Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10j08
(671 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024751-13|AAK21512.2| 488|Caenorhabditis elegans Hypothetical... 84 8e-17
AF098994-5|AAC67473.3| 579|Caenorhabditis elegans Hypothetical ... 79 4e-15
AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical ... 79 4e-15
Z75714-6|CAE54930.1| 532|Caenorhabditis elegans Hypothetical pr... 70 2e-12
Z75714-5|CAB00065.2| 581|Caenorhabditis elegans Hypothetical pr... 70 2e-12
Z83122-4|CAB05602.2| 664|Caenorhabditis elegans Hypothetical pr... 69 4e-12
AC024791-18|AAT81180.1| 438|Caenorhabditis elegans Hypothetical... 67 9e-12
AC024791-16|AAF60674.3| 468|Caenorhabditis elegans Hypothetical... 67 9e-12
AC024791-15|ABQ13056.1| 464|Caenorhabditis elegans Hypothetical... 67 9e-12
Z78413-12|CAB01666.3| 448|Caenorhabditis elegans Hypothetical p... 66 2e-11
Z78411-5|CAB01647.3| 448|Caenorhabditis elegans Hypothetical pr... 66 2e-11
AF099003-2|AAC68743.2| 454|Caenorhabditis elegans Hypothetical ... 64 1e-10
U80448-8|AAB37821.3| 1014|Caenorhabditis elegans Hypothetical pr... 55 4e-08
AF098994-3|AAT81188.1| 455|Caenorhabditis elegans Hypothetical ... 55 4e-08
AF098994-2|AAT81187.1| 505|Caenorhabditis elegans Hypothetical ... 55 4e-08
Z71267-9|CAA95852.2| 380|Caenorhabditis elegans Hypothetical pr... 54 7e-08
Z71262-14|CAN99672.1| 380|Caenorhabditis elegans Hypothetical p... 54 7e-08
Z81054-7|CAB02881.1| 472|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z68134-1|CAA92226.2| 492|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AF067618-6|AAC19197.2| 1015|Caenorhabditis elegans Hypothetical ... 36 0.026
U23484-1|AAC46766.2| 459|Caenorhabditis elegans Hypothetical pr... 29 3.0
AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical ... 29 4.0
Z70271-2|CAA94236.2| 1256|Caenorhabditis elegans Hypothetical pr... 28 5.3
L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family... 28 6.9
>AC024751-13|AAK21512.2| 488|Caenorhabditis elegans Hypothetical
protein Y18H1A.9 protein.
Length = 488
Score = 84.2 bits (199), Expect = 8e-17
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 5/130 (3%)
Frame = +3
Query: 297 LKQIVPTNKPKKRKVKLMNWKKYHRLNVIYAFIDELERDYPAICTVSVIGQSVEGRDIKM 476
L++ V + +++KV+ N +YH + +++ L YP + +V IG + EGR I +
Sbjct: 104 LRKQVRLHDWREQKVQF-NLAQYHSFADVINYLNSLAITYPELVSVQPIGTTHEGRQIPL 162
Query: 477 LKISN--SDARNSAIWLDASIHSREWISTAVVTYIADYIARNFH---SLPTSITNKDWHI 641
+KI+N + IW+D IH+REW+S + V Y + + + + +W+I
Sbjct: 163 IKITNKRNGGTKRGIWVDGGIHAREWVSPSTVLYFIHQLVTQYDKDVQIKQFVDQLEWYI 222
Query: 642 VPILNPDGYE 671
VP+LNPDGYE
Sbjct: 223 VPLLNPDGYE 232
>AF098994-5|AAC67473.3| 579|Caenorhabditis elegans Hypothetical
protein T06A4.1a protein.
Length = 579
Score = 78.6 bits (185), Expect = 4e-15
Identities = 40/112 (35%), Positives = 67/112 (59%), Gaps = 6/112 (5%)
Frame = +3
Query: 354 WKKYHRLNVIYAFIDELERDYPAICTVSVIGQSVEGRDIKMLKIS---NSDARNSAIWLD 524
+ KY+ L I + L+++YP + T+ IGQS E R + ++KI+ N ++W+D
Sbjct: 125 YDKYNSLEEIQTEMKRLKKEYPTMITLIDIGQSHENRTLLVMKITGKRNPLGSKISMWID 184
Query: 525 ASIHSREWISTAVVTYIADYIARNFHSLPT---SITNKDWHIVPILNPDGYE 671
A IH+REWI+ A YIA + + + T + + D++I+P++NPDGYE
Sbjct: 185 AGIHAREWIAPATAMYIAHELLLGYENDATVAKLMDHIDFYILPVMNPDGYE 236
>AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical
protein T06A4.1b protein.
Length = 606
Score = 78.6 bits (185), Expect = 4e-15
Identities = 40/112 (35%), Positives = 67/112 (59%), Gaps = 6/112 (5%)
Frame = +3
Query: 354 WKKYHRLNVIYAFIDELERDYPAICTVSVIGQSVEGRDIKMLKIS---NSDARNSAIWLD 524
+ KY+ L I + L+++YP + T+ IGQS E R + ++KI+ N ++W+D
Sbjct: 125 YDKYNSLEEIQTEMKRLKKEYPTMITLIDIGQSHENRTLLVMKITGKRNPLGSKISMWID 184
Query: 525 ASIHSREWISTAVVTYIADYIARNFHSLPT---SITNKDWHIVPILNPDGYE 671
A IH+REWI+ A YIA + + + T + + D++I+P++NPDGYE
Sbjct: 185 AGIHAREWIAPATAMYIAHELLLGYENDATVAKLMDHIDFYILPVMNPDGYE 236
>Z75714-6|CAE54930.1| 532|Caenorhabditis elegans Hypothetical
protein ZC434.9b protein.
Length = 532
Score = 69.7 bits (163), Expect = 2e-12
Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 5/109 (4%)
Frame = +3
Query: 360 KYHRLNVIYAFIDELERDYPAICTVSVIGQSVEGRDIKMLKISNSDARNS--AIWLDASI 533
+YH I ++ ++ER YP V +G + EGR I+ +KI + RN W+D I
Sbjct: 140 EYHSYQTICDWMKDIERKYPDKAKVFTMGTTSEGRPIQGIKIGSQVWRNDKRIFWIDGGI 199
Query: 534 HSREWISTAVVTYIADYIARNFHS---LPTSITNKDWHIVPILNPDGYE 671
H+REW + + D + +++ + ++ +++I+P+ NPDGYE
Sbjct: 200 HAREWAAVHTALWFIDRLIADYNDDSLVRAAVDRLNFYILPVANPDGYE 248
>Z75714-5|CAB00065.2| 581|Caenorhabditis elegans Hypothetical
protein ZC434.9a protein.
Length = 581
Score = 69.7 bits (163), Expect = 2e-12
Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 5/109 (4%)
Frame = +3
Query: 360 KYHRLNVIYAFIDELERDYPAICTVSVIGQSVEGRDIKMLKISNSDARNS--AIWLDASI 533
+YH I ++ ++ER YP V +G + EGR I+ +KI + RN W+D I
Sbjct: 140 EYHSYQTICDWMKDIERKYPDKAKVFTMGTTSEGRPIQGIKIGSQVWRNDKRIFWIDGGI 199
Query: 534 HSREWISTAVVTYIADYIARNFHS---LPTSITNKDWHIVPILNPDGYE 671
H+REW + + D + +++ + ++ +++I+P+ NPDGYE
Sbjct: 200 HAREWAAVHTALWFIDRLIADYNDDSLVRAAVDRLNFYILPVANPDGYE 248
>Z83122-4|CAB05602.2| 664|Caenorhabditis elegans Hypothetical
protein R11A5.7 protein.
Length = 664
Score = 68.5 bits (160), Expect = 4e-12
Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Frame = +3
Query: 390 FIDELERDYPAICTVSVIGQSVEGRDIKMLKI-SNSDARNSAIWLDASIHSREWISTAVV 566
++ +E YP I + IG + EG+ I+ LKI + S + A+W+D +IH+REW S+
Sbjct: 170 YMRTIEFYYPRIAKIVRIGATHEGKPIEGLKIGARSSHKKRAVWVDGNIHAREWASSHTA 229
Query: 567 TYIADYIARNF---HSLPTSITNKDWHIVPILNPDGYE 671
Y + + + + + D++IVP LNPDGYE
Sbjct: 230 LYFINQLVSEYGKDAQITNYVDTLDFYIVPCLNPDGYE 267
>AC024791-18|AAT81180.1| 438|Caenorhabditis elegans Hypothetical
protein Y47G6A.19b protein.
Length = 438
Score = 67.3 bits (157), Expect = 9e-12
Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 3/107 (2%)
Frame = +3
Query: 360 KYHRLNVIYAFIDELERDYPAICTVSVIGQSVEGRDIKMLKISNSDARNSAIWLDASIHS 539
+Y+ +V+ +++ + + P I + +G ++EGRDI LK + +DA IH+
Sbjct: 95 EYYSYSVLSTWLERIAENMPDIAKLIKVGTTIEGRDILGLKFGKDTPDKKIVVIDAGIHA 154
Query: 540 REWISTAVVTYIADYIARNFHSLP---TSITNKDWHIVPILNPDGYE 671
REW + +Y + I P + N +I+P+LNPDGYE
Sbjct: 155 REWAAIHTASYFINLIVNGREEDPQIQNYLDNIVLYIIPVLNPDGYE 201
>AC024791-16|AAF60674.3| 468|Caenorhabditis elegans Hypothetical
protein Y47G6A.19a protein.
Length = 468
Score = 67.3 bits (157), Expect = 9e-12
Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 3/107 (2%)
Frame = +3
Query: 360 KYHRLNVIYAFIDELERDYPAICTVSVIGQSVEGRDIKMLKISNSDARNSAIWLDASIHS 539
+Y+ +V+ +++ + + P I + +G ++EGRDI LK + +DA IH+
Sbjct: 95 EYYSYSVLSTWLERIAENMPDIAKLIKVGTTIEGRDILGLKFGKDTPDKKIVVIDAGIHA 154
Query: 540 REWISTAVVTYIADYIARNFHSLP---TSITNKDWHIVPILNPDGYE 671
REW + +Y + I P + N +I+P+LNPDGYE
Sbjct: 155 REWAAIHTASYFINLIVNGREEDPQIQNYLDNIVLYIIPVLNPDGYE 201
>AC024791-15|ABQ13056.1| 464|Caenorhabditis elegans Hypothetical
protein Y47G6A.19c protein.
Length = 464
Score = 67.3 bits (157), Expect = 9e-12
Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 3/107 (2%)
Frame = +3
Query: 360 KYHRLNVIYAFIDELERDYPAICTVSVIGQSVEGRDIKMLKISNSDARNSAIWLDASIHS 539
+Y+ +V+ +++ + + P I + +G ++EGRDI LK + +DA IH+
Sbjct: 95 EYYSYSVLSTWLERIAENMPDIAKLIKVGTTIEGRDILGLKFGKDTPDKKIVVIDAGIHA 154
Query: 540 REWISTAVVTYIADYIARNFHSLP---TSITNKDWHIVPILNPDGYE 671
REW + +Y + I P + N +I+P+LNPDGYE
Sbjct: 155 REWAAIHTASYFINLIVNGREEDPQIQNYLDNIVLYIIPVLNPDGYE 201
>Z78413-12|CAB01666.3| 448|Caenorhabditis elegans Hypothetical
protein F02D8.4 protein.
Length = 448
Score = 66.5 bits (155), Expect = 2e-11
Identities = 33/94 (35%), Positives = 51/94 (54%)
Frame = +3
Query: 390 FIDELERDYPAICTVSVIGQSVEGRDIKMLKISNSDARNSAIWLDASIHSREWISTAVVT 569
F++ L + YP + IG S EGR I ++I++ + +W+DA IH+REWIS V
Sbjct: 128 FLNSLAQQYPNDVKLQNIGNSYEGRSITAVRIADDGSSKPIVWIDAGIHAREWISYNVAL 187
Query: 570 YIADYIARNFHSLPTSITNKDWHIVPILNPDGYE 671
Y+ Y + + + + +VP NPDGYE
Sbjct: 188 YLI-YTIVSQPAYRNLLDSVQLVVVPNTNPDGYE 220
>Z78411-5|CAB01647.3| 448|Caenorhabditis elegans Hypothetical
protein F02D8.4 protein.
Length = 448
Score = 66.5 bits (155), Expect = 2e-11
Identities = 33/94 (35%), Positives = 51/94 (54%)
Frame = +3
Query: 390 FIDELERDYPAICTVSVIGQSVEGRDIKMLKISNSDARNSAIWLDASIHSREWISTAVVT 569
F++ L + YP + IG S EGR I ++I++ + +W+DA IH+REWIS V
Sbjct: 128 FLNSLAQQYPNDVKLQNIGNSYEGRSITAVRIADDGSSKPIVWIDAGIHAREWISYNVAL 187
Query: 570 YIADYIARNFHSLPTSITNKDWHIVPILNPDGYE 671
Y+ Y + + + + +VP NPDGYE
Sbjct: 188 YLI-YTIVSQPAYRNLLDSVQLVVVPNTNPDGYE 220
>AF099003-2|AAC68743.2| 454|Caenorhabditis elegans Hypothetical
protein Y59C2A.1 protein.
Length = 454
Score = 63.7 bits (148), Expect = 1e-10
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 11/129 (8%)
Frame = +3
Query: 318 NKPKKRKVKLMNWKK-----YHRLNVIYAFIDELERDYPAICTVSVIGQSVEGRDIKMLK 482
N ++RK + W++ YH N + F+ L + + + S EGR I +K
Sbjct: 127 NSVRRRKRAMKTWQEFDTNAYHSYNEMVEFMKLLSEQKSDMVEMVKVATSSEGRSIYGVK 186
Query: 483 I---SNSDARNSAIWLDASIHSREWISTAVVTYIADYIARNFHSLPTSITNK---DWHIV 644
I S +I +DA +H+REWI+ AV ++ I + P N DW+I+
Sbjct: 187 IHPPGPSPPEKPSIIVDAGVHAREWIAPAVGLFMIRKIVEEYGRNPQVTANLQKFDWYIM 246
Query: 645 PILNPDGYE 671
P +NPDGYE
Sbjct: 247 PQVNPDGYE 255
>U80448-8|AAB37821.3| 1014|Caenorhabditis elegans Hypothetical
protein F59A3.1 protein.
Length = 1014
Score = 55.2 bits (127), Expect = 4e-08
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Frame = +3
Query: 360 KYHRLNVIYAFIDELERDYPAICTVSVIGQSVEGRDIKMLKISNSDARNS----AIWLDA 527
K H N + A++ +YP I + G+SVEGR++ +L IS+ + + +
Sbjct: 77 KNHNYNEMTAWLKATRLNYPNITHLYSAGKSVEGRELWVLIISDKPKEHKLMEPELKIVG 136
Query: 528 SIHSREWISTAVVTYIADYIARNFHS---LPTSITNKDWHIVPILNPDGYE 671
++H E + V Y+A+ + N+ L + N H++P +NPDGYE
Sbjct: 137 NMHGNEVVGREAVLYLAEILCLNYGKNKYLTDLVNNARIHLMPSMNPDGYE 187
>AF098994-3|AAT81188.1| 455|Caenorhabditis elegans Hypothetical
protein T06A4.3b protein.
Length = 455
Score = 55.2 bits (127), Expect = 4e-08
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Frame = +3
Query: 390 FIDELERDYPAICTVSVIGQSVEGRDIKMLKISNSDARNSAIWLDASIHSREWIST-AVV 566
++ +L YP + IG++ EGR+I ++I W+D IH+REW + +
Sbjct: 137 WMKQLVVKYPKMVQYISIGKTTEGRNIDGVEIGGDSRTKKIFWIDGGIHAREWAAPHTAL 196
Query: 567 TYIADYIAR-NFHSLPTSITNKDWHIVPILNPDGYE 671
+I +R N + + + +VP LNPDGYE
Sbjct: 197 FFIHQLTSRANEPGIKKLLNEITFVVVPCLNPDGYE 232
>AF098994-2|AAT81187.1| 505|Caenorhabditis elegans Hypothetical
protein T06A4.3a protein.
Length = 505
Score = 55.2 bits (127), Expect = 4e-08
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Frame = +3
Query: 390 FIDELERDYPAICTVSVIGQSVEGRDIKMLKISNSDARNSAIWLDASIHSREWIST-AVV 566
++ +L YP + IG++ EGR+I ++I W+D IH+REW + +
Sbjct: 137 WMKQLVVKYPKMVQYISIGKTTEGRNIDGVEIGGDSRTKKIFWIDGGIHAREWAAPHTAL 196
Query: 567 TYIADYIAR-NFHSLPTSITNKDWHIVPILNPDGYE 671
+I +R N + + + +VP LNPDGYE
Sbjct: 197 FFIHQLTSRANEPGIKKLLNEITFVVVPCLNPDGYE 232
>Z71267-9|CAA95852.2| 380|Caenorhabditis elegans Hypothetical
protein W01A8.6 protein.
Length = 380
Score = 54.4 bits (125), Expect = 7e-08
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Frame = +3
Query: 390 FIDELERDYPAICTVSVIGQSVEGRDIKMLKISNS---DARNSAIWLDASIHSREWISTA 560
+I + D P+ + IG++ EGR + ++I R A+WLD H+REW +
Sbjct: 44 YIKGVAHDNPSFVQLKTIGRTREGRPLLGVRIGKPALPGKRKIAVWLDGGNHAREWPAFH 103
Query: 561 VVTYIADYIARNFHS---LPTSITNKDWHIVPILNPDGY 668
V Y + + + S + + D ++ P+LNPDG+
Sbjct: 104 VAVYFIEKLVNGYLSDDKITKYVETLDIYVFPVLNPDGF 142
>Z71262-14|CAN99672.1| 380|Caenorhabditis elegans Hypothetical
protein W01A8.6 protein.
Length = 380
Score = 54.4 bits (125), Expect = 7e-08
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Frame = +3
Query: 390 FIDELERDYPAICTVSVIGQSVEGRDIKMLKISNS---DARNSAIWLDASIHSREWISTA 560
+I + D P+ + IG++ EGR + ++I R A+WLD H+REW +
Sbjct: 44 YIKGVAHDNPSFVQLKTIGRTREGRPLLGVRIGKPALPGKRKIAVWLDGGNHAREWPAFH 103
Query: 561 VVTYIADYIARNFHS---LPTSITNKDWHIVPILNPDGY 668
V Y + + + S + + D ++ P+LNPDG+
Sbjct: 104 VAVYFIEKLVNGYLSDDKITKYVETLDIYVFPVLNPDGF 142
>Z81054-7|CAB02881.1| 472|Caenorhabditis elegans Hypothetical
protein F01D4.4 protein.
Length = 472
Score = 50.4 bits (115), Expect = 1e-06
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 8/114 (7%)
Frame = +3
Query: 354 WKKYHRLNVIYAFIDELERDYPAICTVSVIGQSVEGRDIKMLKISNSDARN----SAIWL 521
W YH + A + E+ P I T+ IGQSVEGR + +++ S + + + L
Sbjct: 37 WGHYHNQAQLEAKLGEINEKCPEITTLYEIGQSVEGRPLVVIQFSTTPGEHIPTKPEVKL 96
Query: 522 DASIHSREWISTAVVTYIADYIA----RNFHSLPTSITNKDWHIVPILNPDGYE 671
++H E I ++ A+ + N + + + HI+P +NPDG+E
Sbjct: 97 IGNMHGNEPIGRELLLRFAETLCNGAINNDKEIVQLLNSTSIHILPSMNPDGFE 150
>Z68134-1|CAA92226.2| 492|Caenorhabditis elegans Hypothetical
protein T27A8.1 protein.
Length = 492
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Frame = +3
Query: 393 IDELERDYPAICTVSVIGQSVEGRDIKMLKISNSDARNSAIWLD----ASIHSREWISTA 560
I L R +P + + GQSV+GR++ +L +S + + + A++H E
Sbjct: 68 IHNLHRKFPNLTHIYSAGQSVQGRELWVLVVSRYPIEHRKLIPEFKYVANMHGNEVTGRV 127
Query: 561 VVTYIADYIARNFHS---LPTSITNKDWHIVPILNPDGYE 671
+ +A + N++S + + + H++P +NPDGYE
Sbjct: 128 FLVSLAHTLLENYNSNLWIRQLVDSTRIHLMPSMNPDGYE 167
>AF067618-6|AAC19197.2| 1015|Caenorhabditis elegans Hypothetical
protein F56H1.5 protein.
Length = 1015
Score = 35.9 bits (79), Expect = 0.026
Identities = 29/89 (32%), Positives = 39/89 (43%), Gaps = 9/89 (10%)
Frame = +3
Query: 426 CTVSVIGQSVEGRDIKMLKISN-----SDARNSAIWLDASIHSRE----WISTAVVTYIA 578
C VIG S+ G IKML I+ A I L A +H E WI ++ +
Sbjct: 751 CREDVIGHSLAGNPIKMLTITTPASAAEIAAREVIVLSARVHPGETNASWIMQGILENLL 810
Query: 579 DYIARNFHSLPTSITNKDWHIVPILNPDG 665
+ + L S K IVP++NPDG
Sbjct: 811 CRQSNEMYRLRESFIFK---IVPMINPDG 836
>U23484-1|AAC46766.2| 459|Caenorhabditis elegans Hypothetical
protein EEED8.6 protein.
Length = 459
Score = 29.1 bits (62), Expect = 3.0
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
Frame = +3
Query: 390 FIDELE-RDYPAICTVSVIGQSVEGRDIKMLKISNS----DARNSAIWLDASIHSREWIS 554
+++ELE R YP ++ Q+V+ R + ++ I + I+L A +H E S
Sbjct: 152 WLNELESRKYPFFHR-DLLVQTVQKRRVDLITIDATPDTFQGSKKMIFLTARVHPGESPS 210
Query: 555 TAVVTYIADYIARNFHSLPTSITNKDWHIVPILNPDG 665
+ V+ I +++ + I+P+LNPDG
Sbjct: 211 SHVMHGIIEFLVSKDDRAQKLRKVYCFKIIPMLNPDG 247
>AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical
protein B0205.10 protein.
Length = 455
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +2
Query: 260 KENKTRHSHTKRIKTNCSNE*TKEKKSKINELEEIPQTERD 382
K+ K + S +K K S + K+KKSK PQT D
Sbjct: 257 KKKKNKKSKSKDKKKTASKKNKKKKKSKGESASSTPQTPND 297
>Z70271-2|CAA94236.2| 1256|Caenorhabditis elegans Hypothetical
protein W08D2.5 protein.
Length = 1256
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 309 VPTNKPKKRKVKLMNWKKYHRLNVIYAFIDELERD 413
+PT + RKV + W Y +L Y +ID+L D
Sbjct: 85 IPTENGEMRKVPELRWFVYRKLE--YVWIDDLNSD 117
>L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family
protein 3 protein.
Length = 3343
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 186 ISEHDVDLESNSTIWTENGTQ 248
I++ D L +NSTIW ENG +
Sbjct: 359 ITDSDGPLGANSTIWIENGNE 379
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,029,395
Number of Sequences: 27780
Number of extensions: 276940
Number of successful extensions: 885
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 858
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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