Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10j02
         (449 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   4.0  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   5.4  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    20   9.4  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    20   9.4  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    20   9.4  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -3

Query: 384 YPNIIKLKLNYS 349
           +PNI+KLKL+ S
Sbjct: 165 HPNIVKLKLDTS 176



 Score = 21.4 bits (43), Expect = 4.0
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = +1

Query: 82  PYHTRCDANTISQRTCDNPQIYEM 153
           P+   C      Q   DNP +YE+
Sbjct: 356 PWSLYCGEPPCGQLNPDNPNVYEI 379


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -2

Query: 235 PSQHKVLFLRLVPNHHC 185
           PS    LFL +   HHC
Sbjct: 61  PSADYCLFLEMTLAHHC 77


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +1

Query: 184 CNGDLVLDEETGLC 225
           CN  LV DEE   C
Sbjct: 454 CNAGLVFDEEKLWC 467


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 442 FLINYFYYISQKHIFFLILLS 380
           F + Y Y   ++HI+ LI LS
Sbjct: 17  FYLFYCYKTIKQHIYSLISLS 37


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 442 FLINYFYYISQKHIFFLILLS 380
           F + Y Y   ++HI+ LI LS
Sbjct: 17  FYLFYCYKTIKQHIYSLISLS 37


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,395
Number of Sequences: 336
Number of extensions: 2237
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)