Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10i23
         (621 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024776-19|AAK68480.2|  398|Caenorhabditis elegans Hypothetical...    32   0.38 
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical...    28   4.7  
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ...    28   4.7  

>AC024776-19|AAK68480.2|  398|Caenorhabditis elegans Hypothetical
           protein Y41D4B.6 protein.
          Length = 398

 Score = 31.9 bits (69), Expect = 0.38
 Identities = 17/55 (30%), Positives = 22/55 (40%)
 Frame = +2

Query: 224 CKEGRKGGKCDIPCEALLDEDIKDDGVCAIKIFEQEGFKYWPKWEVRCKGQTLPD 388
           C +  KG KCD+PC+     D K D    + I         P +  R K  T  D
Sbjct: 122 CDKNWKGAKCDVPCQEKCTADTKIDNPLKVDIDYSIDLSKLPTFVQRLKETTHVD 176


>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
           protein Y64G10A.7 protein.
          Length = 1651

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
 Frame = +2

Query: 224 CKEGRKGGKCDIPCEALLDEDIKDDGVCAIKIFEQEGFKY---WPKWEVRCKGQTLPDIE 394
           C  G  G KC        +E + ++G C  +     G  Y   WP +E+   G T  DI+
Sbjct: 104 CPVGFTGAKCQYDA----NECMANNGGCEHECVNTIGTYYCRCWPGFELSGDGNTCSDID 159

Query: 395 KC 400
           +C
Sbjct: 160 EC 161


>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
           protein Y64G10A.7 protein.
          Length = 1651

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
 Frame = +2

Query: 224 CKEGRKGGKCDIPCEALLDEDIKDDGVCAIKIFEQEGFKY---WPKWEVRCKGQTLPDIE 394
           C  G  G KC        +E + ++G C  +     G  Y   WP +E+   G T  DI+
Sbjct: 104 CPVGFTGAKCQYDA----NECMANNGGCEHECVNTIGTYYCRCWPGFELSGDGNTCSDID 159

Query: 395 KC 400
           +C
Sbjct: 160 EC 161


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,561,564
Number of Sequences: 27780
Number of extensions: 243879
Number of successful extensions: 696
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 696
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)