Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10j02
(449 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79756-10|CAL36507.1| 80|Caenorhabditis elegans Hypothetical p... 36 0.010
U50311-12|AAA92315.1| 169|Caenorhabditis elegans Hypothetical p... 33 0.096
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 30 0.89
Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical pr... 27 4.8
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 27 4.8
U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocyto... 27 4.8
U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocyto... 27 4.8
AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein. 27 4.8
AL110479-9|CAB60315.3| 583|Caenorhabditis elegans Hypothetical ... 27 4.8
U80846-2|AAC70887.3| 516|Caenorhabditis elegans Hypothetical pr... 27 6.3
U28732-7|AAB04899.1| 114|Caenorhabditis elegans Hypothetical pr... 27 6.3
AF003148-5|AAB54209.3| 792|Caenorhabditis elegans Hypothetical ... 27 6.3
Z81556-7|CAB04519.1| 569|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z49909-6|CAA90109.1| 214|Caenorhabditis elegans Hypothetical pr... 27 8.3
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl... 27 8.3
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl... 27 8.3
AY303579-1|AAP57301.1| 214|Caenorhabditis elegans cell death-re... 27 8.3
AF067942-7|AAG45571.2| 200|Caenorhabditis elegans Hypothetical ... 27 8.3
AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin relat... 27 8.3
>Z79756-10|CAL36507.1| 80|Caenorhabditis elegans Hypothetical
protein F53C11.9 protein.
Length = 80
Score = 36.3 bits (80), Expect = 0.010
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +1
Query: 100 DANTISQRTCDNPQIYEMGYTCGWSRCDCNGDLVLDEETGLCVDLDAC 243
D + RTC+NP M +RC+C V+D T C+DL C
Sbjct: 31 DCGSPCDRTCENPN--PMCIQMCKARCECKQGFVVDSNTKKCIDLKKC 76
>U50311-12|AAA92315.1| 169|Caenorhabditis elegans Hypothetical
protein C25E10.10 protein.
Length = 169
Score = 33.1 bits (72), Expect = 0.096
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +1
Query: 124 TCDNPQIYEMGYTCGWSRCDCNGDLVLDEETGLCVDLDAC 243
TCDN E C + C C LV D TG CV+ + C
Sbjct: 93 TCDNENP-ECDLVCMTNVCQCKKGLVRDSATGKCVEKNKC 131
>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
ZK783.1 protein.
Length = 2585
Score = 29.9 bits (64), Expect = 0.89
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Frame = +1
Query: 37 HNGFAGVSYCPRLMHPYHTRCD-----ANTISQRTCDNPQIYEMGYTCGWSRCDCNGDLV 201
H+GF G + +P C+ + +C + +IY + S C+C
Sbjct: 1653 HSGFEGDGI-KKCTNPLERSCEDVEKFCGRVDHVSCLSVRIYNGSLS---SVCECEPGFR 1708
Query: 202 LDEETGLCVDLDACQ 246
++E+ CVD+D C+
Sbjct: 1709 FEKESNSCVDIDECE 1723
>Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical protein
F55H12.3 protein.
Length = 2972
Score = 27.5 bits (58), Expect = 4.8
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
Frame = +1
Query: 76 MHPYHT-RCDANTISQRTCDN--PQIYEMGYTCGWSRCDCNGD---LVLDEETGLCVDLD 237
+ PY T CD T D P Y + + G+ C C+ ++LD G CVD D
Sbjct: 854 IQPYDTFECDCTT-DPNFIDPCLPHGYYVQHN-GFYSCQCDVGYKYVLLDSNVGKCVDRD 911
Query: 238 ACQLKN 255
C+ K+
Sbjct: 912 ECEEKS 917
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 27.5 bits (58), Expect = 4.8
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Frame = +1
Query: 157 YTCGWSRC---DCNGDLVLDEETGLCVDLDACQ 246
+TC R DC GDLV ++ TG C + C+
Sbjct: 451 FTCHDGRAFANDCPGDLVFNKATGTCDFAENCE 483
>U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform b
protein.
Length = 681
Score = 27.5 bits (58), Expect = 4.8
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 164 VDGLDVIAMVIWY*TKKQDFVLTWTLANLKMSNLKNLNQESLT 292
VDG+D+ A ++ Q W LA++K NL Q +LT
Sbjct: 313 VDGMDMRAPMMTTGLSAQILAHVWALADIKKCGQLNLEQFALT 355
>U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform a
protein.
Length = 751
Score = 27.5 bits (58), Expect = 4.8
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 164 VDGLDVIAMVIWY*TKKQDFVLTWTLANLKMSNLKNLNQESLT 292
VDG+D+ A ++ Q W LA++K NL Q +LT
Sbjct: 313 VDGMDMRAPMMTTGLSAQILAHVWALADIKKCGQLNLEQFALT 355
>AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein.
Length = 796
Score = 27.5 bits (58), Expect = 4.8
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 164 VDGLDVIAMVIWY*TKKQDFVLTWTLANLKMSNLKNLNQESLT 292
VDG+D+ A ++ Q W LA++K NL Q +LT
Sbjct: 358 VDGMDMRAPMMTTGLSAQILAHVWALADIKKCGQLNLEQFALT 400
>AL110479-9|CAB60315.3| 583|Caenorhabditis elegans Hypothetical
protein Y105C5B.11 protein.
Length = 583
Score = 27.5 bits (58), Expect = 4.8
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +1
Query: 52 GVSYCPRLMHPYHTRCDANTISQRTCDNPQIYEMGY 159
G CPR YH+ C +SQ+ I+ +G+
Sbjct: 540 GTVQCPRCTEIYHSHCATQWLSQKPTCPKCIFHIGH 575
>U80846-2|AAC70887.3| 516|Caenorhabditis elegans Hypothetical
protein K06A9.2 protein.
Length = 516
Score = 27.1 bits (57), Expect = 6.3
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +1
Query: 94 RCDANTISQRTCDNPQIYEMGYTCGWSRCDCNGDLVLDEETGLCVDLDACQLKN 255
R A+ + C P + Y G ++ +G++V + + +C+DLD LKN
Sbjct: 378 RTGASLVDSSMCLTPDNKYL-YVTGTTKRSVDGEIVFEVKP-ICLDLDTMVLKN 429
>U28732-7|AAB04899.1| 114|Caenorhabditis elegans Hypothetical
protein F45E1.2 protein.
Length = 114
Score = 27.1 bits (57), Expect = 6.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -2
Query: 448 FFFLINYFYYISQKHIFFLIL 386
FF L Y+YY S KH + + L
Sbjct: 88 FFLLSYYYYYFSYKHAYSVFL 108
>AF003148-5|AAB54209.3| 792|Caenorhabditis elegans Hypothetical
protein F32B5.7 protein.
Length = 792
Score = 27.1 bits (57), Expect = 6.3
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = -2
Query: 211 LRLVPNHHCNHI*TIHMYNPFRKFVDCRKSFEKLCSHHIL-CDTDASNVDSTIR 53
L ++P + + HM +P DC K K+ H +L D DS++R
Sbjct: 108 LNVIPPLDVHWVWHTHMLSPIHYQEDCEKLVGKIIDHKLLSSDEIQKRYDSSVR 161
>Z81556-7|CAB04519.1| 569|Caenorhabditis elegans Hypothetical
protein F58G1.7 protein.
Length = 569
Score = 26.6 bits (56), Expect = 8.3
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -3
Query: 171 PSTCITHFVNLWIVASPLRNCVRITSCV 88
PS I+ + L ++ PLR+ + IT C+
Sbjct: 109 PSPSISMYYQLRFLSKPLRSIITITQCI 136
>Z49909-6|CAA90109.1| 214|Caenorhabditis elegans Hypothetical
protein C14A4.5 protein.
Length = 214
Score = 26.6 bits (56), Expect = 8.3
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = +1
Query: 94 RCDANTISQRTCDNPQIYEMGYTCGWSRCDCNGDLVLDEETGLCVDLD 237
RC+ + + + D + G TC W+ C GD+ + + + LD
Sbjct: 9 RCELSFL--KNADGSACFSQGATCIWASCSGPGDVHASKASDEAMTLD 54
>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform b protein.
Length = 1590
Score = 26.6 bits (56), Expect = 8.3
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2
Query: 118 EKLCSHHILCDTDASNVDSTI 56
+K HH LCDT +D+T+
Sbjct: 719 DKKHKHHYLCDTGVYTIDATV 739
>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform a protein.
Length = 1604
Score = 26.6 bits (56), Expect = 8.3
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2
Query: 118 EKLCSHHILCDTDASNVDSTI 56
+K HH LCDT +D+T+
Sbjct: 733 DKKHKHHYLCDTGVYTIDATV 753
>AY303579-1|AAP57301.1| 214|Caenorhabditis elegans cell
death-related nuclease 5 protein.
Length = 214
Score = 26.6 bits (56), Expect = 8.3
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = +1
Query: 94 RCDANTISQRTCDNPQIYEMGYTCGWSRCDCNGDLVLDEETGLCVDLD 237
RC+ + + + D + G TC W+ C GD+ + + + LD
Sbjct: 9 RCELSFL--KNADGSACFSQGATCIWASCSGPGDVHASKASDEAMTLD 54
>AF067942-7|AAG45571.2| 200|Caenorhabditis elegans Hypothetical
protein ZK6.3 protein.
Length = 200
Score = 26.6 bits (56), Expect = 8.3
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 88 HTRCDANTISQRTCDNPQIYEMGY-TCGWSRCDCNGDL 198
H + + S + C+N Q Y+M Y C +S D NGD+
Sbjct: 135 HDKVTSIGCSYKNCENDQGYDMRYFICKYSPID-NGDM 171
>AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin related.
see also lmb-protein 1 protein.
Length = 1067
Score = 26.6 bits (56), Expect = 8.3
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 148 EMGYTCGWSRCDCNGDLVLDEETGLC 225
E+G TC RCDCNG++ + E G C
Sbjct: 996 EVGGTC--ERCDCNGNIDMAME-GSC 1018
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,387,505
Number of Sequences: 27780
Number of extensions: 210096
Number of successful extensions: 605
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 604
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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