BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmte10i06 (315 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 11_04_0453 - 17886095-17886868,17887928-17888043,17888300-178884... 28 1.8 06_03_0288 - 19179619-19179714,19180209-19180300,19180408-191804... 27 3.1 04_03_0776 - 19463473-19464252,19464354-19464849,19465460-19465911 27 3.1 05_05_0268 + 23720837-23720914,23722398-23722486,23722669-237228... 27 4.1 03_05_0472 - 24655384-24655764,24655904-24656119,24656197-246563... 26 5.4 11_06_0267 + 21795762-21796190 26 7.1 11_07_0005 + 27237673-27237885,27238030-27238195,27238439-272386... 25 9.4 09_02_0276 - 6633919-6634296,6635432-6635533,6635636-6635728,663... 25 9.4 08_02_1079 + 24190453-24190483,24191201-24191475,24191619-241919... 25 9.4 05_05_0298 - 23926266-23926442,23926573-23926632,23926822-239270... 25 9.4 >11_04_0453 - 17886095-17886868,17887928-17888043,17888300-17888423, 17889734-17889963,17891395-17891452 Length = 433 Score = 27.9 bits (59), Expect = 1.8 Identities = 11/24 (45%), Positives = 16/24 (66%) Frame = +2 Query: 98 LCSPIYFCRQITNSKIILRLLRCP 169 L S +YFC+++TNS +I CP Sbjct: 228 LQSVLYFCQRMTNSALITVAKNCP 251 >06_03_0288 - 19179619-19179714,19180209-19180300,19180408-19180494, 19180802-19180963,19181032-19181183,19181526-19181872 Length = 311 Score = 27.1 bits (57), Expect = 3.1 Identities = 9/17 (52%), Positives = 14/17 (82%) Frame = -1 Query: 228 NVFSQNFHIFIFYEQFL 178 NVFS +F +++FY+ FL Sbjct: 155 NVFSPSFRLYLFYQTFL 171 >04_03_0776 - 19463473-19464252,19464354-19464849,19465460-19465911 Length = 575 Score = 27.1 bits (57), Expect = 3.1 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = +2 Query: 98 LCSPIYFCRQITNSKIILRLLRCP 169 L S +YFC Q+TN+ ++ CP Sbjct: 369 LNSLLYFCHQMTNAALVTVAKNCP 392 >05_05_0268 + 23720837-23720914,23722398-23722486,23722669-23722807, 23722899-23722973,23723069-23723190,23723287-23723362, 23723786-23723845,23723939-23724091 Length = 263 Score = 26.6 bits (56), Expect = 4.1 Identities = 9/20 (45%), Positives = 14/20 (70%) Frame = -2 Query: 272 EITIRCYRAYNGYN*MFSLK 213 E++ RCY+ YNG N + L+ Sbjct: 33 EVSSRCYKGYNGLNELHKLE 52 >03_05_0472 - 24655384-24655764,24655904-24656119,24656197-24656321, 24656432-24656621,24656817-24656911,24657230-24657454, 24657940-24658003 Length = 431 Score = 26.2 bits (55), Expect = 5.4 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = +3 Query: 78 WLGCSNVFVLLYISVA 125 WLG S VF L+YI +A Sbjct: 169 WLGLSTVFSLIYIMIA 184 >11_06_0267 + 21795762-21796190 Length = 142 Score = 25.8 bits (54), Expect = 7.1 Identities = 12/37 (32%), Positives = 21/37 (56%) Frame = +3 Query: 153 GY*DVPGYLKIVHKI*KCESFERKHSVVSIVSSITAY 263 GY G++ IVH+ K +F++ VS + +TA+ Sbjct: 49 GYNRANGFMWIVHRKKKEHTFKKIKQTVSYATEVTAF 85 >11_07_0005 + 27237673-27237885,27238030-27238195,27238439-27238692, 27238777-27238989,27239063-27239155,27239258-27239359, 27240495-27240872 Length = 472 Score = 25.4 bits (53), Expect = 9.4 Identities = 7/18 (38%), Positives = 15/18 (83%) Frame = -1 Query: 207 HIFIFYEQFLDNQGHLNN 154 H+F ++Q+ D++G++NN Sbjct: 188 HVFPHWKQYKDDEGYINN 205 >09_02_0276 - 6633919-6634296,6635432-6635533,6635636-6635728, 6635802-6636014,6636099-6636352,6636596-6636761, 6636906-6637118 Length = 472 Score = 25.4 bits (53), Expect = 9.4 Identities = 7/18 (38%), Positives = 15/18 (83%) Frame = -1 Query: 207 HIFIFYEQFLDNQGHLNN 154 H+F ++Q+ D++G++NN Sbjct: 188 HVFPHWKQYKDDEGYINN 205 >08_02_1079 + 24190453-24190483,24191201-24191475,24191619-24191977, 24192066-24192306,24192391-24192603,24192677-24192769, 24192872-24192973,24194104-24194481 Length = 563 Score = 25.4 bits (53), Expect = 9.4 Identities = 7/18 (38%), Positives = 15/18 (83%) Frame = -1 Query: 207 HIFIFYEQFLDNQGHLNN 154 H+F ++Q+ D++G++NN Sbjct: 279 HVFPHWKQYKDDEGYINN 296 >05_05_0298 - 23926266-23926442,23926573-23926632,23926822-23927029, 23927471-23927703,23928806-23928860,23928943-23929649 Length = 479 Score = 25.4 bits (53), Expect = 9.4 Identities = 10/30 (33%), Positives = 16/30 (53%) Frame = +2 Query: 101 CSPIYFCRQITNSKIILRLLRCPWLSKNCS 190 C P + + IL+LLR PW+ +C+ Sbjct: 237 CPPFHAATNREKQQRILQLLRHPWVIGDCA 266 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 7,461,714 Number of Sequences: 37544 Number of extensions: 122636 Number of successful extensions: 266 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 260 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 266 length of database: 14,793,348 effective HSP length: 72 effective length of database: 12,090,180 effective search space used: 386885760 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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