Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10i07
         (723 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    24   1.7  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    23   2.2  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    23   2.2  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    23   2.2  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    23   2.2  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   2.9  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   3.9  
S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor prot...    22   6.7  

>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 388 GYKLVLFGSISVNITGLLSLSMFLILC 308
           GY L+  GS+ VN   L+ L   + +C
Sbjct: 66  GYVLIHIGSVPVNNINLILLQNIIDIC 92


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 394 CCGYKLVLFGSISVNITGLLSLSMFLILCI 305
           C G    L   +S+++T L S  +F ILCI
Sbjct: 9   CAGGGGRLSSVLSLSLTSLASSLIFTILCI 38


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 394 CCGYKLVLFGSISVNITGLLSLSMFLILCI 305
           C G    L   +S+++T L S  +F ILCI
Sbjct: 9   CAGGGGRLSSVLSLSLTSLASSLIFTILCI 38


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 394 CCGYKLVLFGSISVNITGLLSLSMFLILCI 305
           C G    L   +S+++T L S  +F ILCI
Sbjct: 9   CAGGGGRLSSVLSLSLTSLASSLIFTILCI 38


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 394 CCGYKLVLFGSISVNITGLLSLSMFLILCI 305
           C G    L   +S+++T L S  +F ILCI
Sbjct: 9   CAGGGGRLSSVLSLSLTSLASSLIFTILCI 38


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 105 IKMGNQNIKAAQNKFCDKQMSAGDVGTFSNG 197
           +KMG +NIKA   +F  +  +A  +G    G
Sbjct: 435 MKMGKRNIKAQVKRFRMETKAAKTLGIIVGG 465


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 655 HWRAVFVFRGDPRV 696
           HW  V+ F GD R+
Sbjct: 211 HWHLVYPFEGDIRI 224


>S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor
           protein.
          Length = 90

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -2

Query: 206 YIRAI*KCSHIACTHLFVTKLILCRFNILISHFN 105
           Y R +     +ACT  F+  +I+  F+ L S F+
Sbjct: 37  YFRDLQPLFKLACTDTFMEGVIVLAFSGLFSVFS 70


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,781
Number of Sequences: 438
Number of extensions: 3899
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22413960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)