BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10i18
(602 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006539-3|AAD14472.1| 498|Homo sapiens BC39498_1 protein. 33 0.77
AC006539-1|AAD14471.1| 78|Homo sapiens BC39498_3 protein. 33 0.77
BC111693-1|AAI11694.1| 739|Homo sapiens PPIG protein protein. 32 1.4
X99717-1|CAA68053.1| 754|Homo sapiens SRcyp protein protein. 32 1.8
U40763-1|AAB40347.1| 754|Homo sapiens CARS-Cyp protein. 32 1.8
BC146790-1|AAI46791.1| 1460|Homo sapiens centrosomal protein 170... 32 1.8
BC078155-1|AAH78155.1| 417|Homo sapiens CEP170 protein protein. 32 1.8
AL606534-4|CAI12944.1| 1584|Homo sapiens centrosomal protein 170... 32 1.8
AL606534-3|CAI12943.1| 1486|Homo sapiens centrosomal protein 170... 32 1.8
AL606534-2|CAI12945.1| 1460|Homo sapiens centrosomal protein 170... 32 1.8
AL606534-1|CAI12942.1| 1557|Homo sapiens centrosomal protein 170... 32 1.8
AC016772-2|AAY24233.1| 571|Homo sapiens unknown protein. 32 1.8
AB022659-1|BAA83380.1| 1460|Homo sapiens KARP-1-binding protein ... 32 1.8
AB022658-1|BAA83379.1| 1486|Homo sapiens KARP-1-binding protein ... 32 1.8
AB022657-1|BAA83378.1| 1584|Homo sapiens KARP-1-binding protein ... 32 1.8
AB007939-1|BAA32315.2| 1472|Homo sapiens KIAA0470 protein protein. 32 1.8
D86976-1|BAA13212.1| 1165|Homo sapiens KIAA0223 protein. 31 2.4
AF308066-1|AAN04658.1| 1136|Homo sapiens minor histocompatibilit... 31 2.4
AC004151-1|AAC03237.1| 996|Homo sapiens D1013901 protein. 31 2.4
BC065223-1|AAH65223.1| 1136|Homo sapiens histocompatibility (min... 31 3.1
BC035564-1|AAH35564.1| 1131|Homo sapiens HMHA1 protein protein. 31 3.1
D50924-1|BAA09483.2| 587|Homo sapiens KIAA0134 protein. 30 5.4
BC146775-1|AAI46776.1| 1320|Homo sapiens TNRC15 protein protein. 29 9.5
AY176045-1|AAO46889.1| 1299|Homo sapiens Grb10 interacting GYF p... 29 9.5
AK001739-1|BAA91873.1| 1100|Homo sapiens protein ( Homo sapiens ... 29 9.5
AB014542-1|BAA31617.2| 1329|Homo sapiens KIAA0642 protein protein. 29 9.5
>AC006539-3|AAD14472.1| 498|Homo sapiens BC39498_1 protein.
Length = 498
Score = 33.1 bits (72), Expect = 0.77
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +2
Query: 320 IKSALEEDYFLSPEQTEQYFQALSESSKRWSGPGGTVNRKELIDKQKELQQRQK-WLVNF 496
I+ +LEE FL+P Q Y + + E+ + G TV++ ELI + L+QRQ+ W V
Sbjct: 11 IEFSLEEWEFLNPAQQSLYRKVMLENYRNLVSLGLTVSKPELISR---LEQRQEPWNVKR 67
Query: 497 SAQVA 511
+A
Sbjct: 68 HETIA 72
>AC006539-1|AAD14471.1| 78|Homo sapiens BC39498_3 protein.
Length = 78
Score = 33.1 bits (72), Expect = 0.77
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +2
Query: 320 IKSALEEDYFLSPEQTEQYFQALSESSKRWSGPGGTVNRKELIDKQKELQQRQK-WLVNF 496
I+ +LEE FL+P Q Y + + E+ + G TV++ ELI + L+QRQ+ W V
Sbjct: 11 IEFSLEEWEFLNPAQQSLYRKVMLENYRNLVSLGLTVSKPELISR---LEQRQEPWNVKR 67
Query: 497 SAQVA 511
+A
Sbjct: 68 HETIA 72
>BC111693-1|AAI11694.1| 739|Homo sapiens PPIG protein protein.
Length = 739
Score = 32.3 bits (70), Expect = 1.4
Identities = 27/119 (22%), Positives = 46/119 (38%)
Frame = +2
Query: 119 NRNWQQIPNRM*KF*KKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSLWDEKCAIL 298
+RN + PNR + KKV SN K +RRN E+ + +R +S K
Sbjct: 394 HRNVSESPNRKNEKEKKVKDHKSNSK-ERDIRRNSEKEDKYKNKVKKRAKSKSRSKSKEK 452
Query: 299 PPERRDKIKSALEEDYFLSPEQTEQYFQALSESSKRWSGPGGTVNRKELIDKQKELQQR 475
+ K E+ + + + + E K+ G R +K K+L+ +
Sbjct: 453 SKSKERDSKHNRNEEKRMRSRSKGRDHENVKEKEKQSDSKGKDQERSRSKEKSKQLESK 511
>X99717-1|CAA68053.1| 754|Homo sapiens SRcyp protein protein.
Length = 754
Score = 31.9 bits (69), Expect = 1.8
Identities = 27/119 (22%), Positives = 46/119 (38%)
Frame = +2
Query: 119 NRNWQQIPNRM*KF*KKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSLWDEKCAIL 298
+RN + PNR + KKV SN K +RRN E+ + +R +S K
Sbjct: 409 HRNVSESPNRKNEKEKKVKDHKSNSK-ERDIRRNSEKDDKYKNKVKKRAKSKSRSKSKEK 467
Query: 299 PPERRDKIKSALEEDYFLSPEQTEQYFQALSESSKRWSGPGGTVNRKELIDKQKELQQR 475
+ K E+ + + + + E K+ G R +K K+L+ +
Sbjct: 468 SKSKERDSKHNRNEEKRMRSRSKGRDHENVKEKEKQSDSKGKDQERSRSKEKSKQLESK 526
>U40763-1|AAB40347.1| 754|Homo sapiens CARS-Cyp protein.
Length = 754
Score = 31.9 bits (69), Expect = 1.8
Identities = 27/119 (22%), Positives = 46/119 (38%)
Frame = +2
Query: 119 NRNWQQIPNRM*KF*KKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSLWDEKCAIL 298
+RN + PNR + KKV SN K +RRN E+ + +R +S K
Sbjct: 409 HRNVSESPNRKNEKEKKVKDHKSNSK-ERDIRRNSEKDDKYKNKVKKRAKSKSRSKSKEK 467
Query: 299 PPERRDKIKSALEEDYFLSPEQTEQYFQALSESSKRWSGPGGTVNRKELIDKQKELQQR 475
+ K E+ + + + + E K+ G R +K K+L+ +
Sbjct: 468 SKSKERDSKHNRNEEKRMRSRSKGRDHENVKEKEKQSDSKGKDQERSRSKEKSKQLESK 526
>BC146790-1|AAI46791.1| 1460|Homo sapiens centrosomal protein 170kDa
protein.
Length = 1460
Score = 31.9 bits (69), Expect = 1.8
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +2
Query: 167 KVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSL 274
+V + S K PP RRN+ R+++LA+P RL SL
Sbjct: 1029 EVSTTSSTSK-PPTGRRNISRIDLLAQPRRTRLGSL 1063
>BC078155-1|AAH78155.1| 417|Homo sapiens CEP170 protein protein.
Length = 417
Score = 31.9 bits (69), Expect = 1.8
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +2
Query: 167 KVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSL 274
+V + S K PP RRN+ R+++LA+P RL SL
Sbjct: 37 EVSTTSSTSK-PPTGRRNISRIDLLAQPRRTRLGSL 71
>AL606534-4|CAI12944.1| 1584|Homo sapiens centrosomal protein 170kDa
protein.
Length = 1584
Score = 31.9 bits (69), Expect = 1.8
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +2
Query: 167 KVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSL 274
+V + S K PP RRN+ R+++LA+P RL SL
Sbjct: 1127 EVSTTSSTSK-PPTGRRNISRIDLLAQPRRTRLGSL 1161
>AL606534-3|CAI12943.1| 1486|Homo sapiens centrosomal protein 170kDa
protein.
Length = 1486
Score = 31.9 bits (69), Expect = 1.8
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +2
Query: 167 KVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSL 274
+V + S K PP RRN+ R+++LA+P RL SL
Sbjct: 1029 EVSTTSSTSK-PPTGRRNISRIDLLAQPRRTRLGSL 1063
>AL606534-2|CAI12945.1| 1460|Homo sapiens centrosomal protein 170kDa
protein.
Length = 1460
Score = 31.9 bits (69), Expect = 1.8
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +2
Query: 167 KVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSL 274
+V + S K PP RRN+ R+++LA+P RL SL
Sbjct: 1029 EVSTTSSTSK-PPTGRRNISRIDLLAQPRRTRLGSL 1063
>AL606534-1|CAI12942.1| 1557|Homo sapiens centrosomal protein 170kDa
protein.
Length = 1557
Score = 31.9 bits (69), Expect = 1.8
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +2
Query: 167 KVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSL 274
+V + S K PP RRN+ R+++LA+P RL SL
Sbjct: 1090 EVSTTSSTSK-PPTGRRNISRIDLLAQPRRTRLGSL 1124
>AC016772-2|AAY24233.1| 571|Homo sapiens unknown protein.
Length = 571
Score = 31.9 bits (69), Expect = 1.8
Identities = 27/119 (22%), Positives = 46/119 (38%)
Frame = +2
Query: 119 NRNWQQIPNRM*KF*KKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSLWDEKCAIL 298
+RN + PNR + KKV SN K +RRN E+ + +R +S K
Sbjct: 226 HRNVSESPNRKNEKEKKVKDHKSNSK-ERDIRRNSEKDDKYKNKVKKRAKSKSRSKSKEK 284
Query: 299 PPERRDKIKSALEEDYFLSPEQTEQYFQALSESSKRWSGPGGTVNRKELIDKQKELQQR 475
+ K E+ + + + + E K+ G R +K K+L+ +
Sbjct: 285 SKSKERDSKHNRNEEKRMRSRSKGRDHENVKEKEKQSDSKGKDQERSRSKEKSKQLESK 343
>AB022659-1|BAA83380.1| 1460|Homo sapiens KARP-1-binding protein 3
protein.
Length = 1460
Score = 31.9 bits (69), Expect = 1.8
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +2
Query: 167 KVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSL 274
+V + S K PP RRN+ R+++LA+P RL SL
Sbjct: 1029 EVSTTSSTSK-PPTGRRNISRIDLLAQPRRTRLGSL 1063
>AB022658-1|BAA83379.1| 1486|Homo sapiens KARP-1-binding protein 2
(KAB2) protein.
Length = 1486
Score = 31.9 bits (69), Expect = 1.8
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +2
Query: 167 KVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSL 274
+V + S K PP RRN+ R+++LA+P RL SL
Sbjct: 1029 EVSTTSSTSK-PPTGRRNISRIDLLAQPRRTRLGSL 1063
>AB022657-1|BAA83378.1| 1584|Homo sapiens KARP-1-binding protein 1
(KAB1) protein.
Length = 1584
Score = 31.9 bits (69), Expect = 1.8
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +2
Query: 167 KVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSL 274
+V + S K PP RRN+ R+++LA+P RL SL
Sbjct: 1127 EVSTTSSTSK-PPTGRRNISRIDLLAQPRRTRLGSL 1161
>AB007939-1|BAA32315.2| 1472|Homo sapiens KIAA0470 protein protein.
Length = 1472
Score = 31.9 bits (69), Expect = 1.8
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +2
Query: 167 KVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSL 274
+V + S K PP RRN+ R+++LA+P RL SL
Sbjct: 1041 EVSTTSSTSK-PPTGRRNISRIDLLAQPRRTRLGSL 1075
>D86976-1|BAA13212.1| 1165|Homo sapiens KIAA0223 protein.
Length = 1165
Score = 31.5 bits (68), Expect = 2.4
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +2
Query: 371 QYFQALSESSKRWSGPGGTVNRKELIDKQKELQQRQKWLVNFSAQVAYHLCDYIAKGQKE 550
++ A +E + S PG + +DK++ L++ K A Y C AK QK+
Sbjct: 449 RFLVAKAEEEQAGSAPGAGSTATKTLDKRRRLEEEAKNKAE-EAMATYRTCVADAKTQKQ 507
Query: 551 MLVSNR---LRSIADVV 592
L + LR I +V+
Sbjct: 508 ELEDTKVTALRQIQEVI 524
>AF308066-1|AAN04658.1| 1136|Homo sapiens minor histocompatibility
antigen HA-1 protein.
Length = 1136
Score = 31.5 bits (68), Expect = 2.4
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +2
Query: 371 QYFQALSESSKRWSGPGGTVNRKELIDKQKELQQRQKWLVNFSAQVAYHLCDYIAKGQKE 550
++ A +E + S PG + +DK++ L++ K A Y C AK QK+
Sbjct: 420 RFLVAKAEEEQAGSAPGAGSTATKTLDKRRRLEEEAKNKAE-EAMATYRTCVADAKTQKQ 478
Query: 551 MLVSNR---LRSIADVV 592
L + LR I +V+
Sbjct: 479 ELEDTKVTALRQIQEVI 495
>AC004151-1|AAC03237.1| 996|Homo sapiens D1013901 protein.
Length = 996
Score = 31.5 bits (68), Expect = 2.4
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +2
Query: 371 QYFQALSESSKRWSGPGGTVNRKELIDKQKELQQRQKWLVNFSAQVAYHLCDYIAKGQKE 550
++ A +E + S PG + +DK++ L++ K A Y C AK QK+
Sbjct: 280 RFLVAKAEEEQAGSAPGAGSTATKTLDKRRRLEEEAKNKAE-EAMATYRTCVADAKTQKQ 338
Query: 551 MLVSNR---LRSIADVV 592
L + LR I +V+
Sbjct: 339 ELEDTKVTALRQIQEVI 355
>BC065223-1|AAH65223.1| 1136|Homo sapiens histocompatibility (minor)
HA-1 protein.
Length = 1136
Score = 31.1 bits (67), Expect = 3.1
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +2
Query: 371 QYFQALSESSKRWSGPGGTVNRKELIDKQKELQQRQKWLVNFSAQVAYHLCDYIAKGQKE 550
++ A +E + S PG + +DK++ L++ K A Y C AK QK+
Sbjct: 420 RFLVAKAEEEQAGSAPGAGGTATKTLDKRRRLEEEAKNKAE-EAMATYRTCVADAKTQKQ 478
Query: 551 MLVSNR---LRSIADVV 592
L + LR I +V+
Sbjct: 479 ELEDTKVTALRQIQEVI 495
>BC035564-1|AAH35564.1| 1131|Homo sapiens HMHA1 protein protein.
Length = 1131
Score = 31.1 bits (67), Expect = 3.1
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +2
Query: 371 QYFQALSESSKRWSGPGGTVNRKELIDKQKELQQRQKWLVNFSAQVAYHLCDYIAKGQKE 550
++ A +E + S PG + +DK++ L++ K A Y C AK QK+
Sbjct: 415 RFLVAKAEEEQAGSAPGAGGTATKTLDKRRRLEEEAKNKAE-EAMATYRTCVADAKTQKQ 473
Query: 551 MLVSNR---LRSIADVV 592
L + LR I +V+
Sbjct: 474 ELEDTKVTALRQIQEVI 490
>D50924-1|BAA09483.2| 587|Homo sapiens KIAA0134 protein.
Length = 587
Score = 30.3 bits (65), Expect = 5.4
Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 2/72 (2%)
Frame = +2
Query: 200 PPRLRRNMERVEMLARPTARRLRSLWDEKCAILPPERRDKIKSAL--EEDYFLSPEQTEQ 373
PPR R +R + P+ WD C PE R ++ A EEDY + Q
Sbjct: 14 PPRTREGRDRRDHHRAPSEEEALEKWDWNC----PETRRLLEDAFFREEDYIRQGSEECQ 69
Query: 374 YFQALSESSKRW 409
F E +R+
Sbjct: 70 KFWTFFERLQRF 81
>BC146775-1|AAI46776.1| 1320|Homo sapiens TNRC15 protein protein.
Length = 1320
Score = 29.5 bits (63), Expect = 9.5
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 9/147 (6%)
Frame = +2
Query: 164 KKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSLWDEKCAILPPERRDKIKSALEED 343
++ + E + +K LRR E+ L R R +E L RR++ + +E+
Sbjct: 800 RREEEELARRKQEEALRRQREQEIALRRQREEEERQQQEEALRRLEERRREEEERRKQEE 859
Query: 344 YFLSPE--------QTEQYFQALSESSKRWSGPGGTVNRKELIDKQKELQ-QRQKWLVNF 496
E + E+ + L E+ R + +E K+KEL+ QRQK L+
Sbjct: 860 LLRKQEEEAAKWAREEEEAQRRLEENRLRMEEEAARLRHEEEERKRKELEVQRQKELMRQ 919
Query: 497 SAQVAYHLCDYIAKGQKEMLVSNRLRS 577
Q L + Q++ L +L S
Sbjct: 920 RQQQQEALRRLQQQQQQQQLAQMKLPS 946
>AY176045-1|AAO46889.1| 1299|Homo sapiens Grb10 interacting GYF
protein 2 protein.
Length = 1299
Score = 29.5 bits (63), Expect = 9.5
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 9/147 (6%)
Frame = +2
Query: 164 KKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSLWDEKCAILPPERRDKIKSALEED 343
++ + E + +K LRR E+ L R R +E L RR++ + +E+
Sbjct: 779 RREEEELARRKQEEALRRQREQEIALRRQREEEERQQQEEALRRLEERRREEEERRKQEE 838
Query: 344 YFLSPE--------QTEQYFQALSESSKRWSGPGGTVNRKELIDKQKELQ-QRQKWLVNF 496
E + E+ + L E+ R + +E K+KEL+ QRQK L+
Sbjct: 839 LLRKQEEEAAKWAREEEEAQRRLEENRLRMEEEAARLRHEEEERKRKELEVQRQKELMRQ 898
Query: 497 SAQVAYHLCDYIAKGQKEMLVSNRLRS 577
Q L + Q++ L +L S
Sbjct: 899 RQQQQEALRRLQQQQQQQQLAQMKLPS 925
>AK001739-1|BAA91873.1| 1100|Homo sapiens protein ( Homo sapiens cDNA
FLJ10877 fis, clone NT2RP4001861. ).
Length = 1100
Score = 29.5 bits (63), Expect = 9.5
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 9/147 (6%)
Frame = +2
Query: 164 KKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSLWDEKCAILPPERRDKIKSALEED 343
++ + E + +K LRR E+ L R R +E L RR++ + +E+
Sbjct: 779 RREEEELARRKQEEALRRQREQEIALRRQREEEERQQQEEALRRLEERRREEEERRKQEE 838
Query: 344 YFLSPE--------QTEQYFQALSESSKRWSGPGGTVNRKELIDKQKELQ-QRQKWLVNF 496
E + E+ + L E+ R + +E K+KEL+ QRQK L+
Sbjct: 839 LLRKQEEEAAKWAREEEEAQRRLEENRLRMEEEAARLRHEEEERKRKELEVQRQKELMRQ 898
Query: 497 SAQVAYHLCDYIAKGQKEMLVSNRLRS 577
Q L + Q++ L +L S
Sbjct: 899 RQQQQEALRRLQQQQQQQQLAQMKLPS 925
>AB014542-1|BAA31617.2| 1329|Homo sapiens KIAA0642 protein protein.
Length = 1329
Score = 29.5 bits (63), Expect = 9.5
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 9/147 (6%)
Frame = +2
Query: 164 KKVDSEGSNQKIPPRLRRNMERVEMLARPTARRLRSLWDEKCAILPPERRDKIKSALEED 343
++ + E + +K LRR E+ L R R +E L RR++ + +E+
Sbjct: 809 RREEEELARRKQEEALRRQREQEIALRRQREEEERQQQEEALRRLEERRREEEERRKQEE 868
Query: 344 YFLSPE--------QTEQYFQALSESSKRWSGPGGTVNRKELIDKQKELQ-QRQKWLVNF 496
E + E+ + L E+ R + +E K+KEL+ QRQK L+
Sbjct: 869 LLRKQEEEAAKWAREEEEAQRRLEENRLRMEEEAARLRHEEEERKRKELEVQRQKELMRQ 928
Query: 497 SAQVAYHLCDYIAKGQKEMLVSNRLRS 577
Q L + Q++ L +L S
Sbjct: 929 RQQQQEALRRLQQQQQQQQLAQMKLPS 955
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,015,705
Number of Sequences: 237096
Number of extensions: 1877210
Number of successful extensions: 5114
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 4865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5114
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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