Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10i06
         (315 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40028-10|AAA81121.3|  363|Caenorhabditis elegans Serpentine rec...    30   0.40 
Z81594-6|CAJ85771.1|  153|Caenorhabditis elegans Hypothetical pr...    28   1.6  
Z81594-5|CAJ85770.1|  262|Caenorhabditis elegans Hypothetical pr...    28   1.6  
Z81594-4|CAB04747.1|  282|Caenorhabditis elegans Hypothetical pr...    28   1.6  
Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical pr...    27   3.8  
U10401-1|AAA19058.1|  131|Caenorhabditis elegans Hypothetical pr...    27   3.8  
AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical ...    27   3.8  
Z72507-11|CAA96628.2|  123|Caenorhabditis elegans Hypothetical p...    26   5.0  
Z69794-2|CAA93681.1|  786|Caenorhabditis elegans Hypothetical pr...    26   5.0  
Z77663-6|CAB01207.1|  360|Caenorhabditis elegans Hypothetical pr...    26   6.6  
AF100305-1|AAC68918.1|  197|Caenorhabditis elegans Hypothetical ...    25   8.7  
AF016685-8|AAG24150.1|  340|Caenorhabditis elegans Seven tm rece...    25   8.7  

>U40028-10|AAA81121.3|  363|Caenorhabditis elegans Serpentine
           receptor, class e (epsilon)protein 40 protein.
          Length = 363

 Score = 29.9 bits (64), Expect = 0.40
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
 Frame = -1

Query: 237 IQLNVFSQNFHIFIFYEQFLDNQGHLNNLRIILLFV----IWRQKYIGEQRH 94
           +Q   F Q + IF++Y     N G  N + I+ L V    +WR+K+ G  RH
Sbjct: 277 LQYYNFFQEYEIFLYYAIDWVNAG--NTVAIVPLTVALEPVWRRKFFGNIRH 326


>Z81594-6|CAJ85771.1|  153|Caenorhabditis elegans Hypothetical
           protein T20F10.2c protein.
          Length = 153

 Score = 27.9 bits (59), Expect = 1.6
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
 Frame = -1

Query: 267 NNTLL*SLQWIQ---LNVFSQNFHIFIFYEQFLDNQGHLNNL 151
           NNT L SL   Q   +N  +Q   I  F ++ L N  HLNNL
Sbjct: 18  NNTALNSLVSTQAQLINQLNQTIGIIQFEKEELKNAAHLNNL 59


>Z81594-5|CAJ85770.1|  262|Caenorhabditis elegans Hypothetical
           protein T20F10.2b protein.
          Length = 262

 Score = 27.9 bits (59), Expect = 1.6
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
 Frame = -1

Query: 267 NNTLL*SLQWIQ---LNVFSQNFHIFIFYEQFLDNQGHLNNL 151
           NNT L SL   Q   +N  +Q   I  F ++ L N  HLNNL
Sbjct: 127 NNTALNSLVSTQAQLINQLNQTIGIIQFEKEELKNAAHLNNL 168


>Z81594-4|CAB04747.1|  282|Caenorhabditis elegans Hypothetical
           protein T20F10.2a protein.
          Length = 282

 Score = 27.9 bits (59), Expect = 1.6
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
 Frame = -1

Query: 267 NNTLL*SLQWIQ---LNVFSQNFHIFIFYEQFLDNQGHLNNL 151
           NNT L SL   Q   +N  +Q   I  F ++ L N  HLNNL
Sbjct: 147 NNTALNSLVSTQAQLINQLNQTIGIIQFEKEELKNAAHLNNL 188


>Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical protein
            F40E10.4 protein.
          Length = 1410

 Score = 26.6 bits (56), Expect = 3.8
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -2

Query: 302  GECFLLQYSSEITIRCYRAYNG 237
            GEC   Q SS+ T +C+  ++G
Sbjct: 1084 GECVASQNSSDFTCKCHEGFSG 1105


>U10401-1|AAA19058.1|  131|Caenorhabditis elegans Hypothetical
           protein T20B12.5 protein.
          Length = 131

 Score = 26.6 bits (56), Expect = 3.8
 Identities = 17/60 (28%), Positives = 25/60 (41%)
 Frame = -2

Query: 314 FFFNGECFLLQYSSEITIRCYRAYNGYN*MFSLKTFTFSYFMNNF*ITRDILITLELSCY 135
           FF+N     LQ+   I    + A N +N        TF Y+ N   +   IL  L +S +
Sbjct: 68  FFYNSR--FLQFKVSIRCPLFHAQNIFNSKLEKYECTFKYYSNPLLVNVIILFGLRISVW 125


>AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical
            protein F40E10.4 protein.
          Length = 1410

 Score = 26.6 bits (56), Expect = 3.8
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -2

Query: 302  GECFLLQYSSEITIRCYRAYNG 237
            GEC   Q SS+ T +C+  ++G
Sbjct: 1084 GECVASQNSSDFTCKCHEGFSG 1105


>Z72507-11|CAA96628.2|  123|Caenorhabditis elegans Hypothetical
           protein F17C11.6 protein.
          Length = 123

 Score = 26.2 bits (55), Expect = 5.0
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +1

Query: 181 KLFIKYENVKVLRENIQLYPL*A-L*QRIVISLEY 282
           KLF  YE+ KVLR  I L  + + L   +++SL Y
Sbjct: 73  KLFSSYESFKVLRRGIVLLSMSSTLASSLIMSLNY 107


>Z69794-2|CAA93681.1|  786|Caenorhabditis elegans Hypothetical
           protein R03G8.4 protein.
          Length = 786

 Score = 26.2 bits (55), Expect = 5.0
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
 Frame = +1

Query: 49  TSKLTTMCWL--GWAVAMSLFSYIFLSPNH 132
           T K     WL  G+A  M+ + Y FL PN+
Sbjct: 343 TMKFWDQLWLNEGFATYMTAYGYTFLDPNY 372


>Z77663-6|CAB01207.1|  360|Caenorhabditis elegans Hypothetical
           protein F53F4.7 protein.
          Length = 360

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +1

Query: 157 IKMSLVI*KLFIKYENVKVLREN 225
           I +SL+   ++  Y+N+KVLR+N
Sbjct: 14  IPLSLIFNNIYQNYKNLKVLRKN 36


>AF100305-1|AAC68918.1|  197|Caenorhabditis elegans Hypothetical
          protein W04B5.4 protein.
          Length = 197

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -3

Query: 91 LQPNQANTLWLAWM 50
          ++P QA+ LW+AW+
Sbjct: 51 MRPKQASKLWMAWL 64


>AF016685-8|AAG24150.1|  340|Caenorhabditis elegans Seven tm
           receptor protein 85 protein.
          Length = 340

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -2

Query: 311 FFNGECFLLQYSSEITIRCYRAYNGY 234
           FFN  C ++ +S+E +   +  Y GY
Sbjct: 54  FFNKICGMMAHSTETSFVVFNVYQGY 79


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,152,027
Number of Sequences: 27780
Number of extensions: 134195
Number of successful extensions: 374
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 374
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 355337994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)