Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10j08
(671 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g71696.2 68414.m08283 carboxypeptidase D, putative similar to... 38 0.008
At1g71696.1 68414.m08284 carboxypeptidase D, putative similar to... 38 0.008
At5g07570.1 68418.m00867 glycine/proline-rich protein contains s... 31 0.70
At5g50260.1 68418.m06224 cysteine proteinase, putative similar t... 30 1.2
At3g58440.1 68416.m06513 meprin and TRAF homology domain-contain... 29 2.8
At5g07980.1 68418.m00928 dentin sialophosphoprotein-related cont... 28 4.9
At3g01450.1 68416.m00069 expressed protein 28 4.9
At5g38690.1 68418.m04678 expressed protein 28 6.5
At2g01560.1 68415.m00080 hypothetical protein 27 8.6
>At1g71696.2 68414.m08283 carboxypeptidase D, putative similar to
carboxypeptidase D [Anas platyrhynchos]
gi|2789654|gb|AAB96915
Length = 491
Score = 37.5 bits (83), Expect = 0.008
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Frame = +3
Query: 441 IGQSVEGRDIKMLKISNSDAR---NSAIWLDASIHSREWISTAVVTYIADYIARNFHSLP 611
IG+SV G + +++IS+ A ++H E + ++ +A++I N+ P
Sbjct: 91 IGKSVNGFPLWVIEISDRPGEIEAEPAFKYIGNVHGDEPVGRELLLRLANWICDNYKKDP 150
Query: 612 TS---ITNKDWHIVPILNPDGY 668
+ + N HI+P LNPDG+
Sbjct: 151 LAQMIVENVHLHIMPSLNPDGF 172
>At1g71696.1 68414.m08284 carboxypeptidase D, putative similar to
carboxypeptidase D [Anas platyrhynchos]
gi|2789654|gb|AAB96915
Length = 422
Score = 37.5 bits (83), Expect = 0.008
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Frame = +3
Query: 441 IGQSVEGRDIKMLKISNSDAR---NSAIWLDASIHSREWISTAVVTYIADYIARNFHSLP 611
IG+SV G + +++IS+ A ++H E + ++ +A++I N+ P
Sbjct: 22 IGKSVNGFPLWVIEISDRPGEIEAEPAFKYIGNVHGDEPVGRELLLRLANWICDNYKKDP 81
Query: 612 TS---ITNKDWHIVPILNPDGY 668
+ + N HI+P LNPDG+
Sbjct: 82 LAQMIVENVHLHIMPSLNPDGF 103
>At5g07570.1 68418.m00867 glycine/proline-rich protein contains
similarity to flagelliform silk protein [Nephila
clavipes] gi|7106224|gb|AAF36090
Length = 1504
Score = 31.1 bits (67), Expect = 0.70
Identities = 19/58 (32%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
Frame = -1
Query: 338 FSFLWFIRW--NNLF*SSWYDCAWFCFLSELSLSTVFSPYSGIGFQIYIVFGNTVGLS 171
FSFLWF RW L W+ C WFC + F GF + G L+
Sbjct: 19 FSFLWFSRWFCCGLCGRFWFRC-WFCCWFQFWFRCRFYCRFDTGFDVRFAAGFAADLT 75
>At5g50260.1 68418.m06224 cysteine proteinase, putative similar to
cysteine endopeptidase precursor CysEP GI:2944446 from
[Ricinus communis]
Length = 361
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 8/69 (11%)
Frame = +3
Query: 165 VLRKTNGISEHDVDLESNSTIW-------TENGTQTKFGKKTKPGTVIPRGLKQIVPTN- 320
VL T G+ H+ D+ES +++W + + +K K V +K I TN
Sbjct: 14 VLETTKGLDFHNKDVESENSLWELYERWRSHHTVARSLEEKAKRFNVFKHNVKHIHETNK 73
Query: 321 KPKKRKVKL 347
K K K+KL
Sbjct: 74 KDKSYKLKL 82
>At3g58440.1 68416.m06513 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 601
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 189 SEHDVDLESNSTIWTENGTQTKFGKK 266
++ DVD E++S +WT++ TK G K
Sbjct: 442 NKEDVDDEASSLVWTDSARDTKTGGK 467
>At5g07980.1 68418.m00928 dentin sialophosphoprotein-related contains
weak similarity to Swiss-Prot:Q9NZW4 dentin
sialophosphoprotein precursor [Homo sapiens]
Length = 1501
Score = 28.3 bits (60), Expect = 4.9
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = +3
Query: 159 SNVLRKTNGISEHDVDLESNSTIWTENGTQTKFGKKTKPGTVIPRGL-KQIVPTNKPKKR 335
SNV +G H V L + + +G+ G + +P G +Q++ NKPKKR
Sbjct: 1222 SNVGSSVDGT--HSVQLSQHFKMQQMSGST--LGAEIPSSESLPHGATEQLLKVNKPKKR 1277
Query: 336 KV---KLMNWKK 362
K +L+ W K
Sbjct: 1278 KTATSELIPWNK 1289
>At3g01450.1 68416.m00069 expressed protein
Length = 326
Score = 28.3 bits (60), Expect = 4.9
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = -1
Query: 455 DRLPNDRDSANGRVIPLQFIYKRVNHVQ 372
D+LP R++A ++ LQ +YK+ +V+
Sbjct: 254 DQLPESREAARAVLLELQTVYKKTTNVE 281
>At5g38690.1 68418.m04678 expressed protein
Length = 572
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 254 VRKENKTRHSHTKRIKTNCSNE*TKEKKSKINELE 358
++K KT+ K I CSNE KKS +++
Sbjct: 163 IKKSRKTKREELKDINNGCSNENVVVKKSNPKKIK 197
>At2g01560.1 68415.m00080 hypothetical protein
Length = 277
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 312 PTNKPKKRKVKLMNWKKYHRLNVIYAFIDELERD 413
P NKP+ ++ K N +K H ++ I++ I+ D
Sbjct: 110 PDNKPRAKRSKGKNKQKQHPISPIHSLIETAPND 143
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,030,293
Number of Sequences: 28952
Number of extensions: 251006
Number of successful extensions: 665
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 664
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1422784080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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