Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10i12
         (670 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    25   0.74 
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    24   0.98 
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    24   0.98 
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    23   1.7  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   2.3  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   2.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.3  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   5.2  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   5.2  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   5.2  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    22   5.2  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   6.9  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   6.9  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    21   6.9  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   6.9  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   6.9  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   9.1  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   9.1  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    21   9.1  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    21   9.1  

>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 24.6 bits (51), Expect = 0.74
 Identities = 12/19 (63%), Positives = 12/19 (63%)
 Frame = +1

Query: 253 EAARLPMPAVLWRGDAATA 309
           EA R P PAV   GDAA A
Sbjct: 272 EAERAPAPAVRAAGDAAAA 290


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +3

Query: 225 RSTKHACSIRGRPTADARSTLEGRCRNCRLGRRAAGVGM 341
           R+ ++ C  +   +     T   +CR CRL ++   VGM
Sbjct: 68  RNRQYVCKAKDEGSCIIDKTHRNQCRACRL-KKCQNVGM 105


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +3

Query: 225 RSTKHACSIRGRPTADARSTLEGRCRNCRLGRRAAGVGM 341
           R+ ++ C  +   +     T   +CR CRL ++   VGM
Sbjct: 68  RNRQYVCKAKDEGSCIIDKTHRNQCRACRL-KKCQNVGM 105


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 12  YISTLWILFCNPKS 53
           Y  TLW+ F NPKS
Sbjct: 317 YDDTLWVGFDNPKS 330


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +1

Query: 619 VGPLRAAHAASWGPL 663
           VGPL  +  ASW PL
Sbjct: 420 VGPLLTSALASWSPL 434


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 404 TPTSRYDQPNAFLDKLQSKYPMLYSIL 484
           TP+S YD+P     KL   YP+L  ++
Sbjct: 19  TPSSIYDKPTKLYQKL---YPVLMFLI 42


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +1

Query: 286 WRGDAATAAWEGGRLESE*DNGSSPRSKTVSRA 384
           W G    +  EG +LE + D GS   +   S A
Sbjct: 14  WEGGEEGSPEEGDKLEGDEDTGSMTPNSAASPA 46


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 108 SILFVCLSVYTKILNCSF 55
           SI+FVC S+    L C F
Sbjct: 220 SIVFVCFSLVEDTLPCVF 237


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 547 VSGLVSISVDPLLELWRRFVL 485
           +S  V   +  +LE+WRRF +
Sbjct: 165 ISATVCFMMLLMLEIWRRFTI 185


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 547 VSGLVSISVDPLLELWRRFVL 485
           +S  V   +  +LE+WRRF +
Sbjct: 161 ISATVCFMMLLMLEIWRRFTI 181


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = +1

Query: 118 HHLQKRLSVAELTSCGWRWGNLR 186
           H L   L    LTS G +W N R
Sbjct: 105 HFLHSWLGTGLLTSAGPKWQNRR 127


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +3

Query: 78  CKRTNIQTRWIIISPPTEKIICGRTYL 158
           C+R +I+    ++S  T  ++CG T L
Sbjct: 65  CERRHIKGAIPVVSLSTCSMLCGSTQL 91


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 11/25 (44%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
 Frame = +2

Query: 197 TPKLSG-QELAFYQACMQHTRPPDC 268
           +P LS   +L+  Q C    RPPDC
Sbjct: 538 SPPLSQIHDLSPDQFCNGDNRPPDC 562


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +2

Query: 230 YQACMQHTRPPDCRCPQYSGGEMPQLPPGKEG 325
           Y +C++   P D    +  GG+ P+L     G
Sbjct: 19  YISCLKGKMPIDLVIDERDGGKPPELTGSTNG 50


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +2

Query: 230 YQACMQHTRPPDCRCPQYSGGEMPQLPPGKEG 325
           Y +C++   P D    +  GG+ P+L     G
Sbjct: 175 YISCLKGKMPIDLVIDERDGGKPPELTGSTNG 206


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -2

Query: 243 MHAW*NANS*PDSFGVSARPEVSPSP 166
           ++ W   +S P  + +SA+P  S SP
Sbjct: 321 INCWSLTSSPPPPYQISAQPTPSQSP 346


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 212 QTVLVCQLGLRFPHRHPHEV 153
           QT L   LGL FP++   EV
Sbjct: 204 QTQLPLNLGLDFPYQGKFEV 223


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -2

Query: 579 APGPVSQ*STL*VVLFRSLSILCLSSGDASF 487
           +P P S+ S L       LS+ CL++G  +F
Sbjct: 230 SPNPASRSSCLGSNTSSMLSLNCLNTGRTNF 260


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -2

Query: 579 APGPVSQ*STL*VVLFRSLSILCLSSGDASF 487
           +P P S+ S L       LS+ CL++G  +F
Sbjct: 19  SPNPASRSSCLGSNTSSMLSLNCLNTGRTNF 49


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -2

Query: 579 APGPVSQ*STL*VVLFRSLSILCLSSGDASF 487
           +P P S+ S L       LS+ CL++G  +F
Sbjct: 19  SPNPASRSSCLGSNTSSMLSLNCLNTGRTNF 49


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,019
Number of Sequences: 336
Number of extensions: 4345
Number of successful extensions: 26
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)