Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10i12
         (670 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    28   0.092
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       25   0.65 
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    24   1.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    24   1.5  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   2.6  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      23   2.6  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   8.0  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 27.9 bits (59), Expect = 0.092
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -1

Query: 622 RPTVIGCSLQTLEFSSGSCFAVIY 551
           RPT I C +Q   F++G CF V+Y
Sbjct: 715 RPTDIVCGIQ--RFAAGFCFTVVY 736


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 25.0 bits (52), Expect = 0.65
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +2

Query: 311 PGKEGGWSRNEIMGPLLDPKLYPVRVAASPE 403
           P KE   + N++M PL +P ++  +   SPE
Sbjct: 641 PDKEHVLAHNDLMSPLDEPAVHIKQEGQSPE 671


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +1

Query: 61  TIQNFSVNGQTYKQDGSLSHHLQKRLSVAELTS 159
           +++N S+NG   +   S  H LQ RL   + TS
Sbjct: 187 SLENISLNGIDPELTESEQHRLQNRLYTNDSTS 219


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +1

Query: 61  TIQNFSVNGQTYKQDGSLSHHLQKRLSVAELTS 159
           +++N S+NG   +   S  H LQ RL   + TS
Sbjct: 225 SLENISLNGIDPELTESEQHRLQNRLYTNDSTS 257


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 291 PPEYCGHRQSGGLVCCMHAW 232
           P E  G+R + G V  +H W
Sbjct: 405 PIELSGYRLTAGTVVLLHTW 424


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/23 (47%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
 Frame = -2

Query: 318 FPGGSCGISPPEYCGHRQ-SGGL 253
           FPG   G+ PP+  G  Q S GL
Sbjct: 326 FPGMGHGLQPPDLAGTSQGSAGL 348


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 213 PDSFGVSARPEVSPSPPT 160
           PD   V   PE  P+PP+
Sbjct: 285 PDPGEVDLPPETQPTPPS 302


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,379
Number of Sequences: 438
Number of extensions: 5161
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)