Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10j06
         (656 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    24   0.96 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   3.9  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   3.9  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   3.9  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 24.2 bits (50), Expect = 0.96
 Identities = 9/27 (33%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = +2

Query: 314 LPSRNNL-YRRKIPRVFGNISLCFFFC 391
           +PS++ + YR+++  + G + L FF C
Sbjct: 278 MPSQSAIKYRKQVILMLGTVVLAFFIC 304


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 3/27 (11%)
 Frame = +2

Query: 584 KLLLTMNAY---LITFVLISFVILIYF 655
           K +L  N Y   +I F L  FVIL+Y+
Sbjct: 313 KTVLKTNKYCNFIILFYLSVFVILVYY 339


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 37  FILS*ANYKINSVLNKIN 90
           +IL   +YK+ SV+ KIN
Sbjct: 231 YILCRLHYKLTSVMQKIN 248


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 37  FILS*ANYKINSVLNKIN 90
           +IL   +YK+ SV+ KIN
Sbjct: 231 YILCRLHYKLTSVMQKIN 248


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,202
Number of Sequences: 336
Number of extensions: 3042
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)