Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10i14
         (738 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       23   4.0  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    23   4.0  
DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    21   9.1  
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    21   9.1  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    21   9.1  
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    21   9.1  

>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 136 SQFVGACTALDRLFTIIK 189
           S FV  C ++DR + +IK
Sbjct: 125 SSFVLVCISMDRYYAVIK 142


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +1

Query: 19  LIVKMAKRKIDLFIEIKNEKEFKNILRTHSE 111
           L+V++A   +  FI +KN+  F+NI   + E
Sbjct: 92  LLVQIAVA-VYAFIVVKNDDNFRNISEKYQE 121


>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 422 ICFFCFNLNGIVSILYFDSTD 484
           +CF CFNL  +  I+Y   +D
Sbjct: 414 VCFVCFNL--MYWIIYLHISD 432


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 422 ICFFCFNLNGIVSILYFDSTD 484
           +CF CFNL  +  I+Y   +D
Sbjct: 414 VCFVCFNL--MYWIIYLHISD 432


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +2

Query: 251 YGDSAIKANQC 283
           YGD A+K  QC
Sbjct: 33  YGDEALKERQC 43


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 616 LLYILYKCGKFHPP 575
           L+Y + +CGKF  P
Sbjct: 72  LMYQIQQCGKFKEP 85


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,549
Number of Sequences: 438
Number of extensions: 4780
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)