Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10i14
         (738 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g17850.1 68418.m02092 cation exchanger, putative (CAX8) simil...    29   3.2  
At4g29670.2 68417.m04227 thioredoxin family protein contains Pfa...    29   3.2  
At4g29670.1 68417.m04226 thioredoxin family protein contains Pfa...    29   3.2  
At4g15330.1 68417.m02345 cytochrome P450 family protein                29   3.2  
At2g20110.2 68415.m02350 tesmin/TSO1-like CXC domain-containing ...    29   3.2  
At2g20110.1 68415.m02349 tesmin/TSO1-like CXC domain-containing ...    29   3.2  
At3g29800.1 68416.m03792 AAA-type ATPase family contains Pfam pr...    29   4.3  
At5g47690.1 68418.m05887 expressed protein                             28   7.4  
At5g24600.1 68418.m02906 expressed protein contains Pfam profile...    28   7.4  

>At5g17850.1 68418.m02092 cation exchanger, putative (CAX8) similar
           to sodium/calcium exchanger protein [Mus musculus]
           gi|13925661|gb|AAK49407; Ca2+:Cation Antiporter (CaCA)
           Family member PMID:11500563
          Length = 559

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +2

Query: 413 LRDICFFCFNLNGIVSILYFDSTDFCHVVYIFAIY 517
           +RDICFFC  +  +  IL +   +F   +   ++Y
Sbjct: 200 IRDICFFCAAIGSLALILVYGKINFWGALGFCSLY 234


>At4g29670.2 68417.m04227 thioredoxin family protein contains Pfam
           profile PF00085: Thioredoxin
          Length = 236

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 20/71 (28%), Positives = 32/71 (45%)
 Frame = +1

Query: 28  KMAKRKIDLFIEIKNEKEFKNILRTHSEALICAEVYSQFVGACTALDRLFTIIKYDWSNG 207
           K  +R     ++I + +EF + L    E L+  E Y  +  +C AL     + K    + 
Sbjct: 96  KWWERNAPNMVDIHSTEEFLSALSGAGERLVIVEFYGTWCASCRAL--FPKLCKTAVEHP 153

Query: 208 KIILLKVPSDE 240
            I+ LKV  DE
Sbjct: 154 DIVFLKVNFDE 164


>At4g29670.1 68417.m04226 thioredoxin family protein contains Pfam
           profile PF00085: Thioredoxin
          Length = 235

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 20/71 (28%), Positives = 32/71 (45%)
 Frame = +1

Query: 28  KMAKRKIDLFIEIKNEKEFKNILRTHSEALICAEVYSQFVGACTALDRLFTIIKYDWSNG 207
           K  +R     ++I + +EF + L    E L+  E Y  +  +C AL     + K    + 
Sbjct: 96  KWWERNAPNMVDIHSTEEFLSALSGAGERLVIVEFYGTWCASCRAL--FPKLCKTAVEHP 153

Query: 208 KIILLKVPSDE 240
            I+ LKV  DE
Sbjct: 154 DIVFLKVNFDE 164


>At4g15330.1 68417.m02345 cytochrome P450 family protein
          Length = 517

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 19/67 (28%), Positives = 32/67 (47%)
 Frame = +1

Query: 52  LFIEIKNEKEFKNILRTHSEALICAEVYSQFVGACTALDRLFTIIKYDWSNGKIILLKVP 231
           L    ++E     I R+H ++L+   V+  F+GA  A          D  N + IL K+ 
Sbjct: 279 LLAAYRDENTEYKITRSHIKSLLTVNVHEFFIGAADASSIAIQWAMADIINNREILEKL- 337

Query: 232 SDEVDSL 252
            +E+DS+
Sbjct: 338 REEIDSV 344


>At2g20110.2 68415.m02350 tesmin/TSO1-like CXC domain-containing
           protein similar to SP|Q9WTJ6 Tesmin
           (Metallothionein-like 5, testis-specific) {Mus
           musculus}; contains Pfam profile PF03638:
           Tesmin/TSO1-like CXC domain
          Length = 578

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +3

Query: 177 HDHQVRLEQWKNYSAEGAVG*SGFITEIPRSKRTSVLVYF 296
           H H +   Q  N +  GA+G SGF +  P  +R    ++F
Sbjct: 253 HSHNLAYLQHANAAITGAIGSSGFASAPPPKRRKGQEIFF 292


>At2g20110.1 68415.m02349 tesmin/TSO1-like CXC domain-containing
           protein similar to SP|Q9WTJ6 Tesmin
           (Metallothionein-like 5, testis-specific) {Mus
           musculus}; contains Pfam profile PF03638:
           Tesmin/TSO1-like CXC domain
          Length = 571

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +3

Query: 177 HDHQVRLEQWKNYSAEGAVG*SGFITEIPRSKRTSVLVYF 296
           H H +   Q  N +  GA+G SGF +  P  +R    ++F
Sbjct: 253 HSHNLAYLQHANAAITGAIGSSGFASAPPPKRRKGQEIFF 292


>At3g29800.1 68416.m03792 AAA-type ATPase family contains Pfam
           profile: ATPase family PF00004
          Length = 440

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 13/51 (25%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = +1

Query: 64  IKNEKEFKNILRT--HSEALICAEVYSQFVGACTALDRLFTIIKYDWSNGK 210
           +K + + + ++R    S  L+  ++ +   G+  AL +L + + + WSNGK
Sbjct: 234 VKTDFDTRRLIRRVEDSSILLVEDIDTSLEGSKVALSQLLSSLTWPWSNGK 284


>At5g47690.1 68418.m05887 expressed protein
          Length = 1638

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -1

Query: 441 LKQKKQMSRSDD*MKKNLFKF*VRKGQ*SDPPFVVQRFVL 322
           +KQ +Q + + +  KK LF F V     SDPP   Q F++
Sbjct: 506 IKQTQQTADAPEIQKKILFGFRVMSRAFSDPPKTEQNFLI 545


>At5g24600.1 68418.m02906 expressed protein contains Pfam profile
           PF04654: Protein of unknown function, DUF599
          Length = 248

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +1

Query: 484 FLSCCVHICNLYINTGSKNFVSLFTKVAQTEEDEI 588
           F++CCV +C+LY    + + +      A  EE EI
Sbjct: 207 FITCCVLVCSLYFLDLTFDSMKCSVGAADAEEPEI 241


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,262,935
Number of Sequences: 28952
Number of extensions: 309643
Number of successful extensions: 660
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 660
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1624036432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)