Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10j01
         (618 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4BYY5 Cluster: Putative uncharacterized protein; n=2; ...    34   3.1  
UniRef50_Q0IP88 Cluster: Os12g0235700 protein; n=10; Oryza sativ...    34   3.1  
UniRef50_Q68JK3 Cluster: Olfactory receptor 3; n=1; Alligator mi...    33   5.5  
UniRef50_UPI00005A576E Cluster: PREDICTED: similar to EGF-like-d...    33   7.2  
UniRef50_A1ZQY4 Cluster: Sodium bile acid symporter family prote...    33   7.2  

>UniRef50_A4BYY5 Cluster: Putative uncharacterized protein; n=2;
           Polaribacter|Rep: Putative uncharacterized protein -
           Polaribacter irgensii 23-P
          Length = 274

 Score = 33.9 bits (74), Expect = 3.1
 Identities = 17/60 (28%), Positives = 36/60 (60%)
 Frame = -1

Query: 345 TSTVRAVNAAAYMNHVAVCGFFMQIPIKSIMLVTKSHSSAMTITYLMYFI*SAYLSNSRQ 166
           TS ++A+   ++   VA+C F +Q+P++ +++ T    + +T+ Y + F+ S +  N RQ
Sbjct: 70  TSNLKAIQIFSFFCFVAMCYFAVQLPLQILIIATP--FAGLTLLYAVPFL-SGFQKNLRQ 126


>UniRef50_Q0IP88 Cluster: Os12g0235700 protein; n=10; Oryza
           sativa|Rep: Os12g0235700 protein - Oryza sativa subsp.
           japonica (Rice)
          Length = 785

 Score = 33.9 bits (74), Expect = 3.1
 Identities = 15/56 (26%), Positives = 33/56 (58%)
 Frame = -1

Query: 381 LIFVNVTIAMVSTSTVRAVNAAAYMNHVAVCGFFMQIPIKSIMLVTKSHSSAMTIT 214
           L F N++ A+  T ++ +    +++N+  +CGF +Q+P +++   T+S  +  T T
Sbjct: 255 LRFNNLSGAIPQTGSLASQGPTSFLNNPGLCGFPLQVPCRAVPPPTQSPPAPTTTT 310


>UniRef50_Q68JK3 Cluster: Olfactory receptor 3; n=1; Alligator
           mississippiensis|Rep: Olfactory receptor 3 - Alligator
           mississippiensis (American alligator)
          Length = 179

 Score = 33.1 bits (72), Expect = 5.5
 Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
 Frame = -1

Query: 438 INNPTTATTVCAIGTEQVMLIFV-NVTIAMVSTSTVRAVNAAAYMNHVAVCGFFMQIPIK 262
           I NP+ +T  C +G +   +  + NV++  + TS    +   AY  HVA+C      P+ 
Sbjct: 15  ILNPSQSTVKCPLGRKHSYMGCIGNVSLIALITSECFLLAMMAYDRHVAICN-----PL- 68

Query: 261 SIMLVTKSHSSAMTITYLMY 202
            +  V  S S+ + +T +MY
Sbjct: 69  -LYTVVMSRSTCLRMTAVMY 87


>UniRef50_UPI00005A576E Cluster: PREDICTED: similar to
           EGF-like-domain, multiple 3; n=1; Canis lupus
           familiaris|Rep: PREDICTED: similar to EGF-like-domain,
           multiple 3 - Canis familiaris
          Length = 1111

 Score = 32.7 bits (71), Expect = 7.2
 Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
 Frame = -3

Query: 421 SHYCLCNWD-GAGHAHLRQRDNSNG*HEHCQSCERCRVHEPCC 296
           SHYC C    G GH    QR   +   + C   + C   E CC
Sbjct: 347 SHYCECVLGAGGGHCSCNQRHQLDSDEKTCIDLDECESGERCC 389


>UniRef50_A1ZQY4 Cluster: Sodium bile acid symporter family protein;
           n=1; Microscilla marina ATCC 23134|Rep: Sodium bile acid
           symporter family protein - Microscilla marina ATCC 23134
          Length = 303

 Score = 32.7 bits (71), Expect = 7.2
 Identities = 11/25 (44%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
 Frame = +2

Query: 92  WGTVL-IAILGILSCSLGVVFHQQH 163
           WGT++ + ++ +L C +GV+ HQQH
Sbjct: 137 WGTLIRVLLITVLPCVVGVIIHQQH 161


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 582,999,053
Number of Sequences: 1657284
Number of extensions: 11522352
Number of successful extensions: 26888
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26874
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44807090004
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)