB_11736| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 503
Score = 33.1 bits (72), Expect = 0.21
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Frame = +3
Query: 423 ICTVSVIGQSVEGRDIKMLKISNSDARNS------AIWLDASIHSREWISTAVVTYIADY 584
IC V+ +++ G + +L ++N R S A+ + A +H E S+ ++ + D+
Sbjct: 213 ICKQRVLCRTLAGNFVYILTVTNPSRRPSDAEAKRAVVVTARVHPGETNSSWMMKGLLDF 272
Query: 585 IARNFHSLPTSITNKDWHIVPILNPDG 665
+ N + IVP++NPDG
Sbjct: 273 LTSNSADAKLLRDTFIFKIVPMINPDG 299
>SB_22509| Best HMM Match : ANF_receptor (HMM E-Value=0)
Length = 752
Score = 31.5 bits (68), Expect = 0.64
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -2
Query: 214 DSKSTSCSEIPLVFRKTFD-NFVALVVEIVFIVEDVSRLCIRSSFFDSTLD*NVVK 50
D+ TSC ++P+V+ F+ N +V +V ++ +S +C FF D V+K
Sbjct: 557 DANLTSCYKLPVVYATPFNGNTAQIVTFVVVLLGSISTIC-TGVFFLKNKDNRVIK 611
>SB_31747| Best HMM Match : Myotub-related (HMM E-Value=0)
Length = 550
Score = 30.3 bits (65), Expect = 1.5
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 9/76 (11%)
Frame = +3
Query: 447 QSVEGRDIKMLKISNSDARNSAIWLDASIHSREW---ISTAVVTY--IADYIARNFH--- 602
+SVE RD+ +L+++ DAR+ I D++ S +W +S ++ Y I D A +
Sbjct: 141 ESVELRDLFILQVNCKDARSFRIVFDSNDQSVDWLHKVSAKILPYSRIEDLFAFAHYAWS 200
Query: 603 -SLPTSITNKDWHIVP 647
+ P S T++D P
Sbjct: 201 MASPNSFTSQDASATP 216
>SB_49100| Best HMM Match : Peptidase_M14 (HMM E-Value=0)
Length = 313
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +3
Query: 618 ITNKDWHIVPILNPDGYE 671
+ N +W I+P+LN DGYE
Sbjct: 108 LDNYEWVILPVLNVDGYE 125
>SB_46192| Best HMM Match : ubiquitin (HMM E-Value=0.12)
Length = 533
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/66 (25%), Positives = 29/66 (43%)
Frame = +3
Query: 429 TVSVIGQSVEGRDIKMLKISNSDARNSAIWLDASIHSREWISTAVVTYIADYIARNFHSL 608
T I SV + + K+ + R L HS++ +S V+T D I ++ S+
Sbjct: 319 TACNINTSVSSNERGVTKVKQNGPRKENDSLGDKDHSKDLLSNGVLTLGRDDIGKSVESI 378
Query: 609 PTSITN 626
P T+
Sbjct: 379 PAENTS 384
>SB_4062| Best HMM Match : MCPVI (HMM E-Value=7.5)
Length = 290
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = -3
Query: 501 GRRCLISLAS*YRVPRPIAQ*QRQCK 424
G RCL+SL Y+V RPI+ Q++ K
Sbjct: 47 GERCLVSLFQKYKVHRPISIEQKKKK 72
>SB_55350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 27.9 bits (59), Expect = 7.9
Identities = 9/44 (20%), Positives = 23/44 (52%)
Frame = +3
Query: 486 SNSDARNSAIWLDASIHSREWISTAVVTYIADYIARNFHSLPTS 617
+ D+ IWL EW+++++ T + D +++ + + +S
Sbjct: 11 ATGDSHLDEIWLKFEAKLNEWVTSSLTTVVRDLVSKEINMVISS 54
>SB_26457| Best HMM Match : Band_41 (HMM E-Value=0.0026)
Length = 453
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 528 SIHSREWISTAVVTYIADYIARNFHSLPTS 617
SI R+ ST+ +T++ D+ R FHS P+S
Sbjct: 355 SITLRKPSSTSDITHLGDFHERGFHSGPSS 384
>SB_4617| Best HMM Match : Extensin_2 (HMM E-Value=0.38)
Length = 450
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/70 (22%), Positives = 34/70 (48%)
Frame = +3
Query: 273 PGTVIPRGLKQIVPTNKPKKRKVKLMNWKKYHRLNVIYAFIDELERDYPAICTVSVIGQS 452
PG+V P + ++ ++ +N+K ++V + F+DE+ + + ++ Q
Sbjct: 251 PGSVGPSVTSPAPLSAAEEQAYLEKLNFKS-EAVDVTHRFLDEISPFFDRLVVDELVKQE 309
Query: 453 VEGRDIKMLK 482
G D+K LK
Sbjct: 310 HSGNDLKKLK 319
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,549,226
Number of Sequences: 59808
Number of extensions: 352845
Number of successful extensions: 900
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 893
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1721264831
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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