Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10j02
(449 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g69150.1 68414.m07911 DC1 domain-containing protein contains ... 29 1.1
At5g45520.1 68418.m05591 hypothetical protein 29 1.9
At2g30290.1 68415.m03687 vacuolar sorting receptor, putative sim... 28 2.5
At5g22130.1 68418.m02576 mannosyltransferase family protein simi... 28 3.4
At3g16200.1 68416.m02045 expressed protein 28 3.4
At5g54760.1 68418.m06820 eukaryotic translation initiation facto... 27 4.4
At4g27130.1 68417.m03899 eukaryotic translation initiation facto... 27 4.4
At1g54290.1 68414.m06189 eukaryotic translation initiation facto... 27 4.4
At1g25170.1 68414.m03125 expressed protein nearly identical to A... 27 4.4
At1g25097.1 68414.m03119 expressed protein nearly identical to A... 27 4.4
At1g24996.1 68414.m03115 expressed protein nearly identical to A... 27 4.4
At1g24822.1 68414.m03109 expressed protein nearly identical to A... 27 4.4
At3g42670.1 68416.m04437 SNF2 domain-containing protein / helica... 27 5.9
At2g06925.1 68415.m00790 phospholipase A2 family protein similar... 27 7.7
>At1g69150.1 68414.m07911 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 517
Score = 29.5 bits (63), Expect = 1.1
Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Frame = +1
Query: 79 HPYHTRCDANTIS----QRTCDNPQIYEMGYTCGWSRCDCNGDLVLDEETGLC 225
H +H C NT + +TCDN + + G RC G+ + D +C
Sbjct: 7 HVFHKTCANNTYNIAHPSQTCDNILNHTYNFNIGGGRCAGCGEKIYDSLIYIC 59
>At5g45520.1 68418.m05591 hypothetical protein
Length = 1167
Score = 28.7 bits (61), Expect = 1.9
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +2
Query: 149 KWVIHVDGLDVIAMVIWY*TKKQDFVLTWTLANLKMSNLKNLNQESLTGYERI 307
KW +D L V+ + W T K+ + T M +LKNL S G RI
Sbjct: 375 KWFPLMDSLRVLYLGRWEQTAKRHIEVESTEFLKNMKSLKNLRLASFQGISRI 427
>At2g30290.1 68415.m03687 vacuolar sorting receptor, putative
similar to vacuolar sorting receptor homolog
[Arabidopsis thaliana] GI:1737218
Length = 625
Score = 28.3 bits (60), Expect = 2.5
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +1
Query: 100 DANTISQRTCDNPQIYEMGYTCGWSRCDCNGDLVLDEETGLCVDLDA 240
D N ++T + + T G C C+G L+ E +C++ DA
Sbjct: 516 DVNECEEKTACQCRDCKCKNTWGSYECSCSGSLLYIREHDICINRDA 562
>At5g22130.1 68418.m02576 mannosyltransferase family protein similar
to mannosyltransferase from Rattus norvegicus
[GI:11414877], Homo sapiens [GI:11414879]; contains Pfam
profile PF05007: Mannosyltransferase (PIG-M)
Length = 450
Score = 27.9 bits (59), Expect = 3.4
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -2
Query: 226 HKVLFLRLVPNHHCNHI*TIHMYNPFRKFVDCRKSFEKLCSHHIL 92
HK+L R VP C + + ++NPF + R + E + IL
Sbjct: 111 HKILKQRKVPEKICTYSVMVWLFNPFTFTIGTRGNCEPIVCAMIL 155
>At3g16200.1 68416.m02045 expressed protein
Length = 452
Score = 27.9 bits (59), Expect = 3.4
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -3
Query: 153 HFVNLWIVASPLRNCVRITSCVIRMHQTWTVRYACKSIVMSS 28
H LW +A L+ + I S + H TW +R A M S
Sbjct: 168 HSFGLWFMARWLKPDMMIESGAFKGHSTWVLRQAMPDTPMIS 209
>At5g54760.1 68418.m06820 eukaryotic translation initiation factor
SUI1, putative similar to SP|P32911 Protein translation
factor SUI1 {Saccharomyces cerevisiae}; contains Pfam
profile PF01253: Translation initiation factor SUI1
Length = 113
Score = 27.5 bits (58), Expect = 4.4
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +1
Query: 184 CNGDLVLDEETGLCVDLDACQLKNV 258
CNG +V D E G + L Q KNV
Sbjct: 69 CNGTVVQDSELGQVIQLQGDQRKNV 93
>At4g27130.1 68417.m03899 eukaryotic translation initiation factor
SUI1, putative similar to SP|P32911 Protein translation
factor SUI1 {Saccharomyces cerevisiae}; contains Pfam
profile PF01253: Translation initiation factor SUI1
Length = 113
Score = 27.5 bits (58), Expect = 4.4
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +1
Query: 184 CNGDLVLDEETGLCVDLDACQLKNV 258
CNG +V D E G + L Q KNV
Sbjct: 69 CNGTVVQDSELGQVIQLQGDQRKNV 93
>At1g54290.1 68414.m06189 eukaryotic translation initiation factor
SUI1, putative similar to P|P32911 Protein translation
factor SUI1 {Saccharomyces cerevisiae}; contains Pfam
profile PF01253: Translation initiation factor SUI1
Length = 113
Score = 27.5 bits (58), Expect = 4.4
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +1
Query: 184 CNGDLVLDEETGLCVDLDACQLKNV 258
CNG +V D E G + L Q KNV
Sbjct: 69 CNGTVVQDSELGQVIQLQGDQRKNV 93
>At1g25170.1 68414.m03125 expressed protein nearly identical to
At1g24996, At1g25097, At1g24822
Length = 216
Score = 27.5 bits (58), Expect = 4.4
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +1
Query: 106 NTISQRTCDNP-QIYEMGYTCGWSRCDCNGDLVLDEE 213
NT + TC N Y + G R D +GD+V+D E
Sbjct: 83 NTSAPSTCKNAINFYNVRIATGLYRFDDDGDIVMDAE 119
>At1g25097.1 68414.m03119 expressed protein nearly identical to
At1g24996, At1g25170, At1g24822; similar to ESTs dbj
AV530941.1, dbj|AV530975.1, gb|BE037999.1,
gb|BE037993.1, gb|AI995009.1, gb|AI099531.1,
gb|N37906.1, gb|T76894.1
Length = 216
Score = 27.5 bits (58), Expect = 4.4
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +1
Query: 106 NTISQRTCDNP-QIYEMGYTCGWSRCDCNGDLVLDEE 213
NT + TC N Y + G R D +GD+V+D E
Sbjct: 83 NTSAPSTCKNAINFYNVRIATGLYRFDDDGDIVMDAE 119
>At1g24996.1 68414.m03115 expressed protein nearly identical to
At1g25170, At1g25097, At1g24822; similar to ESTs dbj
AV530941.1, dbj|AV530975.1, gb|BE037999.1,
gb|BE037993.1, gb|AI995009.1, gb|AI099531.1,
gb|N37906.1, gb|T76894.1
Length = 149
Score = 27.5 bits (58), Expect = 4.4
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +1
Query: 106 NTISQRTCDNP-QIYEMGYTCGWSRCDCNGDLVLDEE 213
NT + TC N Y + G R D +GD+V+D E
Sbjct: 83 NTSAPSTCKNAINFYNVRIATGLYRFDDDGDIVMDAE 119
>At1g24822.1 68414.m03109 expressed protein nearly identical to
At1g24996, At1g25170, At1g25097; similar to ESTs dbj
AV530941.1, dbj|AV530975.1, gb|BE037999.1,
gb|BE037993.1, gb|AI995009.1, gb|AI099531.1,
gb|N37906.1, gb|T76894.1
Length = 216
Score = 27.5 bits (58), Expect = 4.4
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +1
Query: 106 NTISQRTCDNP-QIYEMGYTCGWSRCDCNGDLVLDEE 213
NT + TC N Y + G R D +GD+V+D E
Sbjct: 83 NTSAPSTCKNAINFYNVRIATGLYRFDDDGDIVMDAE 119
>At3g42670.1 68416.m04437 SNF2 domain-containing protein / helicase
domain-containing protein low similarity to SP|P41410
DNA repair protein rhp54 (RAD54 homolog)
{Schizosaccharomyces pombe}; contains PFam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain
Length = 1256
Score = 27.1 bits (57), Expect = 5.9
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1
Query: 178 CDCNGDLVLDEETGLCVDL 234
CDC D L+EE G+C L
Sbjct: 579 CDCEHDYELNEEIGMCCRL 597
>At2g06925.1 68415.m00790 phospholipase A2 family protein similar to
secretory low molecular weight phospholipase A2 beta
[Arabidopsis thaliana] GI:25992715; contains INTERPRO
domain IPR001211 phospholipase A2
Length = 148
Score = 26.6 bits (56), Expect = 7.7
Identities = 15/44 (34%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Frame = +1
Query: 127 CDNPQIYEMGYTCGWSRCDCNGDLVLDEETGLCVDLDAC-QLKN 255
C P G CG C G+ D C+ DAC Q KN
Sbjct: 47 CSVPPFLRYGKYCGLLYSGCPGERPCDGLDSCCMKHDACVQSKN 90
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,527,251
Number of Sequences: 28952
Number of extensions: 183239
Number of successful extensions: 439
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 439
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 732537840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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