Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10i22
         (513 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_03_0406 + 18663986-18664059,18665082-18665405,18665499-186655...    29   2.2  

>02_03_0406 +
           18663986-18664059,18665082-18665405,18665499-18665559,
           18666136-18666282,18666368-18666492,18666619-18666648,
           18666689-18666893,18667532-18667741,18667886-18667888,
           18670034-18670942,18671239-18672069
          Length = 972

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
 Frame = +3

Query: 234 IPSEYRLSFTSPLTTDLC*IRFNGLCEGGLFEC--LQHLEAIHND 362
           IPS + +S  S    DLC  +F+G    G+ +C  L+ L+A HN+
Sbjct: 550 IPSSFCISSLSFAALDLCYNQFSGEIPAGIGKCSALRMLKAGHNN 594


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,932,776
Number of Sequences: 37544
Number of extensions: 176654
Number of successful extensions: 250
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 250
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1106928780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)