Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10i18
         (602 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   1.4  
AY146729-1|AAO12089.1|  156|Anopheles gambiae odorant-binding pr...    24   3.3  
AF437888-1|AAL84183.1|  154|Anopheles gambiae odorant binding pr...    24   3.3  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    24   3.3  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
 Frame = +1

Query: 85   LENKPEPLKSSKPELATDSEQ---NVKILKKGGF 177
            LE +PE  K  KPE  TD  +    V++  KG F
Sbjct: 2192 LEMEPETAKFGKPEKLTDGRRVRVTVEVFGKGTF 2225


>AY146729-1|AAO12089.1|  156|Anopheles gambiae odorant-binding
           protein AgamOBP5 protein.
          Length = 156

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +2

Query: 290 AILPPERRDKIKSAL 334
           A+LPP+ RDK K A+
Sbjct: 107 AMLPPDMRDKAKEAI 121


>AF437888-1|AAL84183.1|  154|Anopheles gambiae odorant binding
           protein protein.
          Length = 154

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +2

Query: 290 AILPPERRDKIKSAL 334
           A+LPP+ RDK K A+
Sbjct: 105 AMLPPDMRDKAKEAI 119


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1154

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 218  NMERVEMLARPTARRLRSLWDEKCAIL 298
            N   V   A+    +L+  WD++CAIL
Sbjct: 1002 NWSNVCEAAKRITSKLQRCWDDECAIL 1028


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 629,735
Number of Sequences: 2352
Number of extensions: 13012
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58450473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)