Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10j01
(618 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L33798-1|AAA51902.1| 1873|Homo sapiens dihydropyridine-sensitive... 31 2.5
BC133671-1|AAI33672.1| 1873|Homo sapiens CACNA1S protein protein. 30 5.7
AL358473-3|CAI12387.1| 1854|Homo sapiens calcium channel, voltag... 30 5.7
AL358473-2|CAI12386.1| 1873|Homo sapiens calcium channel, voltag... 30 5.7
AL139159-2|CAI23206.1| 1854|Homo sapiens calcium channel, voltag... 30 5.7
AL139159-1|CAI23207.1| 1873|Homo sapiens calcium channel, voltag... 30 5.7
AL833964-1|CAD38812.1| 1081|Homo sapiens hypothetical protein pr... 29 9.9
AL590431-1|CAH71259.1| 1888|Homo sapiens nuclear pore membrane g... 29 9.9
AL513546-1|CAH70552.1| 1888|Homo sapiens nuclear pore membrane g... 29 9.9
AL358472-1|CAI14015.1| 1888|Homo sapiens nuclear pore membrane g... 29 9.9
AK128108-1|BAC87279.1| 1423|Homo sapiens protein ( Homo sapiens ... 29 9.9
AK125924-1|BAC86345.1| 1591|Homo sapiens protein ( Homo sapiens ... 29 9.9
>L33798-1|AAA51902.1| 1873|Homo sapiens dihydropyridine-sensitive
L-type calcium channel alpha-1 subunit protein.
Length = 1873
Score = 31.5 bits (68), Expect = 2.5
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = -1
Query: 420 ATTVCAIGTEQVMLIFVNVTIAMVSTSTVRAVNAAAYMNHVAVCGFFMQIPIKSIMLVT 244
A ++ ++G E + V + + +RA+N A + HVA C F I +I+LVT
Sbjct: 877 AVSLISMGLESSAISVVKILRVLRVLRPLRAINRAKGLKHVARCMFVAISTIGNIVLVT 935
>BC133671-1|AAI33672.1| 1873|Homo sapiens CACNA1S protein protein.
Length = 1873
Score = 30.3 bits (65), Expect = 5.7
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = -1
Query: 420 ATTVCAIGTEQVMLIFVNVTIAMVSTSTVRAVNAAAYMNHVAVCGFFMQIPIKSIMLVT 244
A ++ ++G E + V + + +RA+N A + HV C F I +I+LVT
Sbjct: 877 AVSLISMGLESSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCMFVAISTIGNIVLVT 935
>AL358473-3|CAI12387.1| 1854|Homo sapiens calcium channel,
voltage-dependent, L type, alphading protein (CREB) 2
(TORC2) protein.
Length = 1854
Score = 30.3 bits (65), Expect = 5.7
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = -1
Query: 420 ATTVCAIGTEQVMLIFVNVTIAMVSTSTVRAVNAAAYMNHVAVCGFFMQIPIKSIMLVT 244
A ++ ++G E + V + + +RA+N A + HV C F I +I+LVT
Sbjct: 877 AVSLISMGLESSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCMFVAISTIGNIVLVT 935
>AL358473-2|CAI12386.1| 1873|Homo sapiens calcium channel,
voltage-dependent, L type, alphafluid) protein.
Length = 1873
Score = 30.3 bits (65), Expect = 5.7
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = -1
Query: 420 ATTVCAIGTEQVMLIFVNVTIAMVSTSTVRAVNAAAYMNHVAVCGFFMQIPIKSIMLVT 244
A ++ ++G E + V + + +RA+N A + HV C F I +I+LVT
Sbjct: 877 AVSLISMGLESSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCMFVAISTIGNIVLVT 935
>AL139159-2|CAI23206.1| 1854|Homo sapiens calcium channel,
voltage-dependent, L type, alpha protein.
Length = 1854
Score = 30.3 bits (65), Expect = 5.7
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = -1
Query: 420 ATTVCAIGTEQVMLIFVNVTIAMVSTSTVRAVNAAAYMNHVAVCGFFMQIPIKSIMLVT 244
A ++ ++G E + V + + +RA+N A + HV C F I +I+LVT
Sbjct: 877 AVSLISMGLESSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCMFVAISTIGNIVLVT 935
>AL139159-1|CAI23207.1| 1873|Homo sapiens calcium channel,
voltage-dependent, L type, alphase 5 (class III), chi
polypept protein.
Length = 1873
Score = 30.3 bits (65), Expect = 5.7
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = -1
Query: 420 ATTVCAIGTEQVMLIFVNVTIAMVSTSTVRAVNAAAYMNHVAVCGFFMQIPIKSIMLVT 244
A ++ ++G E + V + + +RA+N A + HV C F I +I+LVT
Sbjct: 877 AVSLISMGLESSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCMFVAISTIGNIVLVT 935
>AL833964-1|CAD38812.1| 1081|Homo sapiens hypothetical protein
protein.
Length = 1081
Score = 29.5 bits (63), Expect = 9.9
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = -1
Query: 372 VNVTIAMVSTSTVRAVNAAAYMNHVAVCGFFMQIPIKSIMLVTKSHSSAMTITYL 208
V+V + +V TV NA Y NH V F + LV S +TITY+
Sbjct: 83 VDVELLLVDDVTVVPENATIY-NHPDVKETFSLVEGSGYFLVNSSEQGVVTITYM 136
>AL590431-1|CAH71259.1| 1888|Homo sapiens nuclear pore membrane
glycoprotein 210-like (LOC91181) protein.
Length = 1888
Score = 29.5 bits (63), Expect = 9.9
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = -1
Query: 372 VNVTIAMVSTSTVRAVNAAAYMNHVAVCGFFMQIPIKSIMLVTKSHSSAMTITYL 208
V+V + +V TV NA Y NH V F + LV S +TITY+
Sbjct: 890 VDVELLLVDDVTVVPENATIY-NHPDVKETFSLVEGSGYFLVNSSEQGVVTITYM 943
>AL513546-1|CAH70552.1| 1888|Homo sapiens nuclear pore membrane
glycoprotein 210-like (LOC91181) protein.
Length = 1888
Score = 29.5 bits (63), Expect = 9.9
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = -1
Query: 372 VNVTIAMVSTSTVRAVNAAAYMNHVAVCGFFMQIPIKSIMLVTKSHSSAMTITYL 208
V+V + +V TV NA Y NH V F + LV S +TITY+
Sbjct: 890 VDVELLLVDDVTVVPENATIY-NHPDVKETFSLVEGSGYFLVNSSEQGVVTITYM 943
>AL358472-1|CAI14015.1| 1888|Homo sapiens nuclear pore membrane
glycoprotein 210-like (LOC91181) protein.
Length = 1888
Score = 29.5 bits (63), Expect = 9.9
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = -1
Query: 372 VNVTIAMVSTSTVRAVNAAAYMNHVAVCGFFMQIPIKSIMLVTKSHSSAMTITYL 208
V+V + +V TV NA Y NH V F + LV S +TITY+
Sbjct: 890 VDVELLLVDDVTVVPENATIY-NHPDVKETFSLVEGSGYFLVNSSEQGVVTITYM 943
>AK128108-1|BAC87279.1| 1423|Homo sapiens protein ( Homo sapiens
cDNA FLJ46229 fis, clone TESTI4014932, weakly similar
to Integral membrane glycoprotein gp210 precursor. ).
Length = 1423
Score = 29.5 bits (63), Expect = 9.9
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = -1
Query: 372 VNVTIAMVSTSTVRAVNAAAYMNHVAVCGFFMQIPIKSIMLVTKSHSSAMTITYL 208
V+V + +V TV NA Y NH V F + LV S +TITY+
Sbjct: 425 VDVELLLVGDVTVVPENATIY-NHPDVKETFSLVEGSGYFLVNSSEQGVVTITYM 478
>AK125924-1|BAC86345.1| 1591|Homo sapiens protein ( Homo sapiens
cDNA FLJ43936 fis, clone TESTI4013830, weakly similar
to Integral membrane glycoprotein gp210 precursor. ).
Length = 1591
Score = 29.5 bits (63), Expect = 9.9
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = -1
Query: 372 VNVTIAMVSTSTVRAVNAAAYMNHVAVCGFFMQIPIKSIMLVTKSHSSAMTITYL 208
V+V + +V TV NA Y NH V F + LV S +TITY+
Sbjct: 614 VDVELLLVDDVTVVPENATIY-NHPDVKETFSLVEGSGYFLVNSSEQGVVTITYM 667
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,157,822
Number of Sequences: 237096
Number of extensions: 1667035
Number of successful extensions: 7092
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 6970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7092
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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