Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10i21
(624 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_44955| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 2e-14
SB_33472| Best HMM Match : DUF1309 (HMM E-Value=3.1e-16) 55 4e-08
SB_46589| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 7e-07
SB_41601| Best HMM Match : zf-C2H2 (HMM E-Value=0.0019) 35 0.047
SB_52012| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_33307| Best HMM Match : NAF1 (HMM E-Value=1.5e-18) 30 1.8
SB_1703| Best HMM Match : Extensin_2 (HMM E-Value=0.26) 30 1.8
SB_17040| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_50551| Best HMM Match : Extensin_2 (HMM E-Value=0.41) 29 2.3
SB_51274| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_26213| Best HMM Match : CITED (HMM E-Value=2.5) 29 4.1
SB_58714| Best HMM Match : Linker_histone (HMM E-Value=5.7e-15) 28 7.1
SB_40686| Best HMM Match : rve (HMM E-Value=0.00016) 28 7.1
SB_20679| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_8680| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_24650| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_59679| Best HMM Match : Lectin_C (HMM E-Value=5.3e-10) 27 9.4
SB_34776| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_22545| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
>SB_44955| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 377
Score = 76.2 bits (179), Expect = 2e-14
Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 13/172 (7%)
Frame = +1
Query: 148 TVGHQQHDPSRYRSPMYSFXXXXXXXXXXXXXXXXYRIDR-VTRDGLVSAPAWSFGARFP 324
TVG + HD + +P +SF Y + +T+ G PA+S +R
Sbjct: 154 TVGKKNHDVRKTTNPAFSFGQRHRDFFTQISPGPKYMVPSGLTQCGKDGTPAFSLYSRAK 213
Query: 325 SRAATRAPGPGSHAPERCPPMKDPRAPAYSMGARLGFAPRRAGPAPNAYALKLGSG---- 492
+ + PGPG ++PE+ + +AP+YS G+R +A ++ P+PN+Y+L +G
Sbjct: 214 EKNLSHVPGPGEYSPEKHSIPHERKAPSYSFGSRTKYAQKQITPSPNSYSLPALTGPKVV 273
Query: 493 ----SPAYTMGARV---GF-QAKAKSPGPAVYFQRDANVYRTKPPMYSLGAR 624
+ AY++ R GF + K+PGP Y + YR + YS+ R
Sbjct: 274 NKTSAAAYSLTGRSNNGGFSEDLQKTPGPGTYKVTSPDKYRKRMAAYSMNGR 325
Score = 33.1 bits (72), Expect = 0.19
Identities = 21/74 (28%), Positives = 29/74 (39%), Gaps = 4/74 (5%)
Frame = +1
Query: 145 TTVGHQQHDPSRYRSPMYSFXXXXXXXXXXXXXXXXYRI--DRVTRDGLVSAPAWSFGA- 315
TT + HD +R R P +SF + R+TR G P +S G
Sbjct: 31 TTCNYNMHDVTRNRRPAFSFGNKHMHALTNDCSPGPMYLPDSRITRVGAEGNPKYSLGGT 90
Query: 316 -RFPSRAATRAPGP 354
R+ + R PGP
Sbjct: 91 DRYAKKTILRPPGP 104
Score = 31.1 bits (67), Expect = 0.76
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 310 GARFPSRAATRAPGPGSHAPERCPPMKDPRAPAYSMGAR 426
G F +T+ PGPG H+PE+ M AP S G +
Sbjct: 324 GRNFMPGDSTQKPGPGQHSPEKV-VMHQKAAPKVSFGIK 361
>SB_33472| Best HMM Match : DUF1309 (HMM E-Value=3.1e-16)
Length = 97
Score = 55.2 bits (127), Expect = 4e-08
Identities = 35/97 (36%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Frame = +1
Query: 340 RAPGPGSHAPERCPPMKDPRAPAYSMGARLGFAPRRAGPAPNAYALKLGSGSPAYTMGAR 519
+ P PG+++PE+ P + APAYSMG R R PN Y+ S S + T A
Sbjct: 4 KTPAPGAYSPEKVHPQGERHAPAYSMGGR-----TRYRKLPNKYS----SASYSMTGRAT 54
Query: 520 VGFQAK--AKSPGPAVYFQRDANVYRTKPPMYSLGAR 624
G ++ AK+PGP Y N Y+ + P YS+ R
Sbjct: 55 TGSFSEDLAKAPGPGKYNTTIPNTYKNRQPQYSMLGR 91
>SB_46589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 562
Score = 51.2 bits (117), Expect = 7e-07
Identities = 33/120 (27%), Positives = 47/120 (39%), Gaps = 2/120 (1%)
Frame = +1
Query: 154 GHQQHDPSRYRSPMYSFXXXXXXXXXXXXXXXXYRID-RVTRDGLVSAPAWSFGARFPSR 330
G+ HDP +++ P +SF Y I R+TR G PA++ R
Sbjct: 348 GYNDHDPRKHKKPAWSFGLKLGLKSQNVGPGPAYLIPARITRTGTDGTPAYTLHDRTQLN 407
Query: 331 AATRAPGPGSHAPERCPPMKDPRAPAYSM-GARLGFAPRRAGPAPNAYALKLGSGSPAYT 507
A P PG++ P R PAYSM G P P A++ + G +T
Sbjct: 408 KAFSTPAPGTYKVHN-PDYNKKRMPAYSMNGRNYMTGDNTLKPGPGAHSPEKGGSQSLFT 466
Score = 48.4 bits (110), Expect = 5e-06
Identities = 35/109 (32%), Positives = 50/109 (45%), Gaps = 11/109 (10%)
Frame = +1
Query: 331 AATRAPGPGSHA-PERCPPMK-DPRA---PAYSMGARLGFAPRRAGPAPNAYAL-----K 480
A R PGP + P C DPR PA+S G +LG + GP P AY + +
Sbjct: 331 AMFRGPGPAKYRLPGGCGYNDHDPRKHKKPAWSFGLKLGLKSQNVGPGP-AYLIPARITR 389
Query: 481 LGS-GSPAYTMGARVGFQAKAKSPGPAVYFQRDANVYRTKPPMYSLGAR 624
G+ G+PAYT+ R +P P Y + + + + P YS+ R
Sbjct: 390 TGTDGTPAYTLHDRTQLNKAFSTPAPGTYKVHNPDYNKKRMPAYSMNGR 438
Score = 40.3 bits (90), Expect = 0.001
Identities = 27/95 (28%), Positives = 37/95 (38%), Gaps = 5/95 (5%)
Frame = +1
Query: 295 PAWSFGARFPSRAATRAPGPGSHAPERCPPMKDPRAPAYSMGARLGFAPRRAGPAPNAYA 474
PAWSFG + ++ PGP P R PAY++ R + PAP Y
Sbjct: 360 PAWSFGLKLGLKSQNVGPGPAYLIPARITRTGTDGTPAYTLHDRTQLNKAFSTPAPGTYK 419
Query: 475 LKLGSGS----PAYTMGARVGFQA-KAKSPGPAVY 564
+ + PAY+M R PGP +
Sbjct: 420 VHNPDYNKKRMPAYSMNGRNYMTGDNTLKPGPGAH 454
>SB_41601| Best HMM Match : zf-C2H2 (HMM E-Value=0.0019)
Length = 1008
Score = 35.1 bits (77), Expect = 0.047
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 334 ATRAPGPGSHAPERCPPMKDPRAPAYSMGARLGFAPRRAGPAP 462
+T +PG H+ PPM AP+++ RLG +P R P P
Sbjct: 38 STMSPGTQDHSRTPTPPMSVQNAPSWNQSPRLGMSPARP-PVP 79
>SB_52012| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1143
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = -1
Query: 435 EAESSAHGVGRSAGVLHRGAALGSVRARPWGASSRARRKPGAEAPGGRGHESVPRDPVDA 256
+ SS HG S + R A+ S + R + S +R KP P G+ SV R P D+
Sbjct: 173 KTSSSGHGQHSSRTAVRRSASFSSSQRRT--SESESRSKPAVGKPRPVGNASVVRSPADS 230
>SB_33307| Best HMM Match : NAF1 (HMM E-Value=1.5e-18)
Length = 1085
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +1
Query: 349 GPGSHAPERCPPMKDPRAPAYSMGARLGFAPRRAGP 456
GP +AP R P P PA+ MGAR AP P
Sbjct: 962 GPRHYAPPRAPQSYAPPPPAHFMGARYP-APYHRAP 996
>SB_1703| Best HMM Match : Extensin_2 (HMM E-Value=0.26)
Length = 307
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/68 (29%), Positives = 28/68 (41%)
Frame = +1
Query: 295 PAWSFGARFPSRAATRAPGPGSHAPERCPPMKDPRAPAYSMGARLGFAPRRAGPAPNAYA 474
P W+ + P + RA P APE PP+ RA ++ G R P P N +
Sbjct: 63 PTWTAPQQDPPVDSARARSPPWTAPEPNPPVDSARARSF-RGQRKSQIPTWTAPELNPHV 121
Query: 475 LKLGSGSP 498
S +P
Sbjct: 122 DSATSRNP 129
>SB_17040| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 503 IPWALGSGSKLKPSLRDLRSTSRGTLT 583
+P A G+GSKL P L LR+ G L+
Sbjct: 302 VPKAYGTGSKLSPGLDSLRARQSGMLS 328
>SB_50551| Best HMM Match : Extensin_2 (HMM E-Value=0.41)
Length = 376
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +1
Query: 277 DGLVSAPAWSFGARFPSRAATRAPGPGSHAPERCPPMKDPRAPAYSMGARL 429
+ L + P W+ +P + +A P A ER PP D R G RL
Sbjct: 143 ENLRTIPPWTAPEPYPPVDSAKAGPPMDRARERSPPHVDSRRARSPRGRRL 193
>SB_51274| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 394 PRAPAYSMGARLGFAPRRAGPAPNAYALKLGSG 492
P P+Y G +L F+ AP+ AL LG+G
Sbjct: 221 PGYPSYGHGTQLKFSRHMTSSAPDFNALSLGNG 253
>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1572
Score = 28.7 bits (61), Expect = 4.1
Identities = 23/82 (28%), Positives = 30/82 (36%)
Frame = +1
Query: 328 RAATRAPGPGSHAPERCPPMKDPRAPAYSMGARLGFAPRRAGPAPNAYALKLGSGSPAYT 507
R TR P PG P R PP RAP R + P P ++ ++ YT
Sbjct: 311 RPPTRIPPPGMGPPPRIPP-PPIRAPVDVYPPRAPQGASQTPPYPGSHYSRVPPPDGPYT 369
Query: 508 MGARVGFQAKAKSPGPAVYFQR 573
G + A+ P P R
Sbjct: 370 RALPPG-EPYARMPPPGATHPR 390
>SB_26213| Best HMM Match : CITED (HMM E-Value=2.5)
Length = 172
Score = 28.7 bits (61), Expect = 4.1
Identities = 25/81 (30%), Positives = 31/81 (38%), Gaps = 1/81 (1%)
Frame = +1
Query: 316 RFPSRAATRAPGPGSHAPERCPPMKDPRA-PAYSMGARLGFAPRRAGPAPNAYALKLGSG 492
R PSR + + PG E P PR A+SM A + G + ALK G
Sbjct: 62 RVPSRRRSNSSAPGKVHAEGAAPAPSPRTHAAHSMTAAEPASAPGPGEKGDHTALKAGLS 121
Query: 493 SPAYTMGARVGFQAKAKSPGP 555
A + F A SP P
Sbjct: 122 ELAPRARSSPSFFPMALSPIP 142
>SB_58714| Best HMM Match : Linker_histone (HMM E-Value=5.7e-15)
Length = 169
Score = 27.9 bits (59), Expect = 7.1
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = +1
Query: 352 PGSHAPERCPPMKDPRAPAYSMGARLGFAPRRAGPAPNAYALKLGSGSPAYTMGARVGFQ 531
P AP++ P K + PA S+ +AG P A K + PA A+ G +
Sbjct: 87 PAKAAPKKTPAKKSAKKPAPSVKKTAPNDKTKAGETPKAAGKK--TAKPA---KAKRGKK 141
Query: 532 AKAKSP 549
+KA SP
Sbjct: 142 SKAASP 147
>SB_40686| Best HMM Match : rve (HMM E-Value=0.00016)
Length = 1586
Score = 27.9 bits (59), Expect = 7.1
Identities = 24/80 (30%), Positives = 30/80 (37%), Gaps = 6/80 (7%)
Frame = +1
Query: 304 SFGARFPSRAATRAPGPGSHAPERCPPMKDPRAP----AYSMGARLGFAPRRAGPAPNAY 471
S G R S + + A PG ++ P + PR P A R+ P A P Y
Sbjct: 450 SNGIRGVSSSLSSADEPGMSVSDKRDPQRTPRTPLGLKAERTVHRVTLNPSTASPGETIY 509
Query: 472 --ALKLGSGSPAYTMGARVG 525
LKL G RVG
Sbjct: 510 VAVLKLSEGVTLVPGSLRVG 529
>SB_20679| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 27.9 bits (59), Expect = 7.1
Identities = 22/86 (25%), Positives = 33/86 (38%)
Frame = +1
Query: 292 APAWSFGARFPSRAATRAPGPGSHAPERCPPMKDPRAPAYSMGARLGFAPRRAGPAPNAY 471
+P + G PS A GP S P +D +AP Y+ R+ R AG +A
Sbjct: 2 SPTAAMGKEPPSPTAAMGKGPPSPIAAMEGPSRDSQAP-YAKSCRVS-ESRPAGKRESAP 59
Query: 472 ALKLGSGSPAYTMGARVGFQAKAKSP 549
+K + QA + +P
Sbjct: 60 HIKASQSGRTAATALLIHCQATSSAP 85
>SB_8680| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2462
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 322 PSRAATRAPGPGSHAPERCPPMKDP 396
P +TR+P GSH+P PP P
Sbjct: 2303 PGSNSTRSPSTGSHSPSVPPPPPPP 2327
>SB_24650| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 51
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -2
Query: 545 DLALAWNPTRAPMV*AGE 492
++ALAWN TRAP V AGE
Sbjct: 6 NIALAWNRTRAPRV-AGE 22
>SB_59679| Best HMM Match : Lectin_C (HMM E-Value=5.3e-10)
Length = 849
Score = 27.5 bits (58), Expect = 9.4
Identities = 23/73 (31%), Positives = 26/73 (35%)
Frame = +1
Query: 340 RAPGPGSHAPERCPPMKDPRAPAYSMGARLGFAPRRAGPAPNAYALKLGSGSPAYTMGAR 519
R P P H P PP K P + A P P Y SP Y+MG+
Sbjct: 332 RGPRPHFHVPNWAPPPK----PVKPVSAPC--TPTMFNPCTTPYGYGSTMSSP-YSMGST 384
Query: 520 VGFQAKAKSPGPA 558
G A S G A
Sbjct: 385 YGIVASPYSTGYA 397
>SB_34776| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 51
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -2
Query: 545 DLALAWNPTRAPMV*AGE 492
++ALAWN TRAP V AGE
Sbjct: 6 NIALAWNRTRAPRV-AGE 22
>SB_22545| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 51
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -2
Query: 545 DLALAWNPTRAPMV*AGE 492
++ALAWN TRAP V AGE
Sbjct: 6 NIALAWNRTRAPRV-AGE 22
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,230,061
Number of Sequences: 59808
Number of extensions: 330871
Number of successful extensions: 1245
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1231
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1548368000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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