Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10j01
         (618 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81124-9|CAB03379.2|  328|Caenorhabditis elegans Hypothetical pr...    30   1.5  
AC006761-4|AAL32243.1|  498|Caenorhabditis elegans Hypothetical ...    29   2.7  
AC006761-3|AAL32244.2|  860|Caenorhabditis elegans Hypothetical ...    29   2.7  
Z67884-2|CAA91808.1|  429|Caenorhabditis elegans Hypothetical pr...    28   4.6  
U21324-5|AAN63436.1|  486|Caenorhabditis elegans Hypothetical pr...    28   4.6  
U21324-4|AAN63435.1|  537|Caenorhabditis elegans Hypothetical pr...    28   4.6  
Z71185-1|CAA94903.1|  290|Caenorhabditis elegans Hypothetical pr...    28   6.1  
Z69902-1|CAA93767.1|  689|Caenorhabditis elegans Hypothetical pr...    28   6.1  
AL117203-6|CAB60419.1|  234|Caenorhabditis elegans Hypothetical ...    28   6.1  

>Z81124-9|CAB03379.2|  328|Caenorhabditis elegans Hypothetical
           protein T21B4.12 protein.
          Length = 328

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 23/88 (26%), Positives = 41/88 (46%)
 Frame = -1

Query: 465 FTTIIKYTQINNPTTATTVCAIGTEQVMLIFVNVTIAMVSTSTVRAVNAAAYMNHVAVCG 286
           FT  I   Q        T+CA+ T   +L+F+ +   ++ +   R  NA     H     
Sbjct: 174 FTPCIDIMQKTFLVVMMTICALTTCCSVLLFIKL---IIHSPNFRVSNAQLANRHRKNRK 230

Query: 285 FFMQIPIKSIMLVTKSHSSAMTITYLMY 202
             +Q  ++SI+++  S +S  TITY ++
Sbjct: 231 LIIQAIVQSILIIVDSLNS--TITYNLF 256


>AC006761-4|AAL32243.1|  498|Caenorhabditis elegans Hypothetical
           protein Y41G9A.4a protein.
          Length = 498

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 98  TVLIAILGILSCSLGVVFHQQHH 166
           T+L A+LGI +C    +F Q+HH
Sbjct: 421 TILFAVLGIAACVFIYLFTQKHH 443


>AC006761-3|AAL32244.2|  860|Caenorhabditis elegans Hypothetical
           protein Y41G9A.4b protein.
          Length = 860

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 98  TVLIAILGILSCSLGVVFHQQHH 166
           T+L A+LGI +C    +F Q+HH
Sbjct: 421 TILFAVLGIAACVFIYLFTQKHH 443


>Z67884-2|CAA91808.1|  429|Caenorhabditis elegans Hypothetical
           protein T14G8.4 protein.
          Length = 429

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
 Frame = -1

Query: 300 VAVCGFFMQIPIKSIMLVTKSHSSAMTITYLMYFI*SA--YLSNSRQWC 160
           +    FF+ IPI  I  + KS   A+ + +L+ F+     +  N   WC
Sbjct: 196 IKTASFFVSIPIHKIFKILKSQILALWLDFLIVFVLLCCFFQLNIVMWC 244


>U21324-5|AAN63436.1|  486|Caenorhabditis elegans Hypothetical
           protein C35D10.7b protein.
          Length = 486

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = +1

Query: 211 VCDSHS*TMAFRYQHYTFNRYLHEKATNSNMVHVRGSVHSSDS 339
           VCD H   +A   Q Y+    + E+    N +HV    HSSDS
Sbjct: 5   VCDIHLEKLAENIQKYS---KIEERKYRENDMHVNDDSHSSDS 44


>U21324-4|AAN63435.1|  537|Caenorhabditis elegans Hypothetical
           protein C35D10.7a protein.
          Length = 537

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = +1

Query: 211 VCDSHS*TMAFRYQHYTFNRYLHEKATNSNMVHVRGSVHSSDS 339
           VCD H   +A   Q Y+    + E+    N +HV    HSSDS
Sbjct: 56  VCDIHLEKLAENIQKYS---KIEERKYRENDMHVNDDSHSSDS 95


>Z71185-1|CAA94903.1|  290|Caenorhabditis elegans Hypothetical
           protein C35A5.1 protein.
          Length = 290

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = -1

Query: 465 FTTIIKYTQINNPTTATTVCAIGTEQVMLIFVNVTIAMVSTSTVRAVN 322
           F T+I    +NN  +  T   IG   ++ IF   +I   + + VRA++
Sbjct: 191 FVTVILMNVVNNEPSEATPFIIGMMVIVNIFATASITGTAMNPVRALS 238


>Z69902-1|CAA93767.1|  689|Caenorhabditis elegans Hypothetical
           protein C47D12.2 protein.
          Length = 689

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 16/69 (23%), Positives = 29/69 (42%)
 Frame = +1

Query: 268 RYLHEKATNSNMVHVRGSVHSSDSARANHCYCHVDEDEHDLLRPNCTNSSGCCWIINLGV 447
           R+L ++ T    V +    H S    ++      DE++ D  +    N++G    I + V
Sbjct: 116 RFLTQRMTEKEFVRIFAKSHESTETESSSTSSSSDEEDDDEQKSENENNNGATKYIPI-V 174

Query: 448 LDNRCEELS 474
             N  EE +
Sbjct: 175 FQNTAEEFT 183


>AL117203-6|CAB60419.1|  234|Caenorhabditis elegans Hypothetical
           protein Y48C3A.9 protein.
          Length = 234

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -1

Query: 129 LSIPKIAMSTVPHFKLMQNRKLSTFGKLSKIDIFFN*NRIQKF 1
           + +P+      P    ++NRK+  F K   I IF   N+I+ F
Sbjct: 191 VGMPRPVGPGAPMVTYLKNRKIEDFSKTKSIHIFRKNNKIRSF 233


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,092,465
Number of Sequences: 27780
Number of extensions: 299453
Number of successful extensions: 778
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 778
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)