Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10i14
         (738 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_02_0053 - 6152204-6152329,6152817-6152981,6154698-6154883,615...    33   0.24 
07_01_0411 - 3148576-3148777,3148921-3149078,3149269-3149331           31   0.72 
04_04_1457 - 33741048-33741146,33741647-33741760,33741938-337420...    30   1.7  
08_02_0949 - 22920363-22920685,22922621-22922824,22923170-229232...    30   2.2  
04_04_1470 - 33818394-33818625,33819636-33819743,33819895-33820028     30   2.2  
03_05_0523 - 25173661-25173736,25173780-25174052,25174178-25174188     29   3.9  

>05_02_0053 -
           6152204-6152329,6152817-6152981,6154698-6154883,
           6155055-6155078,6155649-6155822
          Length = 224

 Score = 33.1 bits (72), Expect = 0.24
 Identities = 20/61 (32%), Positives = 31/61 (50%)
 Frame = +1

Query: 58  IEIKNEKEFKNILRTHSEALICAEVYSQFVGACTALDRLFTIIKYDWSNGKIILLKVPSD 237
           I+I + +EF + LR   + L+  E Y  + G+C AL     + +    N  I+ LKV  D
Sbjct: 90  IDIHSTQEFLDALRDAGDRLVIVEFYGTWCGSCRAL--FPRLCRTAVENPDILFLKVNFD 147

Query: 238 E 240
           E
Sbjct: 148 E 148


>07_01_0411 - 3148576-3148777,3148921-3149078,3149269-3149331
          Length = 140

 Score = 31.5 bits (68), Expect = 0.72
 Identities = 18/51 (35%), Positives = 28/51 (54%)
 Frame = +1

Query: 226 VPSDEVDSLRRFRDQSEPVYLFIFVSSFFINEKNKTLNNKGGIGLLSFSDL 378
           VP+ E +  R++R +    +LF+  SS FI  K + L +K  +G  SF  L
Sbjct: 72  VPNIEEEFTRQWRIRFLANFLFLVYSSGFIAHKRRNLTHKMKLGATSFQAL 122


>04_04_1457 - 33741048-33741146,33741647-33741760,33741938-33742052,
            33742154-33742560,33743342-33743476,33743576-33743970,
            33744225-33744916,33745014-33745097,33745195-33745286,
            33745374-33745457,33745535-33745714,33746258-33746302,
            33746399-33746692,33747199-33747585,33747713-33747899,
            33748042-33748118,33748936-33749067,33749315-33749416,
            33749744-33749827,33749902-33749992,33750105-33750178,
            33750644-33750664,33751433-33751477,33752427-33752561,
            33752693-33752752
          Length = 1376

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
 Frame = +1

Query: 94   LRTHSEALICAEVYSQFVGACTALDRLFTIIKYDWSNGKIILLKVPSDEVDSL-RRFRDQ 270
            LR H    +   +      ACTALD +   + +D  + K+    +  D +  L + F+D 
Sbjct: 1192 LRAHGGLDVYLNLLEDDAWACTALDSIAVCLSHDNDHRKVEQALLKKDAIQKLVKFFQDC 1251

Query: 271  SEPVYLFIFVSSFFINEKNKTLN 339
             E  ++ I  +   I  K+  +N
Sbjct: 1252 PEQYFVHILDAFLKIITKSSRIN 1274


>08_02_0949 -
           22920363-22920685,22922621-22922824,22923170-22923263,
           22923376-22923470,22923612-22923783
          Length = 295

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 17/32 (53%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +1

Query: 235 DEVDSL-RRFRDQSEPVYLFIFVSSFFINEKN 327
           DE D L + FRD +E   L  F SS F+NEKN
Sbjct: 82  DEFDELLQSFRDGNEEQQLVGFDSSCFLNEKN 113


>04_04_1470 - 33818394-33818625,33819636-33819743,33819895-33820028
          Length = 157

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 13/45 (28%), Positives = 24/45 (53%)
 Frame = +1

Query: 55  FIEIKNEKEFKNILRTHSEALICAEVYSQFVGACTALDRLFTIIK 189
           F++ K EK  ++ + T    L+  + Y ++ G C  + +L  IIK
Sbjct: 17  FLDFKREKGHRDAIVTQRYLLVERDDYKKYNGICLMVQKLVNIIK 61


>03_05_0523 - 25173661-25173736,25173780-25174052,25174178-25174188
          Length = 119

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
 Frame = -1

Query: 336 QRFVLFVNEKRTYKNKQVHWFALIAESP**IHFIRRHLQQNNFSIAPIVLDDR---EKSI 166
           +R   F+ +KR  + ++  WFA I ++P  +   +  L+  +F ++ I+ D +   +K  
Sbjct: 34  KRKYTFLRDKRESQYEEKSWFAKIHKNPMSLTEKQGGLESRSFHLS-IIQDGKIATDKVH 92

Query: 165 ECSTSAYELAIHFGTDKG 112
            C  S Y + ++ GT KG
Sbjct: 93  RCRNSFY-INLYSGTSKG 109


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,834,174
Number of Sequences: 37544
Number of extensions: 346179
Number of successful extensions: 598
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 598
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)