Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10j02
(449 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15408| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.77
SB_26224| Best HMM Match : VWD (HMM E-Value=0) 29 1.3
SB_15410| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.3
SB_43576| Best HMM Match : EGF_CA (HMM E-Value=2.7e-38) 29 1.8
SB_39808| Best HMM Match : EGF_CA (HMM E-Value=6.3e-35) 29 1.8
SB_38887| Best HMM Match : EGF_CA (HMM E-Value=6.2e-31) 29 1.8
SB_29649| Best HMM Match : Sushi (HMM E-Value=4.1e-18) 29 1.8
SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0) 28 3.1
SB_20924| Best HMM Match : Albicidin_res (HMM E-Value=0.64) 28 3.1
SB_11375| Best HMM Match : EGF_CA (HMM E-Value=0) 28 3.1
SB_52220| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.1
SB_16796| Best HMM Match : Multi_Drug_Res (HMM E-Value=0.96) 28 3.1
SB_41134| Best HMM Match : EGF_CA (HMM E-Value=0) 28 4.1
SB_13504| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_26085| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.4
SB_48268| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_26369| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_26365| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.2
SB_5000| Best HMM Match : EGF_CA (HMM E-Value=0) 27 7.2
SB_55657| Best HMM Match : EGF_CA (HMM E-Value=0) 27 7.2
SB_50563| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_34822| Best HMM Match : EGF_CA (HMM E-Value=8.9e-09) 27 9.5
>SB_15408| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 779
Score = 30.3 bits (65), Expect = 0.77
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +1
Query: 160 TCGWSRCDCNGDLVLDEETGLCVDLDACQ 246
T G +CDC +D T C D+D C+
Sbjct: 108 TVGSFKCDCGAGRTMDPVTNKCEDVDECK 136
>SB_26224| Best HMM Match : VWD (HMM E-Value=0)
Length = 736
Score = 29.5 bits (63), Expect = 1.3
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = -3
Query: 195 ITIAITSRPSTCITHFVNLWIVASPLRNC---VRITSCVIRMHQTWTVRYACKSIVM 34
+ +A+T++P+T + F W + P C + +T + + +R A K I M
Sbjct: 362 LLMAVTNKPATSVAEFAESWAMPEPNEKCESPLAVTPLTCVVTASSVIRDAAKRICM 418
>SB_15410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1147
Score = 29.5 bits (63), Expect = 1.3
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = +1
Query: 100 DANTISQRTCDNPQIYEM-GYTCGWSRCDCNGDLVLDEETGLCVDLDAC 243
D I++ DN + EM T G CDC L + C D+D C
Sbjct: 252 DCVDINECLVDNGRCSEMCNNTLGSYLCDCGAGFALQPDGRTCRDIDEC 300
Score = 29.1 bits (62), Expect = 1.8
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +1
Query: 160 TCGWSRCDCNGDLVLDEETGLCVDL--DACQL 249
T G RC+C+ L LD CVDL D C +
Sbjct: 14 TPGSYRCECSAGLTLDSIQNACVDLRKDRCYM 45
Score = 28.3 bits (60), Expect = 3.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 160 TCGWSRCDCNGDLVLDEETGLCVDLDACQLKN 255
T G RC+C + LD +T +C+ C + N
Sbjct: 964 TVGSYRCNCPPGIDLDRKTNMCITGSDCVIMN 995
>SB_43576| Best HMM Match : EGF_CA (HMM E-Value=2.7e-38)
Length = 641
Score = 29.1 bits (62), Expect = 1.8
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 160 TCGWSRCDCNGDLVLDEETGLCVDLDAC 243
T G C C+ L DE+ C+D+D C
Sbjct: 331 TVGSYTCSCDTGLAWDEKKRKCIDVDEC 358
>SB_39808| Best HMM Match : EGF_CA (HMM E-Value=6.3e-35)
Length = 850
Score = 29.1 bits (62), Expect = 1.8
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +1
Query: 112 ISQRTCDNPQIYEMGYTCGWSRCDCNGDLVLDEETGLCVDLDAC 243
I + TCD + T G RC CN L ++ C D+D C
Sbjct: 251 IRKHTCDQVCVN----TIGSFRCGCNVGYTLRNDSKTCSDIDEC 290
>SB_38887| Best HMM Match : EGF_CA (HMM E-Value=6.2e-31)
Length = 131
Score = 29.1 bits (62), Expect = 1.8
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 160 TCGWSRCDCNGDLVLDEETGLCVDLDAC 243
T G C C+ L DE+ C+D+D C
Sbjct: 22 TVGSYTCSCDTGLAWDEKKRKCIDVDEC 49
>SB_29649| Best HMM Match : Sushi (HMM E-Value=4.1e-18)
Length = 214
Score = 29.1 bits (62), Expect = 1.8
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 160 TCGWSRCDCNGDLVLDEETGLCVDLDACQLKN 255
T G +C C G + L + CVD++ C N
Sbjct: 19 TAGGVKCSCPGGMALTKGQRTCVDVNECAKNN 50
>SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 921
Score = 28.3 bits (60), Expect = 3.1
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 160 TCGWSRCDCNGDLVLDEETGLCVDLDAC 243
T G +C C LD T CVD+D C
Sbjct: 537 TYGSYKCQCLDGYRLDARTEQCVDIDEC 564
Score = 27.1 bits (57), Expect = 7.2
Identities = 8/32 (25%), Positives = 16/32 (50%)
Frame = +1
Query: 160 TCGWSRCDCNGDLVLDEETGLCVDLDACQLKN 255
T G +C C ++ ++ C D++ C+ N
Sbjct: 413 TAGGYQCQCPRGYIMQQDNKTCEDINECETSN 444
Score = 26.6 bits (56), Expect = 9.5
Identities = 19/62 (30%), Positives = 22/62 (35%), Gaps = 5/62 (8%)
Frame = +1
Query: 85 YHTRCD-ANTISQRTCDNPQIYEMGYTC----GWSRCDCNGDLVLDEETGLCVDLDACQL 249
YH D I C NP + C G C C+ L + C DLD C L
Sbjct: 302 YHLHSDNKQCIDDDECSNPN--RCDHVCINNPGSYACACHKGFFLKLDERSCADLDECFL 359
Query: 250 KN 255
N
Sbjct: 360 LN 361
>SB_20924| Best HMM Match : Albicidin_res (HMM E-Value=0.64)
Length = 136
Score = 28.3 bits (60), Expect = 3.1
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +3
Query: 33 TSQWICRRIVLSTFDASVSHK 95
+S W+ R++V+ FDA+ SHK
Sbjct: 108 SSSWLKRKLVIEEFDATDSHK 128
>SB_11375| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 651
Score = 28.3 bits (60), Expect = 3.1
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 160 TCGWSRCDCNGDLVLDEETGLCVDLDAC 243
T G +C C+ VL CVD+D C
Sbjct: 284 TAGGYQCSCHHGYVLSANQHACVDVDEC 311
>SB_52220| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 28.3 bits (60), Expect = 3.1
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +3
Query: 33 TSQWICRRIVLSTFDASVSHK 95
+S W+ R++V+ FDA+ SHK
Sbjct: 70 SSSWLKRKLVIEEFDATDSHK 90
>SB_16796| Best HMM Match : Multi_Drug_Res (HMM E-Value=0.96)
Length = 725
Score = 28.3 bits (60), Expect = 3.1
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 77 CIRITQDVMRTQFLKGLATIHKFTKWVIHVDGLDVIAMVIWY 202
C R+ Q+V F L KF KW V L V+ +W+
Sbjct: 386 CTRMAQNVTNAYFPIFLTDHLKFGKWTFCVGALVVMGSSLWF 427
>SB_41134| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 802
Score = 27.9 bits (59), Expect = 4.1
Identities = 11/44 (25%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Frame = +1
Query: 127 CDNPQIYEMGYTCGWSR----CDCNGDLVLDEETGLCVDLDACQ 246
C +PQ+ + + C ++ C+C +L+ + C D+D C+
Sbjct: 708 CADPQVNKCQHICNNTQASFHCECREGYILNSDGITCSDIDECK 751
Score = 27.1 bits (57), Expect = 7.2
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +1
Query: 160 TCGWSRCDCNGDLVLDEETGLCVDLDACQLKN 255
T G +C C+ L ++ C D+D C + N
Sbjct: 581 TAGSFKCSCHHGYALTDDGLTCQDIDECAVDN 612
>SB_13504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4924
Score = 27.9 bits (59), Expect = 4.1
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +1
Query: 115 SQRTCDNPQIYEMG-YTCGWSRCDCNGDLVLDEETGLCVDLDACQLKN 255
S TC I +G YTC DC D + C+D++ C+ N
Sbjct: 2112 STNTCPGRCINRLGSYTC-----DCPRGYTFDNSSRRCIDINECERNN 2154
>SB_26085| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 484
Score = 27.5 bits (58), Expect = 5.4
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +1
Query: 178 CDCNGDLVLDEETGLCVDLDACQL 249
C+C ++D+ C+D+D C L
Sbjct: 309 CECESGYLMDDLKAHCIDVDECAL 332
>SB_48268| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4527
Score = 27.1 bits (57), Expect = 7.2
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +1
Query: 55 VSYCPRL-MHPYHTRCDANTISQRTCDNPQIYEMGYTCGWSRCDCNGDLVLDEETGLCVD 231
V Y P+ M T C A + CD + + T +C CN LD + +C D
Sbjct: 453 VRYIPKTWMGNGFTECSAAALHP-PCDT--LCVVADTDSGYQCLCNPGYHLDSDPHICSD 509
Query: 232 LDAC 243
+D C
Sbjct: 510 IDEC 513
>SB_26369| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 27.1 bits (57), Expect = 7.2
Identities = 12/32 (37%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = +1
Query: 91 TRCDANTISQRTCDNPQIYEMGYTC--GWSRC 180
+ C NT+ CDN GYT WS C
Sbjct: 212 SNCSGNTMETEPCDNLCSVNGGYTAWSNWSAC 243
>SB_26365| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 27.1 bits (57), Expect = 7.2
Identities = 12/32 (37%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = +1
Query: 91 TRCDANTISQRTCDNPQIYEMGYTC--GWSRC 180
+ C NT+ CDN GYT WS C
Sbjct: 235 SNCSGNTMETEPCDNLCSVNGGYTAWSNWSAC 266
>SB_5000| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 1050
Score = 27.1 bits (57), Expect = 7.2
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +1
Query: 124 TCDNPQIYEMGYTCGWSRCDCNGDLVLDEETGLCVD 231
TC + E+GYTCG GD V + C D
Sbjct: 388 TCTRDKSEELGYTCGACPSGRTGDGVSCADINECAD 423
>SB_55657| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 868
Score = 27.1 bits (57), Expect = 7.2
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +1
Query: 124 TCDNPQIYEMGYTCGWSRCDCNGDLVLDEETGLCVD 231
TC + E+GYTCG GD V + C D
Sbjct: 214 TCTRDKSEELGYTCGACPSGRTGDGVSCADINECAD 249
>SB_50563| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 26.6 bits (56), Expect = 9.5
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +3
Query: 33 TSQWICRRIVLSTFDASVSHKM 98
+S W+ R++V+ FDA+ HK+
Sbjct: 52 SSSWLKRKLVIEEFDATDPHKI 73
>SB_34822| Best HMM Match : EGF_CA (HMM E-Value=8.9e-09)
Length = 87
Score = 26.6 bits (56), Expect = 9.5
Identities = 14/53 (26%), Positives = 20/53 (37%)
Frame = +1
Query: 97 CDANTISQRTCDNPQIYEMGYTCGWSRCDCNGDLVLDEETGLCVDLDACQLKN 255
C N + C+ Y T G +C C +L + C D D C +N
Sbjct: 5 CAVNNGTTHGCE----YRCNNTQGSYKCSCQQGYLLTSDQRHCADHDECATRN 53
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,965,859
Number of Sequences: 59808
Number of extensions: 289655
Number of successful extensions: 728
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 728
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 896151577
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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