Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10i24
         (716 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    26   0.35 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.9  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   5.7  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   5.7  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    22   5.7  

>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +1

Query: 442 ATDELCRLRCSVLDSTTETSN-MFSDVSACQSYCMHITRSEPMRSEKKLG 588
           +++E+ +  C  ++ T   ++  ++D   CQ + + I    P RS  KLG
Sbjct: 163 SSEEVFQFECPKVNETVAATHPRYADPDDCQYFYVCINGDTPRRSGCKLG 212


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -3

Query: 417 IYFCRYSINNFLDILQLIICMYFLRYV 337
           IY+  Y+   F   L L++C+Y+  Y+
Sbjct: 238 IYYFYYAFILFTVHLLLLVCIYYFYYM 264


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -3

Query: 168 TVRVVTCVCASPRHT 124
           T RVV CVCA    T
Sbjct: 914 TARVVRCVCAGSTGT 928


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/28 (25%), Positives = 17/28 (60%)
 Frame = +3

Query: 165 QSPSAIPANQSNVRTQRHPETVQNDDAV 248
           ++P    +++    T+  PET+++ DA+
Sbjct: 272 ENPRTYRSDEGPQITELEPETIESQDAI 299


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/40 (22%), Positives = 21/40 (52%)
 Frame = +1

Query: 235 MMMQCLGAVYSAINVNYLALATVFVIVLLSYLIPDVSQKI 354
           +++Q    V   I + Y     + + +L S L+PD+ +++
Sbjct: 302 ILLQVAWIVLHLIRLMYQVTTNLVLKLLTSPLLPDIKEQV 341


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,835
Number of Sequences: 336
Number of extensions: 3386
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)