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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10i06
         (315 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0453 - 17886095-17886868,17887928-17888043,17888300-178884...    28   1.8  
06_03_0288 - 19179619-19179714,19180209-19180300,19180408-191804...    27   3.1  
04_03_0776 - 19463473-19464252,19464354-19464849,19465460-19465911     27   3.1  
05_05_0268 + 23720837-23720914,23722398-23722486,23722669-237228...    27   4.1  
03_05_0472 - 24655384-24655764,24655904-24656119,24656197-246563...    26   5.4  
11_06_0267 + 21795762-21796190                                         26   7.1  
11_07_0005 + 27237673-27237885,27238030-27238195,27238439-272386...    25   9.4  
09_02_0276 - 6633919-6634296,6635432-6635533,6635636-6635728,663...    25   9.4  
08_02_1079 + 24190453-24190483,24191201-24191475,24191619-241919...    25   9.4  
05_05_0298 - 23926266-23926442,23926573-23926632,23926822-239270...    25   9.4  

>11_04_0453 -
           17886095-17886868,17887928-17888043,17888300-17888423,
           17889734-17889963,17891395-17891452
          Length = 433

 Score = 27.9 bits (59), Expect = 1.8
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 98  LCSPIYFCRQITNSKIILRLLRCP 169
           L S +YFC+++TNS +I     CP
Sbjct: 228 LQSVLYFCQRMTNSALITVAKNCP 251


>06_03_0288 -
           19179619-19179714,19180209-19180300,19180408-19180494,
           19180802-19180963,19181032-19181183,19181526-19181872
          Length = 311

 Score = 27.1 bits (57), Expect = 3.1
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = -1

Query: 228 NVFSQNFHIFIFYEQFL 178
           NVFS +F +++FY+ FL
Sbjct: 155 NVFSPSFRLYLFYQTFL 171


>04_03_0776 - 19463473-19464252,19464354-19464849,19465460-19465911
          Length = 575

 Score = 27.1 bits (57), Expect = 3.1
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 98  LCSPIYFCRQITNSKIILRLLRCP 169
           L S +YFC Q+TN+ ++     CP
Sbjct: 369 LNSLLYFCHQMTNAALVTVAKNCP 392


>05_05_0268 +
           23720837-23720914,23722398-23722486,23722669-23722807,
           23722899-23722973,23723069-23723190,23723287-23723362,
           23723786-23723845,23723939-23724091
          Length = 263

 Score = 26.6 bits (56), Expect = 4.1
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -2

Query: 272 EITIRCYRAYNGYN*MFSLK 213
           E++ RCY+ YNG N +  L+
Sbjct: 33  EVSSRCYKGYNGLNELHKLE 52


>03_05_0472 -
           24655384-24655764,24655904-24656119,24656197-24656321,
           24656432-24656621,24656817-24656911,24657230-24657454,
           24657940-24658003
          Length = 431

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +3

Query: 78  WLGCSNVFVLLYISVA 125
           WLG S VF L+YI +A
Sbjct: 169 WLGLSTVFSLIYIMIA 184


>11_06_0267 + 21795762-21796190
          Length = 142

 Score = 25.8 bits (54), Expect = 7.1
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +3

Query: 153 GY*DVPGYLKIVHKI*KCESFERKHSVVSIVSSITAY 263
           GY    G++ IVH+  K  +F++    VS  + +TA+
Sbjct: 49  GYNRANGFMWIVHRKKKEHTFKKIKQTVSYATEVTAF 85


>11_07_0005 +
           27237673-27237885,27238030-27238195,27238439-27238692,
           27238777-27238989,27239063-27239155,27239258-27239359,
           27240495-27240872
          Length = 472

 Score = 25.4 bits (53), Expect = 9.4
 Identities = 7/18 (38%), Positives = 15/18 (83%)
 Frame = -1

Query: 207 HIFIFYEQFLDNQGHLNN 154
           H+F  ++Q+ D++G++NN
Sbjct: 188 HVFPHWKQYKDDEGYINN 205


>09_02_0276 -
           6633919-6634296,6635432-6635533,6635636-6635728,
           6635802-6636014,6636099-6636352,6636596-6636761,
           6636906-6637118
          Length = 472

 Score = 25.4 bits (53), Expect = 9.4
 Identities = 7/18 (38%), Positives = 15/18 (83%)
 Frame = -1

Query: 207 HIFIFYEQFLDNQGHLNN 154
           H+F  ++Q+ D++G++NN
Sbjct: 188 HVFPHWKQYKDDEGYINN 205


>08_02_1079 +
           24190453-24190483,24191201-24191475,24191619-24191977,
           24192066-24192306,24192391-24192603,24192677-24192769,
           24192872-24192973,24194104-24194481
          Length = 563

 Score = 25.4 bits (53), Expect = 9.4
 Identities = 7/18 (38%), Positives = 15/18 (83%)
 Frame = -1

Query: 207 HIFIFYEQFLDNQGHLNN 154
           H+F  ++Q+ D++G++NN
Sbjct: 279 HVFPHWKQYKDDEGYINN 296


>05_05_0298 -
           23926266-23926442,23926573-23926632,23926822-23927029,
           23927471-23927703,23928806-23928860,23928943-23929649
          Length = 479

 Score = 25.4 bits (53), Expect = 9.4
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 101 CSPIYFCRQITNSKIILRLLRCPWLSKNCS 190
           C P +        + IL+LLR PW+  +C+
Sbjct: 237 CPPFHAATNREKQQRILQLLRHPWVIGDCA 266


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,461,714
Number of Sequences: 37544
Number of extensions: 122636
Number of successful extensions: 266
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 266
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 386885760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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