Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10i18
         (602 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    23   2.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.5  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    22   4.6  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   4.6  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   4.6  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   6.1  

>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 320 IKSALEEDYFLSPEQTEQYFQALSESS 400
           + S L  DYF+   Q  +Y+Q LS  S
Sbjct: 143 VTSYLLFDYFVQRNQEYKYYQILSHLS 169


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -1

Query: 191 GYFLQNPPFFKIFTFC 144
           G++ QNP F   F  C
Sbjct: 445 GFYTQNPGFLAYFEIC 460


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = +2

Query: 353 SPEQTEQYFQALSESSKRWSGPGGTVNRKELIDKQKELQQRQ 478
           SPE+ E +F+ L     R   P     +   I  +KE   RQ
Sbjct: 303 SPEEAETFFRELEAPCPRNYNPADYFIQLLAIVPEKEESSRQ 344


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = +2

Query: 353 SPEQTEQYFQALSESSKRWSGPGGTVNRKELIDKQKELQQRQ 478
           SPE+ E +F+ L     R   P     +   I  +KE   RQ
Sbjct: 303 SPEEAETFFRELEAPCPRNYNPADYFIQLLAIVPEKEESSRQ 344


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +1

Query: 70  KTGKKLENKPEPLKSSKPELATDS 141
           KT K  E+ P P  S  PE+   S
Sbjct: 107 KTWKVEEDSPSPTSSVSPEVKDSS 130


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -3

Query: 432 FTVPPGPDQRFEDSLNA*KYCSV 364
           FT+    +Q FE  L A  YC V
Sbjct: 424 FTIGYDLNQHFETGLPAGSYCDV 446


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,261
Number of Sequences: 336
Number of extensions: 2991
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)