Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10i02
(701 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 321 2e-88
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 319 1e-87
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 318 3e-87
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 99 1e-21
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 96 2e-20
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 91 5e-19
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 91 9e-19
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 89 3e-18
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 89 3e-18
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 89 3e-18
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 85 3e-17
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 85 6e-17
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 84 1e-16
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 84 1e-16
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 83 2e-16
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 82 3e-16
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 81 9e-16
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 79 3e-15
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 78 5e-15
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 78 7e-15
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 78 7e-15
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 75 5e-14
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 75 5e-14
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 72 3e-13
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 72 3e-13
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 71 1e-12
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 70 1e-12
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 70 1e-12
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 69 3e-12
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 69 3e-12
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 69 3e-12
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 69 3e-12
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 69 4e-12
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 69 4e-12
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 68 7e-12
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 66 2e-11
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 66 2e-11
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 66 2e-11
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 66 2e-11
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 66 2e-11
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 66 2e-11
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 66 2e-11
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 64 9e-11
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 64 9e-11
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 64 9e-11
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 64 1e-10
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 63 2e-10
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 62 3e-10
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 62 3e-10
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 62 5e-10
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 62 5e-10
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 62 5e-10
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 62 5e-10
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 62 5e-10
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 61 8e-10
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 61 8e-10
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 61 8e-10
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 60 1e-09
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 60 1e-09
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 60 2e-09
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 58 6e-09
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 57 1e-08
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 56 2e-08
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 56 3e-08
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 56 3e-08
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 56 3e-08
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 55 4e-08
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 55 4e-08
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 55 5e-08
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 55 5e-08
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 55 5e-08
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 55 5e-08
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 55 5e-08
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 55 5e-08
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 54 7e-08
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 54 7e-08
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 54 9e-08
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 54 1e-07
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 54 1e-07
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 54 1e-07
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 53 2e-07
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 53 2e-07
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 52 3e-07
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 52 3e-07
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 52 4e-07
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 52 4e-07
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 52 4e-07
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 52 5e-07
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 52 5e-07
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 52 5e-07
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 52 5e-07
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 52 5e-07
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 51 6e-07
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 51 6e-07
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 51 6e-07
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 51 9e-07
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 51 9e-07
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 51 9e-07
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 51 9e-07
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 49 3e-06
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 49 3e-06
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 49 3e-06
At1g15850.1 68414.m01902 transducin family protein / WD-40 repea... 49 3e-06
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 49 3e-06
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 49 3e-06
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 48 5e-06
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 48 5e-06
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 48 5e-06
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 48 5e-06
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 48 6e-06
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 48 6e-06
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 48 8e-06
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 48 8e-06
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 48 8e-06
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 47 1e-05
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 47 1e-05
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 47 1e-05
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 47 1e-05
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 47 1e-05
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 47 1e-05
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 47 1e-05
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 47 1e-05
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 46 2e-05
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 46 2e-05
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 46 2e-05
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 46 3e-05
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 45 4e-05
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 45 4e-05
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 45 6e-05
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 45 6e-05
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 45 6e-05
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 44 7e-05
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 44 1e-04
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 44 1e-04
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 44 1e-04
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 44 1e-04
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 44 1e-04
At5g43930.1 68418.m05374 transducin family protein / WD-40 repea... 44 1e-04
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 44 1e-04
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 44 1e-04
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 43 2e-04
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 43 2e-04
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 43 2e-04
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 43 2e-04
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 43 2e-04
At2g47790.1 68415.m05965 transducin family protein / WD-40 repea... 43 2e-04
At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 43 2e-04
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 43 2e-04
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 43 2e-04
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 42 3e-04
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 42 5e-04
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 41 7e-04
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 41 7e-04
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 41 7e-04
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 41 0.001
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 41 0.001
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 41 0.001
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 41 0.001
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 41 0.001
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 40 0.001
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 40 0.002
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 40 0.002
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 40 0.002
At1g69400.2 68414.m07968 transducin family protein / WD-40 repea... 40 0.002
At1g69400.1 68414.m07969 transducin family protein / WD-40 repea... 40 0.002
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 40 0.002
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 39 0.003
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 39 0.004
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 39 0.004
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 39 0.004
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 39 0.004
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 38 0.005
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 38 0.005
At5g52250.1 68418.m06485 transducin family protein / WD-40 repea... 38 0.006
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 38 0.006
At1g80710.1 68414.m09470 transducin family protein / WD-40 repea... 38 0.006
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 38 0.009
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 38 0.009
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 37 0.011
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 37 0.011
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 37 0.011
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 36 0.020
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 36 0.020
At2g25420.1 68415.m03045 transducin family protein / WD-40 repea... 36 0.026
At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p pro... 36 0.034
At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p pro... 36 0.034
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 36 0.034
At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-rel... 35 0.045
At1g03110.1 68414.m00288 transducin family protein / WD-40 repea... 35 0.045
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 35 0.060
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 35 0.060
At5g45760.2 68418.m05626 transducin family protein / WD-40 repea... 35 0.060
At5g45760.1 68418.m05625 transducin family protein / WD-40 repea... 35 0.060
At1g27470.1 68414.m03349 transducin-related / WD-40 repeat prote... 35 0.060
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 34 0.079
At3g13300.2 68416.m01675 transducin family protein / WD-40 repea... 34 0.079
At3g13300.1 68416.m01674 transducin family protein / WD-40 repea... 34 0.079
At5g23730.1 68418.m02782 transducin family protein / WD-40 repea... 34 0.10
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 34 0.10
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 34 0.10
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 34 0.10
At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 33 0.14
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 33 0.18
At1g76260.1 68414.m08855 transducin family protein / WD-40 repea... 33 0.18
At1g20540.1 68414.m02559 transducin family protein / WD-40 repea... 33 0.18
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 33 0.18
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 33 0.24
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 33 0.24
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 33 0.24
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 33 0.24
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 32 0.32
At4g34280.1 68417.m04873 transducin family protein / WD-40 repea... 32 0.42
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 31 0.56
At5g58760.1 68418.m07360 transducin family protein / WD-40 repea... 31 0.74
At4g11270.1 68417.m01823 transducin family protein / WD-40 repea... 31 0.74
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 31 0.74
At1g17720.2 68414.m02194 serine/threonine protein phosphatase 2A... 31 0.74
At1g17720.1 68414.m02193 serine/threonine protein phosphatase 2A... 31 0.74
At3g26640.1 68416.m03329 transducin family protein / WD-40 repea... 31 0.98
At3g13290.1 68416.m01673 transducin family protein / WD-40 repea... 30 1.3
At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4 ... 30 1.7
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 30 1.7
At5g17370.1 68418.m02036 WD-40 repeat family protein contains 1 ... 29 2.3
At5g04560.1 68418.m00456 DEMETER protein (DME) identical to DEME... 29 2.3
At4g21520.1 68417.m03110 transducin family protein / WD-40 repea... 29 2.3
At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-rel... 29 2.3
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 29 3.0
At5g12920.1 68418.m01482 expressed protein contains 3 weak WD-40... 29 3.9
At1g65030.1 68414.m07371 transducin family protein / WD-40 repea... 29 3.9
At5g60050.1 68418.m07530 PRLI-interacting factor-related contain... 28 5.2
At5g59120.1 68418.m07409 subtilase family protein contains simil... 28 6.9
At5g01290.1 68418.m00039 mRNA capping enzyme family protein simi... 28 6.9
At2g19540.1 68415.m02283 transducin family protein / WD-40 repea... 28 6.9
At4g03970.1 68417.m00561 Ulp1 protease family protein contains P... 27 9.1
At3g02260.1 68416.m00207 auxin transport protein (BIG) nearly id... 27 9.1
At2g35510.1 68415.m04349 WWE domain-containing protein contains ... 27 9.1
At1g71310.3 68414.m08231 expressed protein 27 9.1
At1g71310.2 68414.m08230 expressed protein 27 9.1
At1g71310.1 68414.m08229 expressed protein 27 9.1
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 321 bits (789), Expect = 2e-88
Identities = 147/212 (69%), Positives = 173/212 (81%), Gaps = 1/212 (0%)
Frame = +2
Query: 68 MSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY 247
M+E L L+G +R H VT IAT D+I+++SRDK++I+WKLT+D+ +YG+ Q+RL
Sbjct: 1 MAEGLVLKGIMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLT 60
Query: 248 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 427
GHSHF+ DVVLSSDG +ALSGSWD LRLWDLA G+TTRRF HTKDVLSVAFS DNRQI
Sbjct: 61 GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQI 120
Query: 428 VSGSRDKTIKLWNTLAECKYTIQD-DGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 604
VS SRD+TIKLWNTL ECKYTI + DGH +WVSCVRFSPN P IVS WD+TVKVW+L
Sbjct: 121 VSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL 180
Query: 605 TNCKLKINHLGHSGYLNTVTVSPDGSLCASGG 700
NCKL+ + +GHSGYLNTV VSPDGSLCASGG
Sbjct: 181 QNCKLRNSLVGHSGYLNTVAVSPDGSLCASGG 212
Score = 61.3 bits (142), Expect = 6e-10
Identities = 47/151 (31%), Positives = 75/151 (49%), Gaps = 2/151 (1%)
Frame = +2
Query: 158 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYA--LSGSWDKTLR 331
I+S+SRD+T+ +W T E Y I + GH ++S V S + +S SWDKT++
Sbjct: 120 IVSASRDRTIKLWN-TLGECKYTISEGD--GHKEWVSCVRFSPNTLVPTIVSASWDKTVK 176
Query: 332 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHS 511
+W+L K H+ + +VA S D SG +D I LW+ LAE K + S
Sbjct: 177 VWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWD-LAEGKKLYSLEAGS 235
Query: 512 DWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 604
+ + FSPN + + ++++W L
Sbjct: 236 -IIHSLCFSPNR---YWLCAATENSIRIWDL 262
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 319 bits (784), Expect = 1e-87
Identities = 146/213 (68%), Positives = 173/213 (81%), Gaps = 2/213 (0%)
Frame = +2
Query: 68 MSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY 247
M+E L L+GT+R H VT IAT D+I+S+SRDK++I+WKLT+D+ YG+ Q+RL
Sbjct: 1 MAEGLVLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLT 60
Query: 248 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 427
GHSHF+ DVVLSSDG +ALSGSWD LRLWDLAAG +TRRF HTKDVLSVAFS+DNRQI
Sbjct: 61 GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQI 120
Query: 428 VSGSRDKTIKLWNTLAECKYTIQD--DGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 601
VS SRD+TIKLWNTL ECKYTI + +GH DWVSCVRFSPN P IVS WD+TVKVW+
Sbjct: 121 VSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWN 180
Query: 602 LTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG 700
L+NCKL+ GH+GY++TV VSPDGSLCASGG
Sbjct: 181 LSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGG 213
Score = 65.7 bits (153), Expect = 3e-11
Identities = 49/151 (32%), Positives = 76/151 (50%), Gaps = 2/151 (1%)
Frame = +2
Query: 158 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYA--LSGSWDKTLR 331
I+S+SRD+T+ +W T E Y I + GH ++S V S + +S SWDKT++
Sbjct: 120 IVSASRDRTIKLWN-TLGECKYTISEGG-EGHRDWVSCVRFSPNTLQPTIVSASWDKTVK 177
Query: 332 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHS 511
+W+L+ K HT V +VA S D SG +D + LW+ LAE K + +S
Sbjct: 178 VWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWD-LAEGKKLYSLEANS 236
Query: 512 DWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 604
+ + FSPN + + +K+W L
Sbjct: 237 -VIHALCFSPNR---YWLCAATEHGIKIWDL 263
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 318 bits (780), Expect = 3e-87
Identities = 145/212 (68%), Positives = 171/212 (80%), Gaps = 1/212 (0%)
Frame = +2
Query: 68 MSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY 247
M+E L L+GT+ H VT IAT D+I++SSRDK++I+WKLT+++ +YG+ Q+R+
Sbjct: 1 MAEGLVLKGTMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMT 60
Query: 248 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 427
GHSHF+ DVVLSSDG +ALSGSWD LRLWDLA G++TRRF HTKDVLSVAFS DNRQI
Sbjct: 61 GHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQI 120
Query: 428 VSGSRDKTIKLWNTLAECKYTIQD-DGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 604
VS SRD+TIKLWNTL ECKYTI + DGH +WVSCVRFSPN P IVS WD+TVKVW+L
Sbjct: 121 VSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL 180
Query: 605 TNCKLKINHLGHSGYLNTVTVSPDGSLCASGG 700
NCKL+ GHSGYLNTV VSPDGSLCASGG
Sbjct: 181 QNCKLRNTLAGHSGYLNTVAVSPDGSLCASGG 212
Score = 62.1 bits (144), Expect = 3e-10
Identities = 47/151 (31%), Positives = 75/151 (49%), Gaps = 2/151 (1%)
Frame = +2
Query: 158 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYA--LSGSWDKTLR 331
I+S+SRD+T+ +W T E Y I + GH ++S V S + +S SWDKT++
Sbjct: 120 IVSASRDRTIKLWN-TLGECKYTISEAD--GHKEWVSCVRFSPNTLVPTIVSASWDKTVK 176
Query: 332 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHS 511
+W+L K H+ + +VA S D SG +D I LW+ LAE K + S
Sbjct: 177 VWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWD-LAEGKKLYSLEAGS 235
Query: 512 DWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 604
+ + FSPN + + ++++W L
Sbjct: 236 -IIHSLCFSPNR---YWLCAATENSIRIWDL 262
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 99 bits (238), Expect = 1e-21
Identities = 55/151 (36%), Positives = 86/151 (56%), Gaps = 1/151 (0%)
Frame = +2
Query: 149 PDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTL 328
P+ ++S S D T+ +W+ + + P+KRL GH ++ V S DG + S S+DK++
Sbjct: 329 PERLVSGSDDFTMFLWEPSVSKQ----PKKRLTGHQQLVNHVYFSPDGKWIASASFDKSV 384
Query: 329 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD-DG 505
RLW+ G+ F H V V++S D+R ++SGS+D T+K+W K QD G
Sbjct: 385 RLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWE--IRTKKLKQDLPG 442
Query: 506 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 598
H+D V V +SP+ +VS G DR +K+W
Sbjct: 443 HADEVFAVDWSPDGEK--VVSGGKDRVLKLW 471
Score = 72.5 bits (170), Expect = 2e-13
Identities = 65/215 (30%), Positives = 103/215 (47%), Gaps = 3/215 (1%)
Frame = +2
Query: 65 KMSETL--KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQK 238
KM ET KL L+GH W+ +A + +Y ++ + + D T + ++ QK
Sbjct: 265 KMWETTQGKLIRELKGHGHWINSLALSTEY--VLRTGAFDHTGRQYPPNEEK------QK 316
Query: 239 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVD 415
L ++ D +SGS D T+ LW+ + K + R H + V V FS D
Sbjct: 317 ALERYNKTKGD-----SPERLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPD 371
Query: 416 NRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKV 595
+ I S S DK+++LWN + T+ GH V V +S + + +++S D T+K+
Sbjct: 372 GKWIASASFDKSVRLWNGITGQFVTVFR-GHVGPVYQVSWSAD--SRLLLSGSKDSTLKI 428
Query: 596 WHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG 700
W + KLK + GH+ + V SPDG SGG
Sbjct: 429 WEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGG 463
Score = 71.3 bits (167), Expect = 6e-13
Identities = 47/147 (31%), Positives = 68/147 (46%), Gaps = 3/147 (2%)
Frame = +2
Query: 248 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 427
GH+ + V S DG SGS D T+RLWDL + H VL+VA+S D + +
Sbjct: 107 GHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHL 166
Query: 428 VSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNH-ANPI--IVSCGWDRTVKVW 598
VSGS+ I WN GH W++ + + P H ++P V+ D ++W
Sbjct: 167 VSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIW 226
Query: 599 HLTNCKLKINHLGHSGYLNTVTVSPDG 679
+T K I GH+ + V DG
Sbjct: 227 DITLKKSIICLSGHTLAVTCVKWGGDG 253
Score = 60.5 bits (140), Expect = 1e-09
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 6/200 (3%)
Frame = +2
Query: 95 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 274
T+ GH V ++ +P + S S D T+ +W L + P GH +++ V
Sbjct: 104 TIAGHAEAVLCVSFSPD-GKQLASGSGDTTVRLWDLYTET-----PLFTCKGHKNWVLTV 157
Query: 275 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRR-FEDHTKDVLSVAF-----SVDNRQIVSG 436
S DG + +SGS + W+ G+ H K + +++ S R+ V+
Sbjct: 158 AWSPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTS 217
Query: 437 SRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCK 616
S+D ++W+ + K I GH+ V+CV++ + II + D T+K+W T K
Sbjct: 218 SKDGDARIWDITLK-KSIICLSGHTLAVTCVKWG---GDGIIYTGSQDCTIKMWETTQGK 273
Query: 617 LKINHLGHSGYLNTVTVSPD 676
L GH ++N++ +S +
Sbjct: 274 LIRELKGHGHWINSLALSTE 293
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/73 (36%), Positives = 35/73 (47%)
Frame = +2
Query: 479 CKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNT 658
C TI GH++ V CV FSP+ + S D TV++W L GH ++ T
Sbjct: 101 CSQTIA--GHAEAVLCVSFSPDGKQ--LASGSGDTTVRLWDLYTETPLFTCKGHKNWVLT 156
Query: 659 VTVSPDGSLCASG 697
V SPDG SG
Sbjct: 157 VAWSPDGKHLVSG 169
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 96.3 bits (229), Expect = 2e-20
Identities = 56/169 (33%), Positives = 87/169 (51%), Gaps = 1/169 (0%)
Frame = +2
Query: 95 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 274
TL HN V+ + + ++ S+S DKT+ + + + P + GH + ISDV
Sbjct: 19 TLTSHNRAVSSVKFSSD-GRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDV 77
Query: 275 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 454
SSD + +S S DKTL+LWD+ G + HT V F+ + IVSGS D+T+
Sbjct: 78 AFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETV 137
Query: 455 KLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 598
++W+ T +C + HSD V+ V F N +IVS +D ++W
Sbjct: 138 RIWDVTTGKCLKVL--PAHSDPVTAVDF--NRDGSLIVSSSYDGLCRIW 182
Score = 93.5 bits (222), Expect = 1e-19
Identities = 58/180 (32%), Positives = 95/180 (52%), Gaps = 1/180 (0%)
Frame = +2
Query: 104 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 283
GH ++ +A + I+S+S DKTL +W + G K L GH+++ V +
Sbjct: 69 GHENGISDVAFSSD-ARFIVSASDDKTLKLWDVET-----GSLIKTLIGHTNYAFCVNFN 122
Query: 284 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 463
N +SGS+D+T+R+WD+ GK + H+ V +V F+ D IVS S D ++W
Sbjct: 123 PQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIW 182
Query: 464 NT-LAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGH 640
++ C T+ DD + VS VRFSPN I+ D T+++W++++ K + GH
Sbjct: 183 DSGTGHCVKTLIDDENPP-VSFVRFSPN--GKFILVGTLDNTLRLWNISSAKFLKTYTGH 239
Score = 89.4 bits (212), Expect = 2e-18
Identities = 66/210 (31%), Positives = 102/210 (48%), Gaps = 2/210 (0%)
Frame = +2
Query: 74 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 253
ET L TL GH + + NP+ +MI+S S D+T+ +W +T G K L H
Sbjct: 101 ETGSLIKTLIGHTNYAFCVNFNPQ-SNMIVSGSFDETVRIWDVTT-----GKCLKVLPAH 154
Query: 254 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF-EDHTKDVLSVAFSVDNRQIV 430
S ++ V + DG+ +S S+D R+WD G + +D V V FS + + I+
Sbjct: 155 SDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFIL 214
Query: 431 SGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHAN-PIIVSCGWDRTVKVWHLT 607
G+ D T++LWN ++ K+ GH + C+ + + N IVS D V +W L
Sbjct: 215 VGTLDNTLRLWN-ISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELN 273
Query: 608 NCKLKINHLGHSGYLNTVTVSPDGSLCASG 697
+ KL GH+ + V P +L ASG
Sbjct: 274 SKKLLQKLEGHTETVMNVACHPTENLIASG 303
Score = 86.2 bits (204), Expect = 2e-17
Identities = 57/162 (35%), Positives = 82/162 (50%), Gaps = 6/162 (3%)
Frame = +2
Query: 227 IPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAA-----GKTTRRFEDHTKDV 391
+ + L H+ +S V SSDG S S DKT+R + + + + F H +
Sbjct: 15 VHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGI 74
Query: 392 LSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD-DGHSDWVSCVRFSPNHANPIIVS 568
VAFS D R IVS S DKT+KLW+ E I+ GH+++ CV F+P + +IVS
Sbjct: 75 SDVAFSSDARFIVSASDDKTLKLWDV--ETGSLIKTLIGHTNYAFCVNFNPQ--SNMIVS 130
Query: 569 CGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCAS 694
+D TV++W +T K HS + V + DGSL S
Sbjct: 131 GSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVS 172
Score = 58.0 bits (134), Expect = 6e-09
Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Frame = +2
Query: 377 HTKDVLSVAFSVDNRQIVSGSRDKTIKLW--NTLAE-CKYTIQD-DGHSDWVSCVRFSPN 544
H + V SV FS D R + S S DKTI+ + NT+ + +Q+ GH + +S V FS +
Sbjct: 23 HNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSD 82
Query: 545 HANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASG 697
IVS D+T+K+W + L +GH+ Y V +P ++ SG
Sbjct: 83 AR--FIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSG 131
Score = 56.0 bits (129), Expect = 2e-08
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Frame = +2
Query: 158 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH---SHFISDVVLSSDGNYALSGSWDKTL 328
IL + D TL +W ++ + K GH + IS ++G +SGS D +
Sbjct: 213 ILVGTLDNTLRLWNISSAKF-----LKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCV 267
Query: 329 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 478
+W+L + K ++ E HT+ V++VA I SGS DKT+++W E
Sbjct: 268 HMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIWTQKKE 317
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 91.5 bits (217), Expect = 5e-19
Identities = 53/155 (34%), Positives = 84/155 (54%), Gaps = 2/155 (1%)
Frame = +2
Query: 236 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 415
K L GH+ IS V S+DGN S S DKT+ LW R+E H+ + +A+S D
Sbjct: 37 KTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSD 96
Query: 416 NRQIVSGSRDKTIKLWNTLA--ECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTV 589
+ S S D T+++W+ + EC ++ GH+++V CV F+P + +IVS +D T+
Sbjct: 97 SHYTCSASDDCTLRIWDARSPYECLKVLR--GHTNFVFCVNFNP--PSNLIVSGSFDETI 152
Query: 590 KVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCAS 694
++W + K HS +++V + DGSL S
Sbjct: 153 RIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVS 187
Score = 88.6 bits (210), Expect = 3e-18
Identities = 61/170 (35%), Positives = 89/170 (52%), Gaps = 2/170 (1%)
Frame = +2
Query: 95 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 274
TL GH ++ + + +++ S+S DKT+I+W T NY + R GHS ISD+
Sbjct: 38 TLEGHTAAISCVKFSND-GNLLASASVDKTMILWSAT----NYSLIH-RYEGHSSGISDL 91
Query: 275 VLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKT 451
SSD +Y S S D TLR+WD + + + HT V V F+ + IVSGS D+T
Sbjct: 92 AWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDET 151
Query: 452 IKLWNT-LAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 598
I++W +C I+ HS +S V F N +IVS D + K+W
Sbjct: 152 IRIWEVKTGKCVRMIK--AHSMPISSVHF--NRDGSLIVSASHDGSCKIW 197
Score = 83.8 bits (198), Expect = 1e-16
Identities = 58/188 (30%), Positives = 94/188 (50%), Gaps = 1/188 (0%)
Frame = +2
Query: 104 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 283
GH+ ++ +A + S+S D TL +W D + K L GH++F+ V +
Sbjct: 83 GHSSGISDLAWSSD-SHYTCSASDDCTLRIW----DARSPYECLKVLRGHTNFVFCVNFN 137
Query: 284 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 463
N +SGS+D+T+R+W++ GK R + H+ + SV F+ D IVS S D + K+W
Sbjct: 138 PPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIW 197
Query: 464 NTL-AECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGH 640
+ C T+ DD S VS +FSPN I+ D T+K+ + K + GH
Sbjct: 198 DAKEGTCLKTLIDD-KSPAVSFAKFSPN--GKFILVATLDSTLKLSNYATGKFLKVYTGH 254
Query: 641 SGYLNTVT 664
+ + +T
Sbjct: 255 TNKVFCIT 262
Score = 58.0 bits (134), Expect = 6e-09
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 3/170 (1%)
Frame = +2
Query: 98 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 277
++ H+ ++ + N + +I+S+S D + +W D + + S +S
Sbjct: 166 IKAHSMPISSVHFN-RDGSLIVSASHDGSCKIW----DAKEGTCLKTLIDDKSPAVSFAK 220
Query: 278 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSV--AFSVDN-RQIVSGSRDK 448
S +G + L + D TL+L + A GK + + HT V + AFSV N + IVSGS D
Sbjct: 221 FSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDN 280
Query: 449 TIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 598
+ LW+ A + +GH+D V V P D+T+++W
Sbjct: 281 CVYLWDLQAR-NILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIRIW 329
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 90.6 bits (215), Expect = 9e-19
Identities = 65/202 (32%), Positives = 99/202 (49%), Gaps = 1/202 (0%)
Frame = +2
Query: 98 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 277
L GH V + NP +I S S D+ + +W++ D N+ + L GH + I D+
Sbjct: 49 LSGHPSAVYTMKFNPA-GTLIASGSHDREIFLWRVHGDCKNFMV----LKGHKNAILDLH 103
Query: 278 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ-IVSGSRDKTI 454
+SDG+ +S S DKT+R WD+ GK ++ +H+ V S + I+SGS D T
Sbjct: 104 WTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTA 163
Query: 455 KLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHL 634
KLW+ + IQ ++ V FS A I + G D VKVW L + +
Sbjct: 164 KLWD--MRQRGAIQTFPDKYQITAVSFS--DAADKIFTGGVDNDVKVWDLRKGEATMTLE 219
Query: 635 GHSGYLNTVTVSPDGSLCASGG 700
GH + +++SPDGS + G
Sbjct: 220 GHQDTITGMSLSPDGSYLLTNG 241
Score = 58.0 bits (134), Expect = 6e-09
Identities = 44/212 (20%), Positives = 84/212 (39%), Gaps = 5/212 (2%)
Frame = +2
Query: 74 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 253
ET K + H+ +V + P +I+S S D T +W + + P K
Sbjct: 126 ETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDK----- 180
Query: 254 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 433
+ I+ V S + +G D +++WDL G+ T E H + ++ S D +++
Sbjct: 181 -YQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLT 239
Query: 434 GSRDKTIKLWNTLA-----ECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 598
D + +W+ C + H+ + ++ S + + + DR V +W
Sbjct: 240 NGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIW 299
Query: 599 HLTNCKLKINHLGHSGYLNTVTVSPDGSLCAS 694
T+ + GH+G +N P + S
Sbjct: 300 DTTSRRTIYKLPGHTGSVNECVFHPTEPIIGS 331
Score = 51.2 bits (117), Expect = 6e-07
Identities = 37/127 (29%), Positives = 58/127 (45%), Gaps = 2/127 (1%)
Frame = +2
Query: 230 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAF 406
P L GH + + + G SGS D+ + LW + K + H +L + +
Sbjct: 45 PIMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHW 104
Query: 407 SVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWV-SCVRFSPNHANPIIVSCGWDR 583
+ D QIVS S DKT++ W+ + K + HS +V SC P+I+S D
Sbjct: 105 TSDGSQIVSASPDKTVRAWD-VETGKQIKKMAEHSSFVNSCC--PTRRGPPLIISGSDDG 161
Query: 584 TVKVWHL 604
T K+W +
Sbjct: 162 TAKLWDM 168
Score = 48.8 bits (111), Expect = 3e-06
Identities = 37/126 (29%), Positives = 53/126 (42%), Gaps = 4/126 (3%)
Frame = +2
Query: 95 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 274
TL GH +T ++ +P +L++ D L VW + R K GH H
Sbjct: 217 TLEGHQDTITGMSLSPD-GSYLLTNGMDNKLCVWDM-RPYAPQNRCVKIFEGHQHNFEKN 274
Query: 275 VL----SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 442
+L S DG +GS D+ + +WD + +T + HT V F I S S
Sbjct: 275 LLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSS 334
Query: 443 DKTIKL 460
DK I L
Sbjct: 335 DKNIYL 340
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 88.6 bits (210), Expect = 3e-18
Identities = 58/176 (32%), Positives = 92/176 (52%), Gaps = 4/176 (2%)
Frame = +2
Query: 107 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS- 283
H+ ++ +A +P P +LSSS D + +W EN + Q GHSH++ VV +
Sbjct: 98 HSDYIRCVAVHPTLP-YVLSSSDDMLIKLWDW---ENGWACTQI-FEGHSHYVMQVVFNP 152
Query: 284 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV--DNRQIVSGSRDKTIK 457
D N S S D+T+++W+L + + H K V V + D +++GS D T K
Sbjct: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAK 212
Query: 458 LWNTLAE-CKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLK 622
+W+ + C T+ DGH+ VS V F P PII++ D TV++WH T +L+
Sbjct: 213 VWDYQTKSCVQTL--DGHTHNVSAVCFHPEL--PIIITGSEDGTVRIWHATTYRLE 264
Score = 69.7 bits (163), Expect = 2e-12
Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 2/123 (1%)
Frame = +2
Query: 104 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFIS--DVV 277
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ L H ++ D
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF-----TLDAHQKGVNCVDYF 194
Query: 278 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 457
D Y ++GS D T ++WD + + HT +V +V F + I++GS D T++
Sbjct: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVR 254
Query: 458 LWN 466
+W+
Sbjct: 255 IWH 257
Score = 69.3 bits (162), Expect = 2e-12
Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 3/152 (1%)
Frame = +2
Query: 251 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFSV-DNRQ 424
HS +I V + Y LS S D ++LWD G T+ FE H+ V+ V F+ D
Sbjct: 98 HSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNT 157
Query: 425 IVSGSRDKTIKLWNTLA-ECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 601
S S D+TIK+WN + + +T+ D H V+CV + P +++ D T KVW
Sbjct: 158 FASASLDRTIKIWNLGSPDPNFTL--DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
Query: 602 LTNCKLKINHLGHSGYLNTVTVSPDGSLCASG 697
GH+ ++ V P+ + +G
Sbjct: 216 YQTKSCVQTLDGHTHNVSAVCFHPELPIIITG 247
Score = 48.4 bits (110), Expect = 5e-06
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 3/150 (2%)
Frame = +2
Query: 233 QKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 412
+++ S + V L + L+ + T+ +W+ T+ FE V S F
Sbjct: 8 KRKFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIP 67
Query: 413 DNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVK 592
+ +V+G+ D I+++N K + + HSD++ CV P P ++S D +K
Sbjct: 68 RKQWVVAGADDMYIRVYNYNTMDKVKVFE-AHSDYIRCVAVHP--TLPYVLSSSDDMLIK 124
Query: 593 VWHLTN---CKLKINHLGHSGYLNTVTVSP 673
+W N C GHS Y+ V +P
Sbjct: 125 LWDWENGWACTQIFE--GHSHYVMQVVFNP 152
Score = 35.1 bits (77), Expect = 0.045
Identities = 25/99 (25%), Positives = 44/99 (44%)
Frame = +2
Query: 158 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 337
+++ S D T VW D Q L GH+H +S V + ++GS D T+R+W
Sbjct: 202 LITGSDDHTAKVW----DYQTKSCVQT-LDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Query: 338 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 454
+ + V ++ + +R++V G + TI
Sbjct: 257 HATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTI 295
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 88.6 bits (210), Expect = 3e-18
Identities = 58/176 (32%), Positives = 92/176 (52%), Gaps = 4/176 (2%)
Frame = +2
Query: 107 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS- 283
H+ ++ +A +P P +LSSS D + +W EN + Q GHSH++ VV +
Sbjct: 98 HSDYIRCVAVHPTLP-YVLSSSDDMLIKLWDW---ENGWACTQI-FEGHSHYVMQVVFNP 152
Query: 284 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV--DNRQIVSGSRDKTIK 457
D N S S D+T+++W+L + + H K V V + D +++GS D T K
Sbjct: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAK 212
Query: 458 LWNTLAE-CKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLK 622
+W+ + C T+ DGH+ VS V F P PII++ D TV++WH T +L+
Sbjct: 213 VWDYQTKSCVQTL--DGHTHNVSAVCFHPEL--PIIITGSEDGTVRIWHATTYRLE 264
Score = 69.7 bits (163), Expect = 2e-12
Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 2/123 (1%)
Frame = +2
Query: 104 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFIS--DVV 277
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ L H ++ D
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF-----TLDAHQKGVNCVDYF 194
Query: 278 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 457
D Y ++GS D T ++WD + + HT +V +V F + I++GS D T++
Sbjct: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVR 254
Query: 458 LWN 466
+W+
Sbjct: 255 IWH 257
Score = 69.3 bits (162), Expect = 2e-12
Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 3/152 (1%)
Frame = +2
Query: 251 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFSV-DNRQ 424
HS +I V + Y LS S D ++LWD G T+ FE H+ V+ V F+ D
Sbjct: 98 HSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNT 157
Query: 425 IVSGSRDKTIKLWNTLA-ECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 601
S S D+TIK+WN + + +T+ D H V+CV + P +++ D T KVW
Sbjct: 158 FASASLDRTIKIWNLGSPDPNFTL--DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
Query: 602 LTNCKLKINHLGHSGYLNTVTVSPDGSLCASG 697
GH+ ++ V P+ + +G
Sbjct: 216 YQTKSCVQTLDGHTHNVSAVCFHPELPIIITG 247
Score = 48.4 bits (110), Expect = 5e-06
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 3/150 (2%)
Frame = +2
Query: 233 QKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 412
+++ S + V L + L+ + T+ +W+ T+ FE V S F
Sbjct: 8 KRKFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIP 67
Query: 413 DNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVK 592
+ +V+G+ D I+++N K + + HSD++ CV P P ++S D +K
Sbjct: 68 RKQWVVAGADDMYIRVYNYNTMDKVKVFE-AHSDYIRCVAVHP--TLPYVLSSSDDMLIK 124
Query: 593 VWHLTN---CKLKINHLGHSGYLNTVTVSP 673
+W N C GHS Y+ V +P
Sbjct: 125 LWDWENGWACTQIFE--GHSHYVMQVVFNP 152
Score = 35.1 bits (77), Expect = 0.045
Identities = 25/99 (25%), Positives = 44/99 (44%)
Frame = +2
Query: 158 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 337
+++ S D T VW D Q L GH+H +S V + ++GS D T+R+W
Sbjct: 202 LITGSDDHTAKVW----DYQTKSCVQT-LDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Query: 338 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 454
+ + V ++ + +R++V G + TI
Sbjct: 257 HATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTI 295
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 88.6 bits (210), Expect = 3e-18
Identities = 58/176 (32%), Positives = 92/176 (52%), Gaps = 4/176 (2%)
Frame = +2
Query: 107 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS- 283
H+ ++ +A +P P +LSSS D + +W EN + Q GHSH++ VV +
Sbjct: 98 HSDYIRCVAVHPTLP-YVLSSSDDMLIKLWDW---ENGWACTQI-FEGHSHYVMQVVFNP 152
Query: 284 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV--DNRQIVSGSRDKTIK 457
D N S S D+T+++W+L + + H K V V + D +++GS D T K
Sbjct: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAK 212
Query: 458 LWNTLAE-CKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLK 622
+W+ + C T+ DGH+ VS V F P PII++ D TV++WH T +L+
Sbjct: 213 VWDYQTKSCVQTL--DGHTHNVSAVCFHPEL--PIIITGSEDGTVRIWHATTYRLE 264
Score = 69.7 bits (163), Expect = 2e-12
Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 2/123 (1%)
Frame = +2
Query: 104 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFIS--DVV 277
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ L H ++ D
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF-----TLDAHQKGVNCVDYF 194
Query: 278 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 457
D Y ++GS D T ++WD + + HT +V +V F + I++GS D T++
Sbjct: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVR 254
Query: 458 LWN 466
+W+
Sbjct: 255 IWH 257
Score = 69.3 bits (162), Expect = 2e-12
Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 3/152 (1%)
Frame = +2
Query: 251 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFSV-DNRQ 424
HS +I V + Y LS S D ++LWD G T+ FE H+ V+ V F+ D
Sbjct: 98 HSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNT 157
Query: 425 IVSGSRDKTIKLWNTLA-ECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 601
S S D+TIK+WN + + +T+ D H V+CV + P +++ D T KVW
Sbjct: 158 FASASLDRTIKIWNLGSPDPNFTL--DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
Query: 602 LTNCKLKINHLGHSGYLNTVTVSPDGSLCASG 697
GH+ ++ V P+ + +G
Sbjct: 216 YQTKSCVQTLDGHTHNVSAVCFHPELPIIITG 247
Score = 48.4 bits (110), Expect = 5e-06
Identities = 37/150 (24%), Positives = 65/150 (43%), Gaps = 3/150 (2%)
Frame = +2
Query: 233 QKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 412
+++ S + V L + L+ + T+ +W+ T+ FE V S F
Sbjct: 8 KRKFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIP 67
Query: 413 DNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVK 592
+ +V+G+ D I+++N K + + HSD++ CV P P ++S D +K
Sbjct: 68 RKQWVVAGADDMYIRVYNYNTMDKVKVFE-AHSDYIRCVAVHP--TLPYVLSSSDDMLIK 124
Query: 593 VWHLTN---CKLKINHLGHSGYLNTVTVSP 673
+W N C GHS Y+ V +P
Sbjct: 125 LWDWENGWACTQIFE--GHSHYVMQVVFNP 152
Score = 35.1 bits (77), Expect = 0.045
Identities = 25/99 (25%), Positives = 44/99 (44%)
Frame = +2
Query: 158 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 337
+++ S D T VW D Q L GH+H +S V + ++GS D T+R+W
Sbjct: 202 LITGSDDHTAKVW----DYQTKSCVQT-LDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Query: 338 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 454
+ + V ++ + +R++V G + TI
Sbjct: 257 HATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTI 295
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 85.4 bits (202), Expect = 3e-17
Identities = 58/171 (33%), Positives = 87/171 (50%), Gaps = 1/171 (0%)
Frame = +2
Query: 101 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 280
+GHN V +P + S S D+T +W + R + P + + GH +SDV
Sbjct: 457 KGHNYPVWDAQFSP-FGHYFASCSHDRTARIWSMDRIQ-----PLRIMAGH---LSDVDW 507
Query: 281 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 460
+ NY +GS DKT+RLWD+ G+ R F H VLS+A S D R + SG D TI +
Sbjct: 508 HPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMM 567
Query: 461 WN-TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTN 610
W+ + A C + GH+ V + +S ++ S D TVK+W +T+
Sbjct: 568 WDLSTARCITPLM--GHNSCVWSLSYSGE--GSLLASGSADCTVKLWDVTS 614
Score = 78.6 bits (185), Expect = 4e-15
Identities = 61/201 (30%), Positives = 96/201 (47%), Gaps = 1/201 (0%)
Frame = +2
Query: 98 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 277
L GH+G V +P D +LSSS D T+ +W + N + K GH++ + D
Sbjct: 414 LLGHSGPVYSATFSPP-GDFVLSSSADTTIRLWSTKLNANL--VCYK---GHNYPVWDAQ 467
Query: 278 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 457
S G+Y S S D+T R+W + + R H DV + + I +GS DKT++
Sbjct: 468 FSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDV---DWHPNCNYIATGSSDKTVR 524
Query: 458 LWNT-LAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHL 634
LW+ EC GH V + SP+ + S D T+ +W L+ + +
Sbjct: 525 LWDVQTGECVRIFI--GHRSMVLSLAMSPD--GRYMASGDEDGTIMMWDLSTARCITPLM 580
Query: 635 GHSGYLNTVTVSPDGSLCASG 697
GH+ + +++ S +GSL ASG
Sbjct: 581 GHNSCVWSLSYSGEGSLLASG 601
Score = 70.9 bits (166), Expect = 7e-13
Identities = 43/156 (27%), Positives = 76/156 (48%), Gaps = 2/156 (1%)
Frame = +2
Query: 98 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 277
LR G ++ + +P + I + S DKT+ +W + E + GH + +
Sbjct: 495 LRIMAGHLSDVDWHPNC-NYIATGSSDKTVRLWDVQTGEC-----VRIFIGHRSMVLSLA 548
Query: 278 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 457
+S DG Y SG D T+ +WDL+ + H V S+++S + + SGS D T+K
Sbjct: 549 MSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVK 608
Query: 458 LWNTLAECKYTIQDD--GHSDWVSCVRFSPNHANPI 559
LW+ + K T ++ G+S+ + +R P + P+
Sbjct: 609 LWDVTSSTKLTKAEEKNGNSNRLRSLRTFPTKSTPV 644
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 84.6 bits (200), Expect = 6e-17
Identities = 52/153 (33%), Positives = 74/153 (48%), Gaps = 1/153 (0%)
Frame = +2
Query: 242 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 421
LYGHS I V + +G+ T++LWDL K R H + +SV F
Sbjct: 148 LYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGE 207
Query: 422 QIVSGSRDKTIKLWNTLAE-CKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 598
SGS D +K+W+ + C +T + GH+ V+ +RF+P+ IVS G D VKVW
Sbjct: 208 FFASGSLDTNLKIWDIRKKGCIHTYK--GHTRGVNVLRFTPD--GRWIVSGGEDNVVKVW 263
Query: 599 HLTNCKLKINHLGHSGYLNTVTVSPDGSLCASG 697
LT KL H G + ++ P L A+G
Sbjct: 264 DLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATG 296
Score = 72.1 bits (169), Expect = 3e-13
Identities = 47/182 (25%), Positives = 82/182 (45%), Gaps = 2/182 (1%)
Frame = +2
Query: 74 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 253
E K+ TL GH + +P + + S S D L +W + + + GH
Sbjct: 182 EEAKVVRTLTGHRSNCVSVNFHP-FGEFFASGSLDTNLKIWDIRKKGCIHTYK-----GH 235
Query: 254 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 433
+ ++ + + DG + +SG D +++WDL AGK F+ H + S+ F + +
Sbjct: 236 TRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLAT 295
Query: 434 GSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKV--WHLT 607
GS DKT+K W+ L + + V C+ F+P+ + V CG ++K+ W
Sbjct: 296 GSADKTVKFWD-LETFELIGSGGTETTGVRCLTFNPDGKS---VLCGLQESLKIFSWEPI 351
Query: 608 NC 613
C
Sbjct: 352 RC 353
Score = 55.2 bits (127), Expect = 4e-08
Identities = 34/133 (25%), Positives = 55/133 (41%)
Frame = +2
Query: 302 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 481
++G D + LW + H+ + SV F + +G+ TIKLW+ L E
Sbjct: 126 VTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWD-LEEA 184
Query: 482 KYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTV 661
K GH +CV + + S D +K+W + + GH+ +N +
Sbjct: 185 KVVRTLTGHRS--NCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVL 242
Query: 662 TVSPDGSLCASGG 700
+PDG SGG
Sbjct: 243 RFTPDGRWIVSGG 255
Score = 32.7 bits (71), Expect = 0.24
Identities = 17/64 (26%), Positives = 33/64 (51%)
Frame = +2
Query: 506 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSL 685
HS V+C++ ++ ++V+ G D V +W + ++ GHS +++VT L
Sbjct: 108 HSAAVNCLKIG-RKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGL 166
Query: 686 CASG 697
A+G
Sbjct: 167 VAAG 170
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 83.8 bits (198), Expect = 1e-16
Identities = 51/153 (33%), Positives = 74/153 (48%), Gaps = 1/153 (0%)
Frame = +2
Query: 242 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 421
LYGHS I V + +G+ T++LWDL K R H + +SV F
Sbjct: 55 LYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGE 114
Query: 422 QIVSGSRDKTIKLWNTLAE-CKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 598
SGS D +K+W+ + C +T + GH+ V+ +RF+P+ +VS G D VKVW
Sbjct: 115 FFASGSLDTNLKIWDIRKKGCIHTYK--GHTRGVNVLRFTPD--GRWVVSGGEDNIVKVW 170
Query: 599 HLTNCKLKINHLGHSGYLNTVTVSPDGSLCASG 697
LT KL H G + ++ P L A+G
Sbjct: 171 DLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATG 203
Score = 70.1 bits (164), Expect = 1e-12
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 2/182 (1%)
Frame = +2
Query: 74 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 253
E K+ TL GH + +P + + S S D L +W + + + GH
Sbjct: 89 EEAKIVRTLTGHRSNCISVDFHP-FGEFFASGSLDTNLKIWDIRKKGCIHTYK-----GH 142
Query: 254 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 433
+ ++ + + DG + +SG D +++WDL AGK F+ H + S+ F + +
Sbjct: 143 TRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLAT 202
Query: 434 GSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKV--WHLT 607
GS D+T+K W+ L + + V C+ F+P+ V CG ++K+ W
Sbjct: 203 GSADRTVKFWD-LETFELIGSGGPETAGVRCLSFNPDGKT---VLCGLQESLKIFSWEPI 258
Query: 608 NC 613
C
Sbjct: 259 RC 260
Score = 54.0 bits (124), Expect = 9e-08
Identities = 33/133 (24%), Positives = 54/133 (40%)
Frame = +2
Query: 302 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 481
++G D + LW + H+ + SV F + +G+ TIKLW+ L E
Sbjct: 33 VTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWD-LEEA 91
Query: 482 KYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTV 661
K GH +C+ + S D +K+W + + GH+ +N +
Sbjct: 92 KIVRTLTGHRS--NCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVL 149
Query: 662 TVSPDGSLCASGG 700
+PDG SGG
Sbjct: 150 RFTPDGRWVVSGG 162
Score = 32.3 bits (70), Expect = 0.32
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +2
Query: 485 YTIQDD-GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTV 661
Y +Q+ HS V+C++ ++ ++V+ G D V +W + ++ GHS +++V
Sbjct: 7 YKLQEFVAHSAAVNCLKIG-RKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSV 65
Query: 662 TVSPDGSLCASG 697
T L A+G
Sbjct: 66 TFDASEVLVAAG 77
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 83.8 bits (198), Expect = 1e-16
Identities = 51/153 (33%), Positives = 74/153 (48%), Gaps = 1/153 (0%)
Frame = +2
Query: 242 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 421
LYGHS I V + +G+ T++LWDL K R H + +SV F
Sbjct: 55 LYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGE 114
Query: 422 QIVSGSRDKTIKLWNTLAE-CKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 598
SGS D +K+W+ + C +T + GH+ V+ +RF+P+ +VS G D VKVW
Sbjct: 115 FFASGSLDTNLKIWDIRKKGCIHTYK--GHTRGVNVLRFTPD--GRWVVSGGEDNIVKVW 170
Query: 599 HLTNCKLKINHLGHSGYLNTVTVSPDGSLCASG 697
LT KL H G + ++ P L A+G
Sbjct: 171 DLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATG 203
Score = 70.1 bits (164), Expect = 1e-12
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 2/182 (1%)
Frame = +2
Query: 74 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 253
E K+ TL GH + +P + + S S D L +W + + + GH
Sbjct: 89 EEAKIVRTLTGHRSNCISVDFHP-FGEFFASGSLDTNLKIWDIRKKGCIHTYK-----GH 142
Query: 254 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 433
+ ++ + + DG + +SG D +++WDL AGK F+ H + S+ F + +
Sbjct: 143 TRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLAT 202
Query: 434 GSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKV--WHLT 607
GS D+T+K W+ L + + V C+ F+P+ V CG ++K+ W
Sbjct: 203 GSADRTVKFWD-LETFELIGSGGPETAGVRCLSFNPDGKT---VLCGLQESLKIFSWEPI 258
Query: 608 NC 613
C
Sbjct: 259 RC 260
Score = 54.0 bits (124), Expect = 9e-08
Identities = 33/133 (24%), Positives = 54/133 (40%)
Frame = +2
Query: 302 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 481
++G D + LW + H+ + SV F + +G+ TIKLW+ L E
Sbjct: 33 VTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWD-LEEA 91
Query: 482 KYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTV 661
K GH +C+ + S D +K+W + + GH+ +N +
Sbjct: 92 KIVRTLTGHRS--NCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVL 149
Query: 662 TVSPDGSLCASGG 700
+PDG SGG
Sbjct: 150 RFTPDGRWVVSGG 162
Score = 32.3 bits (70), Expect = 0.32
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +2
Query: 485 YTIQDD-GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTV 661
Y +Q+ HS V+C++ ++ ++V+ G D V +W + ++ GHS +++V
Sbjct: 7 YKLQEFVAHSAAVNCLKIG-RKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSV 65
Query: 662 TVSPDGSLCASG 697
T L A+G
Sbjct: 66 TFDASEVLVAAG 77
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 83.0 bits (196), Expect = 2e-16
Identities = 55/176 (31%), Positives = 90/176 (51%), Gaps = 4/176 (2%)
Frame = +2
Query: 107 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS- 283
H+ ++ +A +P P +LSSS D + +W E + Q GHSH++ V +
Sbjct: 98 HSDYIRCVAVHPTLP-YVLSSSDDMLIKLWDW---EKGWACTQI-FEGHSHYVMQVTFNP 152
Query: 284 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV--DNRQIVSGSRDKTIK 457
D N S S D+T+++W+L + + H K V V + D +++GS D T K
Sbjct: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAK 212
Query: 458 LWNTLAE-CKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLK 622
+W+ + C T++ GH+ VS V F P PII++ D TV++WH T +L+
Sbjct: 213 VWDYQTKSCVQTLE--GHTHNVSAVCFHPEL--PIIITGSEDGTVRIWHATTYRLE 264
Score = 70.9 bits (166), Expect = 7e-13
Identities = 37/123 (30%), Positives = 63/123 (51%), Gaps = 2/123 (1%)
Frame = +2
Query: 104 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFIS--DVV 277
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ L H ++ D
Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF-----TLDAHQKGVNCVDYF 194
Query: 278 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 457
D Y ++GS D T ++WD + E HT +V +V F + I++GS D T++
Sbjct: 195 TGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVR 254
Query: 458 LWN 466
+W+
Sbjct: 255 IWH 257
Score = 70.1 bits (164), Expect = 1e-12
Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 3/152 (1%)
Frame = +2
Query: 251 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFSV-DNRQ 424
HS +I V + Y LS S D ++LWD G T+ FE H+ V+ V F+ D
Sbjct: 98 HSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNT 157
Query: 425 IVSGSRDKTIKLWNTLA-ECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 601
S S D+TIK+WN + + +T+ D H V+CV + P +++ D T KVW
Sbjct: 158 FASASLDRTIKIWNLGSPDPNFTL--DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 215
Query: 602 LTNCKLKINHLGHSGYLNTVTVSPDGSLCASG 697
GH+ ++ V P+ + +G
Sbjct: 216 YQTKSCVQTLEGHTHNVSAVCFHPELPIIITG 247
Score = 49.2 bits (112), Expect = 3e-06
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 3/150 (2%)
Frame = +2
Query: 233 QKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 412
+++L S + V L + L+ + TL +W+ + FE V S F
Sbjct: 8 KRKLAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQVMAKSFEVTELPVRSAKFVA 67
Query: 413 DNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVK 592
+ +V+G+ D I+++N K + + HSD++ CV P P ++S D +K
Sbjct: 68 RKQWVVAGADDMYIRVYNYNTMDKVKVFE-AHSDYIRCVAVHP--TLPYVLSSSDDMLIK 124
Query: 593 VWHLTN---CKLKINHLGHSGYLNTVTVSP 673
+W C GHS Y+ VT +P
Sbjct: 125 LWDWEKGWACTQIFE--GHSHYVMQVTFNP 152
Score = 35.5 bits (78), Expect = 0.034
Identities = 25/99 (25%), Positives = 44/99 (44%)
Frame = +2
Query: 158 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 337
+++ S D T VW D Q L GH+H +S V + ++GS D T+R+W
Sbjct: 202 LITGSDDHTAKVW----DYQTKSCVQT-LEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Query: 338 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 454
+ + V ++ + +R++V G + TI
Sbjct: 257 HATTYRLENTLNYGLERVWAIGYIKSSRRVVIGYDEGTI 295
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 82.2 bits (194), Expect = 3e-16
Identities = 54/176 (30%), Positives = 89/176 (50%), Gaps = 4/176 (2%)
Frame = +2
Query: 107 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS- 283
H ++ +A +P P +LSSS D + +W D + + GHSH++ V +
Sbjct: 98 HADYIRCVAVHPTLP-YVLSSSDDMLIKLW----DWEKGWLCTQIFEGHSHYVMQVTFNP 152
Query: 284 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV--DNRQIVSGSRDKTIK 457
D N S S D+T+++W+L + + H K V V + D +++GS D T K
Sbjct: 153 KDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAK 212
Query: 458 LWNTLAE-CKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLK 622
+W+ + C T++ GH+ VS V F P PII++ D TV++WH T +L+
Sbjct: 213 VWDYQTKSCVQTLE--GHTHNVSAVSFHPEL--PIIITGSEDGTVRIWHATTYRLE 264
Score = 72.1 bits (169), Expect = 3e-13
Identities = 37/121 (30%), Positives = 64/121 (52%)
Frame = +2
Query: 104 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 283
GH+ +V Q+ NPK + S+S D+T+ +W L + N+ + L G + D
Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAHLKGVN--CVDYFTG 196
Query: 284 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 463
D Y ++GS D T ++WD + E HT +V +V+F + I++GS D T+++W
Sbjct: 197 GDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIW 256
Query: 464 N 466
+
Sbjct: 257 H 257
Score = 31.5 bits (68), Expect = 0.56
Identities = 24/99 (24%), Positives = 43/99 (43%)
Frame = +2
Query: 158 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 337
+++ S D T VW D Q L GH+H +S V + ++GS D T+R+W
Sbjct: 202 LITGSDDHTAKVW----DYQTKSCVQT-LEGHTHNVSAVSFHPELPIIITGSEDGTVRIW 256
Query: 338 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 454
+ + V ++ +R++V G + +I
Sbjct: 257 HATTYRLENTLNYGLERVWAIGHIKGSRRVVIGYDEGSI 295
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 80.6 bits (190), Expect = 9e-16
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 1/201 (0%)
Frame = +2
Query: 95 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 274
T GH + ++A +P + ++S DKT +W + N G GHS + +
Sbjct: 334 TFEGHLDRLARVAFHPS-GKYLGTTSYDKTWRLWDI-----NTGAELLLQEGHSRSVYGI 387
Query: 275 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 454
DG A S D R+WDL G++ F+ H K V SV FS + + SG D
Sbjct: 388 AFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQC 447
Query: 455 KLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINH 631
++W+ + + Y I H++ VS V++ P + + +D V +W + L +
Sbjct: 448 RIWDLRMRKSLYII--PAHANLVSQVKYEPQEGY-FLATASYDMKVNIWSGRDFSLVKSL 504
Query: 632 LGHSGYLNTVTVSPDGSLCAS 694
GH + ++ ++ D S A+
Sbjct: 505 AGHESKVASLDITADSSCIAT 525
Score = 70.9 bits (166), Expect = 7e-13
Identities = 50/170 (29%), Positives = 79/170 (46%)
Frame = +2
Query: 191 VWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF 370
+W++ + N + L H +DVV S + + S D+T +LW G + F
Sbjct: 281 LWEMPQVTNTIAV----LKDHKERATDVVFSPVDDCLATASADRTAKLWK-TDGTLLQTF 335
Query: 371 EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHA 550
E H + VAF + + + S DKT +LW+ + +Q+ GHS V + F + A
Sbjct: 336 EGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQE-GHSRSVYGIAFQQDGA 394
Query: 551 NPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG 700
+ SCG D +VW L + + GH + +V SP+G ASGG
Sbjct: 395 --LAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGG 442
Score = 44.4 bits (100), Expect = 7e-05
Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 1/105 (0%)
Frame = +2
Query: 158 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS-SDGNYALSGSWDKTLRL 334
+ S D +W L ++ Y IP H++ +S V +G + + S+D + +
Sbjct: 438 LASGGEDNQCRIWDLRMRKSLYIIP-----AHANLVSQVKYEPQEGYFLATASYDMKVNI 492
Query: 335 WDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 469
W + H V S+ + D+ I + S D+TIKLW +
Sbjct: 493 WSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLWTS 537
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 79.0 bits (186), Expect = 3e-15
Identities = 49/153 (32%), Positives = 75/153 (49%), Gaps = 1/153 (0%)
Frame = +2
Query: 242 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 421
L GH+ + V +S+ L+G+ ++LWDL K R F H + +V F
Sbjct: 3 LCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGE 62
Query: 422 QIVSGSRDKTIKLWNTLAE-CKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 598
+ SGS D +++W+T + C T + GH+ +S + FSP+ +VS G D VKVW
Sbjct: 63 FLASGSSDTNLRVWDTRKKGCIQTYK--GHTRGISTIEFSPD--GRWVVSGGLDNVVKVW 118
Query: 599 HLTNCKLKINHLGHSGYLNTVTVSPDGSLCASG 697
LT KL H G + ++ P L A+G
Sbjct: 119 DLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATG 151
Score = 69.7 bits (163), Expect = 2e-12
Identities = 51/183 (27%), Positives = 80/183 (43%), Gaps = 2/183 (1%)
Frame = +2
Query: 74 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 253
E K+ GH + + +P + + + S S D L VW D G Q GH
Sbjct: 37 EESKMVRAFTGHRSNCSAVEFHP-FGEFLASGSSDTNLRVW----DTRKKGCIQT-YKGH 90
Query: 254 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 433
+ IS + S DG + +SG D +++WDL AGK F+ H + S+ F + +
Sbjct: 91 TRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLAT 150
Query: 434 GSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKV--WHLT 607
GS D+T+K W+ L + + V + F P+ + CG D +KV W
Sbjct: 151 GSADRTVKFWD-LETFELIGTTRPEATGVRAIAFHPDGQT---LFCGLDDGLKVYSWEPV 206
Query: 608 NCK 616
C+
Sbjct: 207 ICR 209
Score = 54.8 bits (126), Expect = 5e-08
Identities = 35/108 (32%), Positives = 50/108 (46%)
Frame = +2
Query: 377 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 556
HT V SVAF+ + +++G+ IKLW+ L E K GH S V F P
Sbjct: 6 HTSPVDSVAFNSEEVLVLAGASSGVIKLWD-LEESKMVRAFTGHRSNCSAVEFHP--FGE 62
Query: 557 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG 700
+ S D ++VW + GH+ ++T+ SPDG SGG
Sbjct: 63 FLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGG 110
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 78.2 bits (184), Expect = 5e-15
Identities = 50/199 (25%), Positives = 87/199 (43%)
Frame = +2
Query: 98 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 277
++GH GWV +A +P + + S D+T+ +W + G+ + L GH + +
Sbjct: 172 IQGHLGWVRSVAFDPSN-EWFCTGSADRTIKIWDVAT-----GVLKLTLTGHIEQVRGLA 225
Query: 278 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 457
+S+ Y S DK ++ WDL K R + H V +A +++G RD +
Sbjct: 226 VSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCR 285
Query: 458 LWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLG 637
+W+ + + GH + V V P +P +V+ D T+K W L K
Sbjct: 286 VWDIRTKMQ-IFALSGHDNTVCSVFTRP--TDPQVVTGSHDTTIKFWDLRYGKTMSTLTH 342
Query: 638 HSGYLNTVTVSPDGSLCAS 694
H + +T+ P + AS
Sbjct: 343 HKKSVRAMTLHPKENAFAS 361
Score = 52.0 bits (119), Expect = 4e-07
Identities = 35/128 (27%), Positives = 52/128 (40%)
Frame = +2
Query: 74 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 253
E K+ + GH V +A +P D++L+ RD VW + + L GH
Sbjct: 248 EQNKVIRSYHGHLSGVYCLALHPTL-DVLLTGGRDSVCRVWDIRTKMQIFA-----LSGH 301
Query: 254 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 433
+ + V ++GS D T++ WDL GKT H K V ++ S
Sbjct: 302 DNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFAS 361
Query: 434 GSRDKTIK 457
S D T K
Sbjct: 362 ASADNTKK 369
Score = 51.2 bits (117), Expect = 6e-07
Identities = 36/119 (30%), Positives = 55/119 (46%)
Frame = +2
Query: 344 AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVS 523
A K R + H V SVAF N +GS D+TIK+W+ +A + GH + V
Sbjct: 164 APWKNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWD-VATGVLKLTLTGHIEQVR 222
Query: 524 CVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG 700
+ S H + S G D+ VK W L K+ ++ GH + + + P + +GG
Sbjct: 223 GLAVSNRHT--YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGG 279
Score = 42.3 bits (95), Expect = 3e-04
Identities = 36/172 (20%), Positives = 68/172 (39%), Gaps = 5/172 (2%)
Frame = +2
Query: 98 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 277
L GH+ V + T P P ++ + S D T+ W L YG L H + +
Sbjct: 298 LSGHDNTVCSVFTRPTDPQVV-TGSHDTTIKFWDL-----RYGKTMSTLTHHKKSVRAMT 351
Query: 278 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 457
L N S S D T + + L G+ K +++ ++ +V+G + +I
Sbjct: 352 LHPKENAFASASADNTKK-FSLPKGEFCHNMLSQQKTIINAMAVNEDGVMVTGGDNGSIW 410
Query: 458 LWN-----TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 598
W+ + + + +Q ++ +V+C D+T+K+W
Sbjct: 411 FWDWKSGHSFQQSETIVQPGSLESEAGIYAACYDNTGSRLVTCEADKTIKMW 462
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 77.8 bits (183), Expect = 7e-15
Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 1/175 (0%)
Frame = +2
Query: 80 LKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSH 259
LK R + H+ + +A + ++ + S D+T +W+L + L GH
Sbjct: 489 LKTRSVVAAHDKDINSVAV-ARNDSLVCTGSEDRTASIWRLPDL-----VHVVTLKGHKR 542
Query: 260 FISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 439
I V S+ ++ S DKT+++W ++ G + FE HT VL +F D Q VS
Sbjct: 543 RIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCG 602
Query: 440 RDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 601
D +KLWN +EC T D H D V + + +I + G D + +WH
Sbjct: 603 ADGLLKLWNVNTSECIATY--DQHEDKVWAL--AVGKKTEMIATGGGDAVINLWH 653
Score = 74.5 bits (175), Expect = 6e-14
Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 5/208 (2%)
Frame = +2
Query: 92 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL--TRDENNYGIPQKR---LYGHS 256
G GHNG + +A K +S S D+TL VW L +++ I K + H
Sbjct: 440 GVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHD 499
Query: 257 HFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSG 436
I+ V ++ + + +GS D+T +W L + H + + SV FS ++ +++
Sbjct: 500 KDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTA 559
Query: 437 SRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCK 616
S DKT+K+W +++ +GH+ V F + VSCG D +K+W++ +
Sbjct: 560 SGDKTVKIW-AISDGSCLKTFEGHTSSVLRASFITDGTQ--FVSCGADGLLKLWNVNTSE 616
Query: 617 LKINHLGHSGYLNTVTVSPDGSLCASGG 700
+ H + + V + A+GG
Sbjct: 617 CIATYDQHEDKVWALAVGKKTEMIATGG 644
Score = 66.1 bits (154), Expect = 2e-11
Identities = 45/147 (30%), Positives = 71/147 (48%), Gaps = 7/147 (4%)
Frame = +2
Query: 74 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 253
ETLK + +GH G V +A + ++ ++ D+ ++VW + + G GH
Sbjct: 90 ETLKCIRSWKGHEGPVMGMACHAS-GGLLATAGADRKVLVWDV-----DGGFCTHYFRGH 143
Query: 254 SHFISDVVLSSDGN--YALSGSWDKTLRLWDLAAGKTTRR----FEDHTKDVLSVAFSVD 415
+S ++ D N +SGS D T+R+WDL A T ++ E H V S+A S D
Sbjct: 144 KGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSED 203
Query: 416 NRQIVSGSRDKTIKLWNTL-AECKYTI 493
+ S RDK + LW+ CK T+
Sbjct: 204 GLTLFSAGRDKVVNLWDLHDYSCKATV 230
Score = 65.7 bits (153), Expect = 3e-11
Identities = 56/221 (25%), Positives = 101/221 (45%), Gaps = 13/221 (5%)
Frame = +2
Query: 77 TLKLRGTLRGHNGWVTQIAT--NPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 250
T+ L GH V + T + +I++ S+DKT+ +W T ++ G+ G
Sbjct: 390 TMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNAT-SKSCIGVGT----G 444
Query: 251 HSHFISDVVLSSDG-NYALSGSWDKTLRLWDLAA----------GKTTRRFEDHTKDVLS 397
H+ I V + ++ +SGS D+TL++W L KT H KD+ S
Sbjct: 445 HNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINS 504
Query: 398 VAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGW 577
VA + ++ + +GS D+T +W L + + + GH + V FS + +++
Sbjct: 505 VAVARNDSLVCTGSEDRTASIWR-LPDLVHVVTLKGHKRRIFSVEFST--VDQCVMTASG 561
Query: 578 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG 700
D+TVK+W +++ GH+ + + DG+ S G
Sbjct: 562 DKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCG 602
Score = 58.8 bits (136), Expect = 3e-09
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 5/156 (3%)
Frame = +2
Query: 248 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 427
G S ++ + LS D S + +R+WDL K R ++ H V+ +A +
Sbjct: 58 GESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLL 117
Query: 428 VSGSRDKTIKLWNTLAE-CKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 604
+ D+ + +W+ C + + GH VS + F P+ I++S D TV+VW L
Sbjct: 118 ATAGADRKVLVWDVDGGFCTHYFR--GHKGVVSSILFHPDSNKNILISGSDDATVRVWDL 175
Query: 605 T--NCKLKINHL--GHSGYLNTVTVSPDGSLCASGG 700
N + K + H + ++ +S DG S G
Sbjct: 176 NAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAG 211
Score = 58.0 bits (134), Expect = 6e-09
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 14/168 (8%)
Frame = +2
Query: 236 KRLYGHSHFISDVVLSSDGNYALSGSWD-KTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 412
KRL G++ I+D+ D L+ + + + +R++D+A + H + VLS+ V
Sbjct: 352 KRLVGYNEEIADMKFLGDEEQFLAVATNLEEVRVYDVATMSCSYVLAGHKEVVLSLDTCV 411
Query: 413 D---NRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDR 583
N IV+GS+DKT++LWN ++ + GH+ + V F+ + VS DR
Sbjct: 412 SSSGNVLIVTGSKDKTVRLWNATSKSCIGV-GTGHNGDILAVAFAKKSFS-FFVSGSGDR 469
Query: 584 TVKVWHL----------TNCKLKINHLGHSGYLNTVTVSPDGSLCASG 697
T+KVW L N K + H +N+V V+ + SL +G
Sbjct: 470 TLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTG 517
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 77.8 bits (183), Expect = 7e-15
Identities = 49/153 (32%), Positives = 73/153 (47%), Gaps = 1/153 (0%)
Frame = +2
Query: 242 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 421
L GH+ + V S L+G+ ++LWD+ K R F H + +V F
Sbjct: 54 LCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGE 113
Query: 422 QIVSGSRDKTIKLWNTLAE-CKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 598
+ SGS D +K+W+ + C T + GHS +S +RF+P+ +VS G D VKVW
Sbjct: 114 FLASGSSDANLKIWDIRKKGCIQTYK--GHSRGISTIRFTPD--GRWVVSGGLDNVVKVW 169
Query: 599 HLTNCKLKINHLGHSGYLNTVTVSPDGSLCASG 697
LT KL H G + ++ P L A+G
Sbjct: 170 DLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATG 202
Score = 70.5 bits (165), Expect = 1e-12
Identities = 47/175 (26%), Positives = 81/175 (46%)
Frame = +2
Query: 74 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 253
E K+ GH + + +P + + + S S D L +W + + G Q GH
Sbjct: 88 EEAKMVRAFTGHRSNCSAVEFHP-FGEFLASGSSDANLKIWDIRKK----GCIQT-YKGH 141
Query: 254 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 433
S IS + + DG + +SG D +++WDL AGK F+ H + S+ F + +
Sbjct: 142 SRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLAT 201
Query: 434 GSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 598
GS D+T+K W+ L + + V ++F P+ + CG D ++KV+
Sbjct: 202 GSADRTVKFWD-LETFELIGSTRPEATGVRSIKFHPDGRT---LFCGLDDSLKVY 252
Score = 58.8 bits (136), Expect = 3e-09
Identities = 38/133 (28%), Positives = 58/133 (43%)
Frame = +2
Query: 302 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 481
++G D + LW + + HT V SVAF +++G+ IKLW+ + E
Sbjct: 32 ITGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWD-VEEA 90
Query: 482 KYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTV 661
K GH S V F P + S D +K+W + + GHS ++T+
Sbjct: 91 KMVRAFTGHRSNCSAVEFHP--FGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTI 148
Query: 662 TVSPDGSLCASGG 700
+PDG SGG
Sbjct: 149 RFTPDGRWVVSGG 161
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 74.9 bits (176), Expect = 5e-14
Identities = 60/216 (27%), Positives = 97/216 (44%), Gaps = 9/216 (4%)
Frame = +2
Query: 77 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 256
T+ + L GH G+V+ P +++SS D+T I+W +T + GH+
Sbjct: 83 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHT 142
Query: 257 HFISDVVLS-SDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDNRQIV 430
+ V +S S+ N+ +SGS D T RLWD AA + R F H DV +V F D +
Sbjct: 143 ADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFG 202
Query: 431 SGSRDKTIKLWNTLAECK---YTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 601
+GS D T +L++ + Y DG + V+ + FS + + + T VW
Sbjct: 203 TGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVS-GRLLFAGYASNNTCYVWD 261
Query: 602 L----TNCKLKINHLGHSGYLNTVTVSPDGSLCASG 697
L + H ++ + +S DGS +G
Sbjct: 262 TLLGEVVLDLGLQQDSHRNRISCLGLSADGSALCTG 297
Score = 61.7 bits (143), Expect = 5e-10
Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 9/152 (5%)
Frame = +2
Query: 116 WVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYG-IPQKR-LYGHSHFISDV-VLSS 286
WV A +P + D ++ L+ + G +P R L GH ++S + +
Sbjct: 47 WVMTCAFSPN-GQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPN 105
Query: 287 DGNYALSGSWDKTLRLWDLAAGKTTRRF-----EDHTKDVLSVAFSVDNRQ-IVSGSRDK 448
+ + ++ S D+T LWD+ G T F HT DVLSV+ S N +SGS D
Sbjct: 106 EDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDS 165
Query: 449 TIKLWNTLAECKYTIQDDGHSDWVSCVRFSPN 544
T +LW+T A + GH V+ V+F P+
Sbjct: 166 TARLWDTRAASRAVRTFHGHEGDVNTVKFFPD 197
Score = 42.7 bits (96), Expect = 2e-04
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 10/140 (7%)
Frame = +2
Query: 293 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW--N 466
N +S S D L +W+ + T + V++ AFS + + + G D ++ +
Sbjct: 16 NRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGLDSVCSIFSLS 75
Query: 467 TLAECKYTIQDD----GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHL 634
+ A+ T+ GH +VSC ++ PN +I S G D+T +W +T LK +
Sbjct: 76 STADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSG-DQTCILWDVTT-GLKTSVF 133
Query: 635 G---HSGY-LNTVTVSPDGS 682
G SG+ + ++VS GS
Sbjct: 134 GGEFQSGHTADVLSVSISGS 153
Score = 39.9 bits (89), Expect = 0.002
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +2
Query: 104 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN--NYGIPQKRLYGHSHFISDVV 277
G NG VT IA + + + + T VW E + G+ Q H + IS +
Sbjct: 230 GENGPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQD---SHRNRISCLG 286
Query: 278 LSSDGNYALSGSWDKTLRLW 337
LS+DG+ +GSWD L++W
Sbjct: 287 LSADGSALCTGSWDSNLKIW 306
Score = 33.5 bits (73), Expect = 0.14
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Frame = +2
Query: 389 VLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVS 568
V S+ ++ + +IVS S+D + +WN L K T WV FSPN + V+
Sbjct: 6 VYSLDWTPERNRIVSASQDGRLIVWNALTSQK-THAIKLPCAWVMTCAFSPNGQS---VA 61
Query: 569 C-GWDRTVKVWHLTNCKLK-----INHL--GHSGYLNTVTVSP--DGSLCASGG 700
C G D ++ L++ K ++ + GH GY++ P D L S G
Sbjct: 62 CGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSG 115
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 74.9 bits (176), Expect = 5e-14
Identities = 60/216 (27%), Positives = 97/216 (44%), Gaps = 9/216 (4%)
Frame = +2
Query: 77 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 256
T+ + L GH G+V+ P +++SS D+T I+W +T + GH+
Sbjct: 145 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHT 204
Query: 257 HFISDVVLS-SDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDNRQIV 430
+ V +S S+ N+ +SGS D T RLWD AA + R F H DV +V F D +
Sbjct: 205 ADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFG 264
Query: 431 SGSRDKTIKLWNTLAECK---YTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 601
+GS D T +L++ + Y DG + V+ + FS + + + T VW
Sbjct: 265 TGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVS-GRLLFAGYASNNTCYVWD 323
Query: 602 L----TNCKLKINHLGHSGYLNTVTVSPDGSLCASG 697
L + H ++ + +S DGS +G
Sbjct: 324 TLLGEVVLDLGLQQDSHRNRISCLGLSADGSALCTG 359
Score = 61.7 bits (143), Expect = 5e-10
Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 9/152 (5%)
Frame = +2
Query: 116 WVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYG-IPQKR-LYGHSHFISDV-VLSS 286
WV A +P + D ++ L+ + G +P R L GH ++S + +
Sbjct: 109 WVMTCAFSPN-GQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPN 167
Query: 287 DGNYALSGSWDKTLRLWDLAAGKTTRRF-----EDHTKDVLSVAFSVDNRQ-IVSGSRDK 448
+ + ++ S D+T LWD+ G T F HT DVLSV+ S N +SGS D
Sbjct: 168 EDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDS 227
Query: 449 TIKLWNTLAECKYTIQDDGHSDWVSCVRFSPN 544
T +LW+T A + GH V+ V+F P+
Sbjct: 228 TARLWDTRAASRAVRTFHGHEGDVNTVKFFPD 259
Score = 47.2 bits (107), Expect = 1e-05
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Frame = +2
Query: 236 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 415
+ L GH+ + + + + N +S S D L +W+ + T + V++ AFS +
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPN 118
Query: 416 NRQIVSGSRDKTIKLW--NTLAECKYTIQDD----GHSDWVSCVRFSPNHANPIIVSCGW 577
+ + G D ++ ++ A+ T+ GH +VSC ++ PN +I S G
Sbjct: 119 GQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSG- 177
Query: 578 DRTVKVWHLTNCKLKINHLG---HSGY-LNTVTVSPDGS 682
D+T +W +T LK + G SG+ + ++VS GS
Sbjct: 178 DQTCILWDVTT-GLKTSVFGGEFQSGHTADVLSVSISGS 215
Score = 39.9 bits (89), Expect = 0.002
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +2
Query: 104 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN--NYGIPQKRLYGHSHFISDVV 277
G NG VT IA + + + + T VW E + G+ Q H + IS +
Sbjct: 292 GENGPVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQD---SHRNRISCLG 348
Query: 278 LSSDGNYALSGSWDKTLRLW 337
LS+DG+ +GSWD L++W
Sbjct: 349 LSADGSALCTGSWDSNLKIW 368
Score = 39.5 bits (88), Expect = 0.002
Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 10/123 (8%)
Frame = +2
Query: 362 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 541
R + HT V S+ ++ + +IVS S+D + +WN L K T WV FSP
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQK-THAIKLPCAWVMTCAFSP 117
Query: 542 NHANPIIVSC-GWDRTVKVWHLTNCKLK-----INHL--GHSGYLNTVTVSP--DGSLCA 691
N + V+C G D ++ L++ K ++ + GH GY++ P D L
Sbjct: 118 NGQS---VACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLIT 174
Query: 692 SGG 700
S G
Sbjct: 175 SSG 177
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 72.1 bits (169), Expect = 3e-13
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 5/159 (3%)
Frame = +2
Query: 77 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 256
T+ + L GH G+V+ P +++SS D+T I+W +T + GH+
Sbjct: 145 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHT 204
Query: 257 HFISDVVLS-SDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDNRQIV 430
+ V +S S+ N+ +SGS D T RLWD AA + R F H DV +V F D +
Sbjct: 205 ADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFG 264
Query: 431 SGSRDKTIKLWNTLAECK---YTIQDDGHSDWVSCVRFS 538
+GS D T +L++ + Y DG + V+ + FS
Sbjct: 265 TGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFS 303
Score = 61.7 bits (143), Expect = 5e-10
Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 9/152 (5%)
Frame = +2
Query: 116 WVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYG-IPQKR-LYGHSHFISDV-VLSS 286
WV A +P + D ++ L+ + G +P R L GH ++S + +
Sbjct: 109 WVMTCAFSPN-GQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPN 167
Query: 287 DGNYALSGSWDKTLRLWDLAAGKTTRRF-----EDHTKDVLSVAFSVDNRQ-IVSGSRDK 448
+ + ++ S D+T LWD+ G T F HT DVLSV+ S N +SGS D
Sbjct: 168 EDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCDS 227
Query: 449 TIKLWNTLAECKYTIQDDGHSDWVSCVRFSPN 544
T +LW+T A + GH V+ V+F P+
Sbjct: 228 TARLWDTRAASRAVRTFHGHEGDVNTVKFFPD 259
Score = 50.8 bits (116), Expect = 9e-07
Identities = 55/215 (25%), Positives = 88/215 (40%), Gaps = 14/215 (6%)
Frame = +2
Query: 95 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 274
TL+GH G V + P+ + I+S+S+D LIVW + + I + +
Sbjct: 60 TLQGHTGKVYSLDWTPER-NRIVSASQDGRLIVWNALTSQKTHAIKLPCAW-----VMTC 113
Query: 275 VLSSDGNYALSGSWDKTLRLWDLA--AGK-----TTRRFEDHTKDVLSVAFSVDNRQ--I 427
S +G G D ++ L+ A K +R H + +S V N +
Sbjct: 114 AFSPNGQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGH-RGYVSCCQYVPNEDAHL 172
Query: 428 VSGSRDKTIKLWNTLAECKYTIQ----DDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKV 595
++ S D+T LW+ K ++ GH+ V V S ++ N I S D T ++
Sbjct: 173 ITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWFI-SGSCDSTARL 231
Query: 596 WHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASG 697
W + GH G +NTV PDG +G
Sbjct: 232 WDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTG 266
Score = 47.2 bits (107), Expect = 1e-05
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Frame = +2
Query: 236 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 415
+ L GH+ + + + + N +S S D L +W+ + T + V++ AFS +
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPN 118
Query: 416 NRQIVSGSRDKTIKLW--NTLAECKYTIQDD----GHSDWVSCVRFSPNHANPIIVSCGW 577
+ + G D ++ ++ A+ T+ GH +VSC ++ PN +I S G
Sbjct: 119 GQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSG- 177
Query: 578 DRTVKVWHLTNCKLKINHLG---HSGY-LNTVTVSPDGS 682
D+T +W +T LK + G SG+ + ++VS GS
Sbjct: 178 DQTCILWDVTT-GLKTSVFGGEFQSGHTADVLSVSISGS 215
Score = 39.5 bits (88), Expect = 0.002
Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 10/123 (8%)
Frame = +2
Query: 362 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 541
R + HT V S+ ++ + +IVS S+D + +WN L K T WV FSP
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQK-THAIKLPCAWVMTCAFSP 117
Query: 542 NHANPIIVSC-GWDRTVKVWHLTNCKLK-----INHL--GHSGYLNTVTVSP--DGSLCA 691
N + V+C G D ++ L++ K ++ + GH GY++ P D L
Sbjct: 118 NGQS---VACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLIT 174
Query: 692 SGG 700
S G
Sbjct: 175 SSG 177
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 72.1 bits (169), Expect = 3e-13
Identities = 46/192 (23%), Positives = 82/192 (42%)
Frame = +2
Query: 98 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 277
L+GH GWV +A +P + + S D+T+ +W + G+ + L GH + +
Sbjct: 166 LQGHLGWVRSVAFDPSN-EWFCTGSADRTIKIWDVAT-----GVLKLTLTGHIGQVRGLA 219
Query: 278 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 457
+S+ Y S DK ++ WDL K R + H V +A +++G RD +
Sbjct: 220 VSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCR 279
Query: 458 LWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLG 637
+W+ + + + H V V P +P +++ D T+K W L K
Sbjct: 280 VWDIRTKMQIFVLP--HDSDVFSVLARP--TDPQVITGSHDSTIKFWDLRYGKSMATITN 335
Query: 638 HSGYLNTVTVSP 673
H + + + P
Sbjct: 336 HKKTVRAMALHP 347
Score = 51.6 bits (118), Expect = 5e-07
Identities = 52/193 (26%), Positives = 81/193 (41%), Gaps = 6/193 (3%)
Frame = +2
Query: 140 PKYPDMILSSSRDKTLIVWKLT--RDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGS 313
PK + S+ +K L+V RD NN G P K + + S+ N + +
Sbjct: 88 PKGSKELRKSATEKALVVGPTLPPRDLNNTGNPGKS----TAILPAPGSFSERNLSTAAL 143
Query: 314 WDKTLRLWDL----AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 481
++ W A K R + H V SVAF N +GS D+TIK+W+ +A
Sbjct: 144 MERMPSRWPRPEWHAPWKNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWD-VATG 202
Query: 482 KYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTV 661
+ GH V + S H + S G D+ VK W L K+ ++ GH + +
Sbjct: 203 VLKLTLTGHIGQVRGLAVSNRHT--YMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCL 260
Query: 662 TVSPDGSLCASGG 700
+ P + +GG
Sbjct: 261 ALHPTLDVVLTGG 273
Score = 50.0 bits (114), Expect = 1e-06
Identities = 34/128 (26%), Positives = 54/128 (42%)
Frame = +2
Query: 74 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 253
E K+ + GH V +A +P D++L+ RD VW + + +P H
Sbjct: 242 EQNKVIRSYHGHLHGVYCLALHPTL-DVVLTGGRDSVCRVWDIRTKMQIFVLP------H 294
Query: 254 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 433
+ V+ ++GS D T++ WDL GK+ +H K V ++A VS
Sbjct: 295 DSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKENDFVS 354
Query: 434 GSRDKTIK 457
S D K
Sbjct: 355 ASADNIKK 362
Score = 32.7 bits (71), Expect = 0.24
Identities = 31/169 (18%), Positives = 62/169 (36%), Gaps = 5/169 (2%)
Frame = +2
Query: 107 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS 286
H+ V + P P +I + S D T+ W L YG + H + + L
Sbjct: 294 HDSDVFSVLARPTDPQVI-TGSHDSTIKFWDL-----RYGKSMATITNHKKTVRAMALHP 347
Query: 287 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 466
N +S S D ++ + L G+ +D+++ ++ +V+G + W+
Sbjct: 348 KENDFVSASADN-IKKFSLPKGEFCHNMLSLQRDIINAVAVNEDGVMVTGGDKGGLWFWD 406
Query: 467 -----TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 598
+ +Q + +V+C D+T+K+W
Sbjct: 407 WKSGHNFQRAETIVQPGSLESEAGIYAACYDQTGSRLVTCEGDKTIKMW 455
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 70.5 bits (165), Expect = 1e-12
Identities = 36/119 (30%), Positives = 66/119 (55%)
Frame = +2
Query: 242 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 421
L GH + + DGNYAL+ D+T+RLW+ G + ++ H ++V V + DN
Sbjct: 14 LKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNA 73
Query: 422 QIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 598
+ S D+ + W+ ++ + + GH V+ V+F N ++ ++VS G+DR+++VW
Sbjct: 74 KFCSCGGDRQVYYWD-VSTGRVIRKFRGHDGEVNAVKF--NDSSSVVVSAGFDRSLRVW 129
Score = 64.1 bits (149), Expect = 9e-11
Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 1/201 (0%)
Frame = +2
Query: 98 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 277
L+GH G V N + L+ +D+T+ +W R GI K H + DV
Sbjct: 14 LKGHEGAVLAARFNGD-GNYALTCGKDRTIRLWNPHR-----GILIKTYKSHGREVRDVH 67
Query: 278 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 457
++SD S D+ + WD++ G+ R+F H +V +V F+ + +VS D++++
Sbjct: 68 VTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLR 127
Query: 458 LWNTLAECKYTIQ-DDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHL 634
+W+ + +Q D D V V + I+ D TV+ + + + ++L
Sbjct: 128 VWDCRSHSVEPVQIIDTFLDTVMSVVLTKTE----IIGGSVDGTVRTFDMRIGREMSDNL 183
Query: 635 GHSGYLNTVTVSPDGSLCASG 697
G +N +++S DG+ +G
Sbjct: 184 GQP--VNCISISNDGNCVLAG 202
Score = 48.0 bits (109), Expect = 6e-06
Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 2/114 (1%)
Frame = +2
Query: 263 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN--RQIVSG 436
++ + +S+DGN L+G D TLRL D G+ + ++ H + N ++ G
Sbjct: 187 VNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDAHVIGG 246
Query: 437 SRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 598
S D + W+ L + K + H V+ V + P +++ D T++VW
Sbjct: 247 SEDGLVFFWD-LVDAKVLSKFRAHDLVVTSVSYHPK--EDCMLTSSVDGTIRVW 297
Score = 46.4 bits (105), Expect = 2e-05
Identities = 31/116 (26%), Positives = 49/116 (42%)
Frame = +2
Query: 353 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVR 532
K + H VL+ F+ D ++ +D+TI+LWN H V V
Sbjct: 9 KEAHILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKS-HGREVRDVH 67
Query: 533 FSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG 700
+ ++A SCG DR V W ++ ++ GH G +N V + S+ S G
Sbjct: 68 VTSDNAK--FCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAG 121
Score = 30.7 bits (66), Expect = 0.98
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2
Query: 83 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 199
K+ R H+ VT ++ +PK D +L+SS D T+ VWK
Sbjct: 261 KVLSKFRAHDLVVTSVSYHPK-EDCMLTSSVDGTIRVWK 298
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 70.1 bits (164), Expect = 1e-12
Identities = 64/211 (30%), Positives = 96/211 (45%), Gaps = 7/211 (3%)
Frame = +2
Query: 83 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 262
KLR L GH+ V I + I +SSRD+T+ VW L + +K L GH+ F
Sbjct: 11 KLRCELHGHDDDVRGICVCND--ENIATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSF 68
Query: 263 ISDVV-LSSDGNY----ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 427
+ + + Y +SGS D + +W+L G+ + + H V VA +DN I
Sbjct: 69 VGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVA--IDNEDI 126
Query: 428 VSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLT 607
VS S D+T+K W + D H + V P+ +VS D ++K+W
Sbjct: 127 VSSSVDQTLKRWR---NGQLVESWDAHQSPIQAVIRLPSGE---LVSGSSDASLKLW--- 177
Query: 608 NCKLKINHL-GHSGYLNTVTVSPD-GSLCAS 694
K + L GH+ + + V PD G L AS
Sbjct: 178 KGKTSLQTLSGHTDTVRGLAVMPDLGFLSAS 208
Score = 56.0 bits (129), Expect = 2e-08
Identities = 56/182 (30%), Positives = 84/182 (46%), Gaps = 1/182 (0%)
Frame = +2
Query: 95 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 274
TL+GH VT +A + + I+SSS D+TL W+ + ++ H I V
Sbjct: 108 TLKGHQMQVTGVAIDN---EDIVSSSVDQTLKRWRNGQLVESWD-------AHQSPIQAV 157
Query: 275 VLSSDGNYALSGSWDKTLRLWDLAAGKTT-RRFEDHTKDVLSVAFSVDNRQIVSGSRDKT 451
+ G +SGS D +L+LW GKT+ + HT V +A D +S S D +
Sbjct: 158 IRLPSGEL-VSGSSDASLKLWK---GKTSLQTLSGHTDTVRGLAVMPD-LGFLSASHDGS 212
Query: 452 IKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINH 631
I+LW E ++ GH+ V V H++ +IVS DR K+W C + H
Sbjct: 213 IRLWALSGEV--LLEMVGHTSLVYSV---DAHSSGLIVSASEDRHAKIWKDGVCVQSLEH 267
Query: 632 LG 637
G
Sbjct: 268 PG 269
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 70.1 bits (164), Expect = 1e-12
Identities = 64/211 (30%), Positives = 96/211 (45%), Gaps = 7/211 (3%)
Frame = +2
Query: 83 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 262
KLR L GH+ V I + I +SSRD+T+ VW L + +K L GH+ F
Sbjct: 11 KLRCELHGHDDDVRGICVCND--ENIATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSF 68
Query: 263 ISDVV-LSSDGNY----ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 427
+ + + Y +SGS D + +W+L G+ + + H V VA +DN I
Sbjct: 69 VGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVA--IDNEDI 126
Query: 428 VSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLT 607
VS S D+T+K W + D H + V P+ +VS D ++K+W
Sbjct: 127 VSSSVDQTLKRWR---NGQLVESWDAHQSPIQAVIRLPSGE---LVSGSSDASLKLW--- 177
Query: 608 NCKLKINHL-GHSGYLNTVTVSPD-GSLCAS 694
K + L GH+ + + V PD G L AS
Sbjct: 178 KGKTSLQTLSGHTDTVRGLAVMPDLGFLSAS 208
Score = 56.0 bits (129), Expect = 2e-08
Identities = 56/182 (30%), Positives = 84/182 (46%), Gaps = 1/182 (0%)
Frame = +2
Query: 95 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 274
TL+GH VT +A + + I+SSS D+TL W+ + ++ H I V
Sbjct: 108 TLKGHQMQVTGVAIDN---EDIVSSSVDQTLKRWRNGQLVESWD-------AHQSPIQAV 157
Query: 275 VLSSDGNYALSGSWDKTLRLWDLAAGKTT-RRFEDHTKDVLSVAFSVDNRQIVSGSRDKT 451
+ G +SGS D +L+LW GKT+ + HT V +A D +S S D +
Sbjct: 158 IRLPSGEL-VSGSSDASLKLWK---GKTSLQTLSGHTDTVRGLAVMPD-LGFLSASHDGS 212
Query: 452 IKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINH 631
I+LW E ++ GH+ V V H++ +IVS DR K+W C + H
Sbjct: 213 IRLWALSGEV--LLEMVGHTSLVYSV---DAHSSGLIVSASEDRHAKIWKDGVCVQSLEH 267
Query: 632 LG 637
G
Sbjct: 268 PG 269
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 68.9 bits (161), Expect = 3e-12
Identities = 40/155 (25%), Positives = 76/155 (49%), Gaps = 10/155 (6%)
Frame = +2
Query: 263 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 442
I + +++G Y + G + LW++A GK +++ H + V + FS D+ +VSGS+
Sbjct: 81 IKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQ 140
Query: 443 DKTIKLWNTL----------AECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVK 592
D +I++W+ + Y + H+ V+ + N +I+S DRT K
Sbjct: 141 DGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVTDIVIDYGGCNAVIISSSEDRTCK 200
Query: 593 VWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASG 697
VW L+ KL + ++ +N + + P G + +G
Sbjct: 201 VWSLSRGKL-LKNIIFPSVINALALDPGGCVFYAG 234
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 13/90 (14%)
Frame = +2
Query: 236 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL---------AAGKT--TRRFEDHT 382
K+ +GH ++ +V S D + +SGS D ++R+W L G T F +HT
Sbjct: 114 KKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHT 173
Query: 383 KDVLSVAFSVD--NRQIVSGSRDKTIKLWN 466
V + N I+S S D+T K+W+
Sbjct: 174 MSVTDIVIDYGGCNAVIISSSEDRTCKVWS 203
Score = 31.1 bits (67), Expect = 0.74
Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 5/109 (4%)
Frame = +2
Query: 155 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 334
+I+SSS D+T VW L+R G K + S I+ + L G +G+ D + +
Sbjct: 189 VIISSSEDRTCKVWSLSR-----GKLLKNIIFPS-VINALALDPGGCVFYAGARDSKIYI 242
Query: 335 WDLAA-----GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 466
+ A + + K + +A+ D ++SGS D + +W+
Sbjct: 243 GAINATSEYGTQVLGSVSEKGKAITCLAYCADGNLLISGSEDGVVCVWD 291
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 68.9 bits (161), Expect = 3e-12
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 2/202 (0%)
Frame = +2
Query: 83 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 262
++ TL GH+ VT + D++L++S DKT+ +W+ D NY L HS
Sbjct: 255 QILSTLTGHSKKVTSVKFVGD-SDLVLTASADKTVRIWRNPGD-GNYACGY-TLNDHSAE 311
Query: 263 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK--DVLSVAFSVDNRQIVSG 436
+ V + Y +S S D T +DL++G + D +K D + AF D + +G
Sbjct: 312 VRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTG 371
Query: 437 SRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCK 616
+ +K+W+ ++ + DGH+ V+ + FS N ++ + V++W L K
Sbjct: 372 TSQSVVKIWDVKSQAN-VAKFDGHTGEVTAISFS---ENGYFLATAAEDGVRLWDLR--K 425
Query: 617 LKINHLGHSGYLNTVTVSPDGS 682
L+ S N+V P GS
Sbjct: 426 LRNFKSFLSADANSVEFDPSGS 447
Score = 54.4 bits (125), Expect = 7e-08
Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Frame = +2
Query: 242 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLW------DLAAGKTTRRFEDHTKDVLSVA 403
L GHS ++ V D + L+ S DKT+R+W + A G T DH+ +V +V
Sbjct: 260 LTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYT---LNDHSAEVRAVT 316
Query: 404 FSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWD 580
N+ VS S D T ++ + C + DD + + F H + +I+ G
Sbjct: 317 VHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAF---HPDGLILGTGTS 373
Query: 581 RT-VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCAS 694
++ VK+W + + GH+G + ++ S +G A+
Sbjct: 374 QSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLAT 412
Score = 52.0 bits (119), Expect = 4e-07
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 6/149 (4%)
Frame = +2
Query: 269 DVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDK 448
D++ S D +G D T L+D +G+ H+K V SV F D+ +++ S DK
Sbjct: 229 DILHSKD--VIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADK 286
Query: 449 TIKLWNTLAE----CKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLT--N 610
T+++W + C YT+ D HS V V P N VS D T + L+ +
Sbjct: 287 TVRIWRNPGDGNYACGYTLND--HSAEVRAVTVHP--TNKYFVSASLDGTWCFYDLSSGS 342
Query: 611 CKLKINHLGHSGYLNTVTVSPDGSLCASG 697
C +++ + PDG + +G
Sbjct: 343 CLAQVSDDSKNVDYTAAAFHPDGLILGTG 371
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 68.9 bits (161), Expect = 3e-12
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 2/202 (0%)
Frame = +2
Query: 83 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 262
++ TL GH+ VT + D++L++S DKT+ +W+ D NY L HS
Sbjct: 255 QILSTLTGHSKKVTSVKFVGD-SDLVLTASADKTVRIWRNPGD-GNYACGY-TLNDHSAE 311
Query: 263 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK--DVLSVAFSVDNRQIVSG 436
+ V + Y +S S D T +DL++G + D +K D + AF D + +G
Sbjct: 312 VRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTG 371
Query: 437 SRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCK 616
+ +K+W+ ++ + DGH+ V+ + FS N ++ + V++W L K
Sbjct: 372 TSQSVVKIWDVKSQAN-VAKFDGHTGEVTAISFS---ENGYFLATAAEDGVRLWDLR--K 425
Query: 617 LKINHLGHSGYLNTVTVSPDGS 682
L+ S N+V P GS
Sbjct: 426 LRNFKSFLSADANSVEFDPSGS 447
Score = 54.4 bits (125), Expect = 7e-08
Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Frame = +2
Query: 242 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLW------DLAAGKTTRRFEDHTKDVLSVA 403
L GHS ++ V D + L+ S DKT+R+W + A G T DH+ +V +V
Sbjct: 260 LTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYT---LNDHSAEVRAVT 316
Query: 404 FSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWD 580
N+ VS S D T ++ + C + DD + + F H + +I+ G
Sbjct: 317 VHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAF---HPDGLILGTGTS 373
Query: 581 RT-VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCAS 694
++ VK+W + + GH+G + ++ S +G A+
Sbjct: 374 QSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLAT 412
Score = 52.0 bits (119), Expect = 4e-07
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 6/149 (4%)
Frame = +2
Query: 269 DVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDK 448
D++ S D +G D T L+D +G+ H+K V SV F D+ +++ S DK
Sbjct: 229 DILHSKD--VIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADK 286
Query: 449 TIKLWNTLAE----CKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLT--N 610
T+++W + C YT+ D HS V V P N VS D T + L+ +
Sbjct: 287 TVRIWRNPGDGNYACGYTLND--HSAEVRAVTVHP--TNKYFVSASLDGTWCFYDLSSGS 342
Query: 611 CKLKINHLGHSGYLNTVTVSPDGSLCASG 697
C +++ + PDG + +G
Sbjct: 343 CLAQVSDDSKNVDYTAAAFHPDGLILGTG 371
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 68.9 bits (161), Expect = 3e-12
Identities = 52/208 (25%), Positives = 97/208 (46%), Gaps = 4/208 (1%)
Frame = +2
Query: 83 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 262
+L T GH V+ I PK ++LS+ D + +W D N G + GH+
Sbjct: 273 RLVHTWSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIW----DVYNSGKCMRTYMGHAKA 328
Query: 263 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ--IVSG 436
+ D+ S+DG+ L+ +DK ++ WD G+ F + D++Q +++G
Sbjct: 329 VRDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAG 388
Query: 437 SRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCK 616
DK I W+ + + T + D H V+ + F N N V+ D++++VW
Sbjct: 389 MSDKKIVQWD-INTGEVTQEYDQHLGAVNTITFVDN--NRRFVTSSDDKSLRVWEF-GIP 444
Query: 617 LKINHLG--HSGYLNTVTVSPDGSLCAS 694
+ I ++ H + +++V P+G+ A+
Sbjct: 445 VVIKYISEPHMHSMPSISVHPNGNWLAA 472
Score = 53.6 bits (123), Expect = 1e-07
Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 6/141 (4%)
Frame = +2
Query: 293 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL 472
N L+G DK + WD+ G+ T+ ++ H V ++ F +NR+ V+ S DK++++W
Sbjct: 383 NILLAGMSDKKIVQWDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFG 442
Query: 473 AECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKIN----HLGH 640
+ H + + PN + + D + ++ T + ++N GH
Sbjct: 443 IPVVIKYISEPHMHSMPSISVHPN--GNWLAAQSLDNQILIYS-TRERFQLNKKKRFAGH 499
Query: 641 --SGYLNTVTVSPDGSLCASG 697
+GY V SPDG SG
Sbjct: 500 IVAGYACQVNFSPDGRFVMSG 520
Score = 41.5 bits (93), Expect = 5e-04
Identities = 38/154 (24%), Positives = 64/154 (41%), Gaps = 8/154 (5%)
Frame = +2
Query: 161 LSSSRDKTLIVWKLTRDENNYGIPQKRLY---GHSHFISDVVLSSDGNYALSGSWDKTLR 331
++SS DK+L VW+ +GIP Y H H + + + +GN+ + S D +
Sbjct: 428 VTSSDDKSLRVWE-------FGIPVVIKYISEPHMHSMPSISVHPNGNWLAAQSLDNQIL 480
Query: 332 LWDLAAG---KTTRRFEDHTKD--VLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQ 496
++ +RF H V FS D R ++SG + W+ + CK
Sbjct: 481 IYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKS-CKVFRT 539
Query: 497 DDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 598
H+ + P + + +CGWD +K W
Sbjct: 540 LKCHNGVCIGAEWHPLEQSKV-ATCGWDGLIKYW 572
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 68.5 bits (160), Expect = 4e-12
Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 5/143 (3%)
Frame = +2
Query: 152 DMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLR 331
+M+ S S+D + +W++ G+ +R HS ++ + S DG+ LS S+D+T R
Sbjct: 276 EMLASGSQDGKIKIWRIRT-----GVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTAR 330
Query: 332 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT-LAECKYTIQDD-- 502
+ L +GK + F HT V F+ D +I++ S D T+K+W++ +C T +
Sbjct: 331 IHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWDSKTTDCLQTFKPPPP 390
Query: 503 --GHSDWVSCVRFSPNHANPIIV 565
G V+ + P + I+V
Sbjct: 391 LRGTDASVNSIHLFPKNTEHIVV 413
Score = 64.9 bits (151), Expect = 5e-11
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 8/142 (5%)
Frame = +2
Query: 281 SSDGNYALSGSWDKTLRLWDLAAGKTTR--------RFEDHTKDVLSVAFSVDNRQIVSG 436
S DG + S S D + +WD +GK + F H VL + FS D+ + SG
Sbjct: 222 SPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLASG 281
Query: 437 SRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCK 616
S+D IK+W + D HS V+ + FS + + ++S +D+T ++ L + K
Sbjct: 282 SQDGKIKIWRIRTGVCIR-RFDAHSQGVTSLSFSRDGSQ--LLSTSFDQTARIHGLKSGK 338
Query: 617 LKINHLGHSGYLNTVTVSPDGS 682
L GH+ Y+N + DGS
Sbjct: 339 LLKEFRGHTSYVNHAIFTSDGS 360
Score = 62.1 bits (144), Expect = 3e-10
Identities = 46/152 (30%), Positives = 77/152 (50%), Gaps = 5/152 (3%)
Frame = +2
Query: 158 ILSSSRDKTLIVW-----KLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDK 322
+ SSS D + VW KL +D Y + + H + + S D SGS D
Sbjct: 228 LASSSVDGFIEVWDYISGKLKKDLQ-YQADESFMM-HDDPVLCIDFSRDSEMLASGSQDG 285
Query: 323 TLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDD 502
+++W + G RRF+ H++ V S++FS D Q++S S D+T ++ + L K +
Sbjct: 286 KIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARI-HGLKSGKLLKEFR 344
Query: 503 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 598
GH+ +V+ F+ + + I++ D TVKVW
Sbjct: 345 GHTSYVNHAIFTSDGSR--IITASSDCTVKVW 374
Score = 33.1 bits (72), Expect = 0.18
Identities = 31/130 (23%), Positives = 53/130 (40%)
Frame = +2
Query: 74 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 253
+T K LRG + V I PK + I+ ++ ++ + L R G
Sbjct: 383 QTFKPPPPLRGTDASVNSIHLFPKNTEHIVVCNKTSSIYIMTLQGQVVKSFSSGNREGGD 442
Query: 254 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 433
F++ V S+ G++ DK L ++ +G H KDV+ + + +
Sbjct: 443 --FVAACV-STKGDWIYCIGEDKKLYCFNYQSGGLEHFMMVHEKDVIGITHHPHRNLLAT 499
Query: 434 GSRDKTIKLW 463
S D T+KLW
Sbjct: 500 YSEDCTMKLW 509
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 68.5 bits (160), Expect = 4e-12
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 2/166 (1%)
Frame = +2
Query: 107 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS- 283
H V + NP D L+SS D T+ +W + R + + H++ + V +
Sbjct: 105 HAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPAS-----VRTFKEHAYCVYQAVWNP 159
Query: 284 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKL 460
G+ S S D TLR+WD+ +T H ++LS ++ D+ + + S DKT+K+
Sbjct: 160 KHGDVFASASGDCTLRIWDVREPGSTMIIPAHDFEILSCDWNKYDDCILATSSVDKTVKV 219
Query: 461 WNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 598
W+ + +GH V V+FSP H +I SC +D +V +W
Sbjct: 220 WDVRSYRVPLAVLNGHGYAVRKVKFSP-HRRSLIASCSYDMSVCLW 264
Score = 58.4 bits (135), Expect = 4e-09
Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 2/170 (1%)
Frame = +2
Query: 95 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 274
T + H V Q NPK+ D+ S+S D TL +W + + IP +S
Sbjct: 144 TFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIPAHDF----EILSCD 199
Query: 275 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRR-FEDHTKDVLSVAFSVDNRQIV-SGSRDK 448
D + S DKT+++WD+ + + H V V FS R ++ S S D
Sbjct: 200 WNKYDDCILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDM 259
Query: 449 TIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 598
++ LW+ + E + D H+++ + S ++ S GWD V VW
Sbjct: 260 SVCLWDYMVEDALVGRYDHHTEFAVGIDMSV-LVEGLMASTGWDELVYVW 308
Score = 49.2 bits (112), Expect = 3e-06
Identities = 36/134 (26%), Positives = 67/134 (50%), Gaps = 3/134 (2%)
Frame = +2
Query: 302 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI-VSGSRDKTIKLWNTLAE 478
L+ SWD T++LW + + R F++H V ++ + + S S D T+++W+ + E
Sbjct: 123 LTSSWDDTVKLWAMDRPASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWD-VRE 181
Query: 479 CKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGY-LN 655
T+ H + ++ + + I+ + D+TVKVW + + ++ + L GY +
Sbjct: 182 PGSTMIIPAHDFEILSCDWN-KYDDCILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVR 240
Query: 656 TVTVSPD-GSLCAS 694
V SP SL AS
Sbjct: 241 KVKFSPHRRSLIAS 254
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 67.7 bits (158), Expect = 7e-12
Identities = 40/124 (32%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Frame = +2
Query: 326 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDD 502
++LWD G RF++H V V F VSG D IK+WN C +T+
Sbjct: 33 IQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLL-- 90
Query: 503 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 682
GH D++ V+F +H NP IVS D+T+++W+ + GH+ Y+ + P
Sbjct: 91 GHLDYIRTVQF--HHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKED 148
Query: 683 LCAS 694
L S
Sbjct: 149 LVVS 152
Score = 59.7 bits (138), Expect = 2e-09
Identities = 44/168 (26%), Positives = 75/168 (44%)
Frame = +2
Query: 119 VTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNY 298
V ++ +PK P IL+S + +W + G R H + V +
Sbjct: 12 VKGLSFHPKRP-WILASLHSGVIQLW-----DYRMGTLIDRFDEHEGPVRGVHFHNSQPL 65
Query: 299 ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 478
+SG D +++W+ + H + +V F +N IVS S D+TI++WN +
Sbjct: 66 FVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSR 125
Query: 479 CKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLK 622
++ GH+ +V C F P ++VS D+TV+VW + K K
Sbjct: 126 TCISVL-TGHNHYVMCASFHPK--EDLVVSASLDQTVRVWDIGALKKK 170
Score = 51.6 bits (118), Expect = 5e-07
Identities = 51/191 (26%), Positives = 89/191 (46%), Gaps = 2/191 (1%)
Frame = +2
Query: 95 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 274
TL GH ++ + + + P I+S+S D+T+ +W + + L GH+H++
Sbjct: 88 TLLGHLDYIRTVQFHHENP-WIVSASDDQTIRIWNW-QSRTCISV----LTGHNHYVMCA 141
Query: 275 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 454
+ +S S D+T+R+WD+ A K ++ D++ FS N + G
Sbjct: 142 SFHPKEDLVVSASLDQTVRVWDIGALK--KKSASPADDLMR--FSQMNSDLFGGVD---- 193
Query: 455 KLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKL-KINH 631
A KY ++ GH V+ F P P+IVS DR VK+W + K +++
Sbjct: 194 ------AIVKYVLE--GHDRGVNWASFHPTL--PLIVSGADDRQVKLWRMNETKAWEVDT 243
Query: 632 L-GHSGYLNTV 661
L GH +++V
Sbjct: 244 LRGHMNNVSSV 254
Score = 47.6 bits (108), Expect = 8e-06
Identities = 53/173 (30%), Positives = 77/173 (44%), Gaps = 3/173 (1%)
Frame = +2
Query: 98 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 277
L GHN +V + +PK D+++S+S D+T+ VW + + P L S SD
Sbjct: 131 LTGHNHYVMCASFHPK-EDLVVSASLDQTVRVWDIGALKKKSASPADDLMRFSQMNSD-- 187
Query: 278 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 457
L G D ++ E H + V +F IVSG+ D+ +K
Sbjct: 188 --------LFGGVDAIVKYV----------LEGHDRGVNWASFHPTLPLIVSGADDRQVK 229
Query: 458 LWNTLAECKYTIQDD--GHSDWVSCVRFSPNHA-NPIIVSCGWDRTVKVWHLT 607
LW + E K D GH + VS V F HA IIVS D++++VW T
Sbjct: 230 LWR-MNETKAWEVDTLRGHMNNVSSVMF---HAKQDIIVSNSEDKSIRVWDAT 278
Score = 33.5 bits (73), Expect = 0.14
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +2
Query: 65 KMSETLKLR-GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 208
+M+ET TLRGH V+ + + K D+I+S+S DK++ VW T+
Sbjct: 232 RMNETKAWEVDTLRGHMNNVSSVMFHAKQ-DIIVSNSEDKSIRVWDATK 279
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 785
Score = 66.5 bits (155), Expect = 2e-11
Identities = 47/183 (25%), Positives = 88/183 (48%), Gaps = 3/183 (1%)
Frame = +2
Query: 155 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 334
++ S+ DK + +W + + P++ H+H I+DV + + S+DKT+++
Sbjct: 522 LLASAGHDKKVFIWNMETLQVE-STPEE----HAHIITDVRFRPNSTQLATSSFDKTIKI 576
Query: 335 WDLA-AGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIKLWNTLAECKYTIQDDGH 508
WD + G R H V+S+ F +++ S + I+ W+ A C ++ G
Sbjct: 577 WDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVRAVK--GA 634
Query: 509 SDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKIN-HLGHSGYLNTVTVSPDGSL 685
S + VRF P ++ + TV ++ + N ++N GHS +++V SP+G L
Sbjct: 635 S---TQVRFQPRTGQ--FLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGEL 689
Query: 686 CAS 694
AS
Sbjct: 690 VAS 692
Score = 52.8 bits (121), Expect = 2e-07
Identities = 40/167 (23%), Positives = 73/167 (43%)
Frame = +2
Query: 98 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 277
+R G TQ+ P+ L+++ + T+ ++ + + I GHS + V
Sbjct: 628 VRAVKGASTQVRFQPR-TGQFLAAASENTVSIFDIENNNKRVNI----FKGHSSNVHSVC 682
Query: 278 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 457
S +G S S D ++LW L++G + SV F ++ + I+
Sbjct: 683 WSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIE 741
Query: 458 LWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 598
LWNT+ T+ GH +S + SP + ++ S D++VK+W
Sbjct: 742 LWNTMENKCMTVA--GHECVISALAQSP--STGVVASASHDKSVKIW 784
Score = 52.0 bits (119), Expect = 4e-07
Identities = 27/108 (25%), Positives = 49/108 (45%)
Frame = +2
Query: 281 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 460
S DG S DK + +W++ + E+H + V F ++ Q+ + S DKTIK+
Sbjct: 517 SYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKI 576
Query: 461 WNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 604
W+ + GH+ V + F P ++ SC + ++ W +
Sbjct: 577 WDASDPGYFLRTISGHAAPVMSIDFHPKKTE-LLCSCDSNNDIRFWDI 623
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 66.5 bits (155), Expect = 2e-11
Identities = 47/183 (25%), Positives = 88/183 (48%), Gaps = 3/183 (1%)
Frame = +2
Query: 155 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 334
++ S+ DK + +W + + P++ H+H I+DV + + S+DKT+++
Sbjct: 524 LLASAGHDKKVFIWNMETLQVE-STPEE----HAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 335 WDLA-AGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIKLWNTLAECKYTIQDDGH 508
WD + G R H V+S+ F +++ S + I+ W+ A C ++ G
Sbjct: 579 WDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVRAVK--GA 636
Query: 509 SDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKIN-HLGHSGYLNTVTVSPDGSL 685
S + VRF P ++ + TV ++ + N ++N GHS +++V SP+G L
Sbjct: 637 S---TQVRFQPRTGQ--FLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGEL 691
Query: 686 CAS 694
AS
Sbjct: 692 VAS 694
Score = 52.8 bits (121), Expect = 2e-07
Identities = 40/167 (23%), Positives = 73/167 (43%)
Frame = +2
Query: 98 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 277
+R G TQ+ P+ L+++ + T+ ++ + + I GHS + V
Sbjct: 630 VRAVKGASTQVRFQPR-TGQFLAAASENTVSIFDIENNNKRVNI----FKGHSSNVHSVC 684
Query: 278 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 457
S +G S S D ++LW L++G + SV F ++ + I+
Sbjct: 685 WSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIE 743
Query: 458 LWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 598
LWNT+ T+ GH +S + SP + ++ S D++VK+W
Sbjct: 744 LWNTMENKCMTVA--GHECVISALAQSP--STGVVASASHDKSVKIW 786
Score = 52.0 bits (119), Expect = 4e-07
Identities = 27/108 (25%), Positives = 49/108 (45%)
Frame = +2
Query: 281 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 460
S DG S DK + +W++ + E+H + V F ++ Q+ + S DKTIK+
Sbjct: 519 SYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 461 WNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 604
W+ + GH+ V + F P ++ SC + ++ W +
Sbjct: 579 WDASDPGYFLRTISGHAAPVMSIDFHPKKTE-LLCSCDSNNDIRFWDI 625
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 66.5 bits (155), Expect = 2e-11
Identities = 47/183 (25%), Positives = 88/183 (48%), Gaps = 3/183 (1%)
Frame = +2
Query: 155 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 334
++ S+ DK + +W + + P++ H+H I+DV + + S+DKT+++
Sbjct: 524 LLASAGHDKKVFIWNMETLQVE-STPEE----HAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 335 WDLA-AGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIKLWNTLAECKYTIQDDGH 508
WD + G R H V+S+ F +++ S + I+ W+ A C ++ G
Sbjct: 579 WDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVRAVK--GA 636
Query: 509 SDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKIN-HLGHSGYLNTVTVSPDGSL 685
S + VRF P ++ + TV ++ + N ++N GHS +++V SP+G L
Sbjct: 637 S---TQVRFQPRTGQ--FLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGEL 691
Query: 686 CAS 694
AS
Sbjct: 692 VAS 694
Score = 52.8 bits (121), Expect = 2e-07
Identities = 40/167 (23%), Positives = 73/167 (43%)
Frame = +2
Query: 98 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 277
+R G TQ+ P+ L+++ + T+ ++ + + I GHS + V
Sbjct: 630 VRAVKGASTQVRFQPR-TGQFLAAASENTVSIFDIENNNKRVNI----FKGHSSNVHSVC 684
Query: 278 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 457
S +G S S D ++LW L++G + SV F ++ + I+
Sbjct: 685 WSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIE 743
Query: 458 LWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 598
LWNT+ T+ GH +S + SP + ++ S D++VK+W
Sbjct: 744 LWNTMENKCMTVA--GHECVISALAQSP--STGVVASASHDKSVKIW 786
Score = 52.0 bits (119), Expect = 4e-07
Identities = 27/108 (25%), Positives = 49/108 (45%)
Frame = +2
Query: 281 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 460
S DG S DK + +W++ + E+H + V F ++ Q+ + S DKTIK+
Sbjct: 519 SYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 461 WNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 604
W+ + GH+ V + F P ++ SC + ++ W +
Sbjct: 579 WDASDPGYFLRTISGHAAPVMSIDFHPKKTE-LLCSCDSNNDIRFWDI 625
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 66.5 bits (155), Expect = 2e-11
Identities = 47/183 (25%), Positives = 88/183 (48%), Gaps = 3/183 (1%)
Frame = +2
Query: 155 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 334
++ S+ DK + +W + + P++ H+H I+DV + + S+DKT+++
Sbjct: 524 LLASAGHDKKVFIWNMETLQVE-STPEE----HAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 335 WDLA-AGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIKLWNTLAECKYTIQDDGH 508
WD + G R H V+S+ F +++ S + I+ W+ A C ++ G
Sbjct: 579 WDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVRAVK--GA 636
Query: 509 SDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKIN-HLGHSGYLNTVTVSPDGSL 685
S + VRF P ++ + TV ++ + N ++N GHS +++V SP+G L
Sbjct: 637 S---TQVRFQPRTGQ--FLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGEL 691
Query: 686 CAS 694
AS
Sbjct: 692 VAS 694
Score = 52.8 bits (121), Expect = 2e-07
Identities = 40/167 (23%), Positives = 73/167 (43%)
Frame = +2
Query: 98 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 277
+R G TQ+ P+ L+++ + T+ ++ + + I GHS + V
Sbjct: 630 VRAVKGASTQVRFQPR-TGQFLAAASENTVSIFDIENNNKRVNI----FKGHSSNVHSVC 684
Query: 278 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 457
S +G S S D ++LW L++G + SV F ++ + I+
Sbjct: 685 WSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIE 743
Query: 458 LWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 598
LWNT+ T+ GH +S + SP + ++ S D++VK+W
Sbjct: 744 LWNTMENKCMTVA--GHECVISALAQSP--STGVVASASHDKSVKIW 786
Score = 52.0 bits (119), Expect = 4e-07
Identities = 27/108 (25%), Positives = 49/108 (45%)
Frame = +2
Query: 281 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 460
S DG S DK + +W++ + E+H + V F ++ Q+ + S DKTIK+
Sbjct: 519 SYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 461 WNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 604
W+ + GH+ V + F P ++ SC + ++ W +
Sbjct: 579 WDASDPGYFLRTISGHAAPVMSIDFHPKKTE-LLCSCDSNNDIRFWDI 625
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 66.5 bits (155), Expect = 2e-11
Identities = 47/183 (25%), Positives = 88/183 (48%), Gaps = 3/183 (1%)
Frame = +2
Query: 155 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 334
++ S+ DK + +W + + P++ H+H I+DV + + S+DKT+++
Sbjct: 524 LLASAGHDKKVFIWNMETLQVE-STPEE----HAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 335 WDLA-AGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIKLWNTLAECKYTIQDDGH 508
WD + G R H V+S+ F +++ S + I+ W+ A C ++ G
Sbjct: 579 WDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVRAVK--GA 636
Query: 509 SDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKIN-HLGHSGYLNTVTVSPDGSL 685
S + VRF P ++ + TV ++ + N ++N GHS +++V SP+G L
Sbjct: 637 S---TQVRFQPRTGQ--FLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGEL 691
Query: 686 CAS 694
AS
Sbjct: 692 VAS 694
Score = 52.8 bits (121), Expect = 2e-07
Identities = 40/167 (23%), Positives = 73/167 (43%)
Frame = +2
Query: 98 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 277
+R G TQ+ P+ L+++ + T+ ++ + + I GHS + V
Sbjct: 630 VRAVKGASTQVRFQPR-TGQFLAAASENTVSIFDIENNNKRVNI----FKGHSSNVHSVC 684
Query: 278 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 457
S +G S S D ++LW L++G + SV F ++ + I+
Sbjct: 685 WSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIE 743
Query: 458 LWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 598
LWNT+ T+ GH +S + SP + ++ S D++VK+W
Sbjct: 744 LWNTMENKCMTVA--GHECVISALAQSP--STGVVASASHDKSVKIW 786
Score = 52.0 bits (119), Expect = 4e-07
Identities = 27/108 (25%), Positives = 49/108 (45%)
Frame = +2
Query: 281 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 460
S DG S DK + +W++ + E+H + V F ++ Q+ + S DKTIK+
Sbjct: 519 SYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKI 578
Query: 461 WNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 604
W+ + GH+ V + F P ++ SC + ++ W +
Sbjct: 579 WDASDPGYFLRTISGHAAPVMSIDFHPKKTE-LLCSCDSNNDIRFWDI 625
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 66.1 bits (154), Expect = 2e-11
Identities = 56/212 (26%), Positives = 97/212 (45%), Gaps = 7/212 (3%)
Frame = +2
Query: 83 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 262
+L TL H G + + N K D +L+ S D+T +VW + +E +++ HS
Sbjct: 356 ELISTLSKHKGPIFSLKWNKK-GDYLLTGSVDRTAVVWDVKAEEW-----KQQFEFHSGP 409
Query: 263 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 442
DV ++ ++A S S D + L + + + F H +V V + + S S
Sbjct: 410 TLDVDWRNNVSFATS-STDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSD 468
Query: 443 DKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP-----NHANP--IIVSCGWDRTVKVWH 601
D T K+WN + + + H+ + +R+SP N+ N + S +D TVK+W
Sbjct: 469 DSTAKIWN-IKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWD 527
Query: 602 LTNCKLKINHLGHSGYLNTVTVSPDGSLCASG 697
K+ + GH + ++ SP+G ASG
Sbjct: 528 AELGKMLCSFNGHREPVYSLAFSPNGEYIASG 559
Score = 58.8 bits (136), Expect = 3e-09
Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 4/138 (2%)
Frame = +2
Query: 65 KMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ--K 238
K+ ET + T GH G V + +P ++ S S D T +W + + + + + K
Sbjct: 434 KIGETRPAK-TFTGHQGEVNCVKWDPT-GSLLASCSDDSTAKIWNIKQSTFVHDLREHTK 491
Query: 239 RLYGHSHFISDVVLSSDGNYAL--SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 412
+Y + ++ S S+D T++LWD GK F H + V S+AFS
Sbjct: 492 EIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSP 551
Query: 413 DNRQIVSGSRDKTIKLWN 466
+ I SGS DK+I +W+
Sbjct: 552 NGEYIASGSLDKSIHIWS 569
Score = 51.2 bits (117), Expect = 6e-07
Identities = 57/217 (26%), Positives = 88/217 (40%), Gaps = 18/217 (8%)
Frame = +2
Query: 98 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDE--------NNYGIPQKRLYGH 253
L GH V A +P ++ S S D T +W + N + K G
Sbjct: 261 LEGHTSEVCACAWSPS-ASLLASGSGDATARIWSIPEGSFKAVHTGRNINALILKHAKGK 319
Query: 254 SHFISDVVLSSD----GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 421
S+ S V + D G +GS D R+W L G+ H + S+ ++
Sbjct: 320 SNEKSKDVTTLDWNGEGTLLATGSCDGQARIWTLN-GELISTLSKHKGPIFSLKWNKKGD 378
Query: 422 QIVSGSRDKTIKLWNTLAECKYTIQDDGHS------DWVSCVRFSPNHANPIIVSCGWDR 583
+++GS D+T +W+ AE ++ Q + HS DW + V F+ + + +I C
Sbjct: 379 YLLTGSVDRTAVVWDVKAE-EWKQQFEFHSGPTLDVDWRNNVSFATSSTDSMIYLC---- 433
Query: 584 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCAS 694
K+ K GH G +N V P GSL AS
Sbjct: 434 --KIGETRPAK---TFTGHQGEVNCVKWDPTGSLLAS 465
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/106 (22%), Positives = 47/106 (44%)
Frame = +2
Query: 137 NPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSW 316
NP + S+S D T+ +W + G GH + + S +G Y SGS
Sbjct: 507 NPNKQLTLASASFDSTVKLW-----DAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSL 561
Query: 317 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 454
DK++ +W + GK + + + + V ++ + +I + D ++
Sbjct: 562 DKSIHIWSIKEGKIVKTYTGN-GGIFEVCWNKEGNKIAACFADNSV 606
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 362 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 466
R E HT +V + A+S + SGS D T ++W+
Sbjct: 259 RILEGHTSEVCACAWSPSASLLASGSGDATARIWS 293
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 66.1 bits (154), Expect = 2e-11
Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 3/179 (1%)
Frame = +2
Query: 146 YPDM--ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWD 319
YPD I++ D+++ +W L E Q+ + +SD+ ++ DG + +S D
Sbjct: 370 YPDGQGIIAGMTDRSICMWDLDGREKECWKGQR-----TQKVSDIAMTDDGKWLVSVCKD 424
Query: 320 KTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD 499
+ L+D A T R + + S + S DN+ I+ ++ I+LWN + K +
Sbjct: 425 SVISLFDREA--TVERLIEEEDMITSFSLSNDNKYILVNLLNQEIRLWNIEGDPKIVSRY 482
Query: 500 DGHSDWVSCVRFS-PNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP 673
GH +R + I S D V +WH + KL + GH+G +N V+ SP
Sbjct: 483 KGHKRSRFIIRSCFGGYKQAFIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSP 541
Score = 57.6 bits (133), Expect = 7e-09
Identities = 33/118 (27%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
Frame = +2
Query: 116 WVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKR-LYGHSHFISDVVLSSDG 292
W Q + N KY + SSS+D+T I+W+++ D + I K L GH + ++ S D
Sbjct: 278 WFLQFSHNGKY---LASSSKDQTAIIWEISADGH---ISLKHTLVGHHKPVIAILWSPDD 331
Query: 293 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 466
L+ ++ +R WD+ +G +E +S + D + I++G D++I +W+
Sbjct: 332 RQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISPISCGWYPDGQGIIAGMTDRSICMWD 389
Score = 55.2 bits (127), Expect = 4e-08
Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 4/127 (3%)
Frame = +2
Query: 236 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKD---VLSVA 403
+RL I+ LS+D Y L ++ +RLW++ K R++ H + + S
Sbjct: 437 ERLIEEEDMITSFSLSNDNKYILVNLLNQEIRLWNIEGDPKIVSRYKGHKRSRFIIRSCF 496
Query: 404 FSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDR 583
I SGS D + +W+ + K ++ GH+ V+CV +SP + + ++ S D
Sbjct: 497 GGYKQAFIASGSEDSQVYIWHR-STGKLIVELPGHAGAVNCVSWSPTNLH-MLASASDDG 554
Query: 584 TVKVWHL 604
T+++W L
Sbjct: 555 TIRIWGL 561
Score = 46.0 bits (104), Expect = 2e-05
Identities = 30/125 (24%), Positives = 61/125 (48%), Gaps = 4/125 (3%)
Frame = +2
Query: 242 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAG---KTTRRFEDHTKDVLSVAFSV 412
L H+ + + S +G Y S S D+T +W+++A H K V+++ +S
Sbjct: 270 LESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWSP 329
Query: 413 DNRQIVSGSRDKTIKLWNT-LAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTV 589
D+RQ+++ ++ I+ W+ +C + + G S +SC + I++ DR++
Sbjct: 330 DDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISP-ISCGWYPDGQG---IIAGMTDRSI 385
Query: 590 KVWHL 604
+W L
Sbjct: 386 CMWDL 390
Score = 42.3 bits (95), Expect = 3e-04
Identities = 27/119 (22%), Positives = 58/119 (48%), Gaps = 4/119 (3%)
Frame = +2
Query: 353 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDD--GHSDWVSC 526
+T + E HT +V + FS + + + S S+D+T +W A+ +++ GH V
Sbjct: 265 QTAQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIA 324
Query: 527 VRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVS--PDGSLCASG 697
+ +SP+ +++CG + ++ W + + H+ G ++ ++ PDG +G
Sbjct: 325 ILWSPDDRQ--VLTCGAEEVIRRWDVDSGDCV--HMYEKGGISPISCGWYPDGQGIIAG 379
Score = 30.7 bits (66), Expect = 0.98
Identities = 24/73 (32%), Positives = 36/73 (49%)
Frame = +2
Query: 77 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 256
T KL L GH G V ++ +P M+ S+S D T+ +W L R N +K + G S
Sbjct: 520 TGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGLDR-INQQNQKKKLVQGSS 578
Query: 257 HFISDVVLSSDGN 295
+ V+ +GN
Sbjct: 579 S--NGVIHRCNGN 589
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 64.1 bits (149), Expect = 9e-11
Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Frame = +2
Query: 236 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 415
KRL GH + + +L G Y ++GS D+ +++W + H D+ +A S +
Sbjct: 239 KRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSN 298
Query: 416 NRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPI-IVSCGWDRTVK 592
N I S S D I++W ++ GH+ V+ + FSP +P ++S D T +
Sbjct: 299 NIFIASASNDCVIRVWRLPDGLPVSVL-RGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCR 357
Query: 593 VW 598
+W
Sbjct: 358 IW 359
Score = 33.9 bits (74), Expect = 0.10
Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +2
Query: 98 LRGHNGWVTQIATNPK--YPDMILSSSRDKTLIVW 196
LRGH G VT IA +P+ P +LSSS D T +W
Sbjct: 325 LRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIW 359
Score = 31.5 bits (68), Expect = 0.56
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 2/113 (1%)
Frame = +2
Query: 350 GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCV 529
G +R + V +A+S+DNR +++ D I +WN ++ GH+ S
Sbjct: 534 GGPRQRILPTPRGVNMIAWSLDNRFVLAAIMDCRICVWNA-SDGSLVHSLTGHT--ASTY 590
Query: 530 RFSPNHANP-IIVSCGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGS 682
+ NP I +S G+D VW + ++I + H ++ SPDG+
Sbjct: 591 VMDVHPFNPRIAMSAGYDGKTIVWDIWEGIPIQIYDISHYKLVDG-KFSPDGT 642
Score = 29.9 bits (64), Expect = 1.7
Identities = 26/115 (22%), Positives = 47/115 (40%), Gaps = 2/115 (1%)
Frame = +2
Query: 224 GIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 403
G P++R+ ++ + S D + L+ D + +W+ + G HT +
Sbjct: 534 GGPRQRILPTPRGVNMIAWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTASTYVMD 593
Query: 404 FSVDNRQIV--SGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPII 562
N +I +G KTI +W+ I D H V +FSP+ + I+
Sbjct: 594 VHPFNPRIAMSAGYDGKTI-VWDIWEGIPIQIYDISHYKLVD-GKFSPDGTSIIL 646
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = +2
Query: 503 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 682
GH + V C + + +++ DR VKVW + + GH G + + VS +
Sbjct: 243 GHRNAVYCAIL--DRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNNI 300
Query: 683 LCAS 694
AS
Sbjct: 301 FIAS 304
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 64.1 bits (149), Expect = 9e-11
Identities = 37/119 (31%), Positives = 59/119 (49%)
Frame = +2
Query: 107 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS 286
H G VT + N K M+ S S+D +I+W + + + RL GH ++D+V
Sbjct: 105 HKGAVTALRYN-KVGSMLASGSKDNDIILWDVVGESGLF-----RLRGHRDQVTDLVFLD 158
Query: 287 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 463
G +S S DK LR+WDL + H +V SV + R +V+GS D+ ++ +
Sbjct: 159 GGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEERYVVTGSADQELRFY 217
Score = 59.3 bits (137), Expect = 2e-09
Identities = 32/119 (26%), Positives = 60/119 (50%)
Frame = +2
Query: 242 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 421
LYGH + + +SSDG ++GS DK L++W L G + H V+ V F +
Sbjct: 578 LYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTH 637
Query: 422 QIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 598
+ S +D+ +K W+ + ++ + +GH + C+ S + +V+ DR+++ W
Sbjct: 638 YLFSIGKDRLVKYWDA-DKFEHLLTLEGHHAEIWCLAIS--NRGDFLVTGSHDRSMRRW 693
Score = 53.2 bits (122), Expect = 2e-07
Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 1/143 (0%)
Frame = +2
Query: 272 VVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKT 451
V +S D + D T++++ + + K H V+ + S D IV+GS+DK
Sbjct: 546 VAISPDAKHIAVALLDSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKN 605
Query: 452 IKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKIN 628
+K+W +C +I H D V V+F N + S G DR VK W + +
Sbjct: 606 LKIWGLDFGDCHKSI--FAHGDSVMGVKFVRN--THYLFSIGKDRLVKYWDADKFEHLLT 661
Query: 629 HLGHSGYLNTVTVSPDGSLCASG 697
GH + + +S G +G
Sbjct: 662 LEGHHAEIWCLAISNRGDFLVTG 684
Score = 48.8 bits (111), Expect = 3e-06
Identities = 33/135 (24%), Positives = 64/135 (47%)
Frame = +2
Query: 74 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 253
++LK +L GH V I + ++I++ S+DK L +W L ++G K ++ H
Sbjct: 570 DSLKFYLSLYGHKLPVMCIDISSD-GELIVTGSQDKNLKIWGL-----DFGDCHKSIFAH 623
Query: 254 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 433
+ V + +Y S D+ ++ WD + E H ++ +A S +V+
Sbjct: 624 GDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLVT 683
Query: 434 GSRDKTIKLWNTLAE 478
GS D++++ W+ E
Sbjct: 684 GSHDRSMRRWDRSEE 698
Score = 45.6 bits (103), Expect = 3e-05
Identities = 33/148 (22%), Positives = 63/148 (42%)
Frame = +2
Query: 71 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 250
S+TL + G + VT IA++ ++ D ++ +W + G +
Sbjct: 52 SKTLTPSSSRGGPSLAVTSIASSAS--SLVAVGYADGSIRIW-----DTEKGTCEVNFNS 104
Query: 251 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 430
H ++ + + G+ SGS D + LWD+ R H V + F +++V
Sbjct: 105 HKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLV 164
Query: 431 SGSRDKTIKLWNTLAECKYTIQDDGHSD 514
S S+DK +++W+ + I HS+
Sbjct: 165 SSSKDKFLRVWDLETQHCMQIVSGHHSE 192
Score = 37.1 bits (82), Expect = 0.011
Identities = 23/73 (31%), Positives = 38/73 (52%)
Frame = +2
Query: 386 DVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIV 565
DVL+VA S D + I D T+K++ + K+ + GH V C+ S + +IV
Sbjct: 542 DVLAVAISPDAKHIAVALLDSTVKVF-YMDSLKFYLSLYGHKLPVMCIDISSD--GELIV 598
Query: 566 SCGWDRTVKVWHL 604
+ D+ +K+W L
Sbjct: 599 TGSQDKNLKIWGL 611
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/103 (18%), Positives = 46/103 (44%), Gaps = 2/103 (1%)
Frame = +2
Query: 395 SVAFSVDNRQIVSGSRDKTIKLWNTL-AECKYTIQDDGHSDWVSCVRFSPNHANPIIVSC 571
++A+ + +++ + +K + +W+ C T+ S S + +V+
Sbjct: 23 NIAYDSTGKYVLAPALEK-VGIWHVRQGVCSKTLTPSSSRGGPSLAVTSIASSASSLVAV 81
Query: 572 GW-DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASG 697
G+ D ++++W ++N H G + + + GS+ ASG
Sbjct: 82 GYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASG 124
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 64.1 bits (149), Expect = 9e-11
Identities = 39/124 (31%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
Frame = +2
Query: 326 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDD 502
++LWD G RF++H V V F VSG D IK+WN C +T+
Sbjct: 33 IQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLL-- 90
Query: 503 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 682
GH D++ V+F +H P IVS D+T+++W+ + GH+ Y+ + P
Sbjct: 91 GHLDYIRTVQF--HHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKED 148
Query: 683 LCAS 694
L S
Sbjct: 149 LVVS 152
Score = 54.4 bits (125), Expect = 7e-08
Identities = 41/162 (25%), Positives = 72/162 (44%)
Frame = +2
Query: 119 VTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNY 298
V ++ +PK P IL+S + +W + G R H + V +
Sbjct: 12 VKGLSFHPKRP-WILASLHSGVIQLW-----DYRMGTLIDRFDEHEGPVRGVHFHNSQPL 65
Query: 299 ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 478
+SG D +++W+ + H + +V F + IVS S D+TI++WN +
Sbjct: 66 FVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSR 125
Query: 479 CKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 604
++ GH+ +V C F P ++VS D+TV+VW +
Sbjct: 126 TCVSVL-TGHNHYVMCASFHPK--EDLVVSASLDQTVRVWDI 164
Score = 50.0 bits (114), Expect = 1e-06
Identities = 60/204 (29%), Positives = 94/204 (46%), Gaps = 4/204 (1%)
Frame = +2
Query: 98 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 277
L GHN +V + +PK D+++S+S D+T+ VW + G +K+ + D++
Sbjct: 131 LTGHNHYVMCASFHPK-EDLVVSASLDQTVRVWDI-------GALRKKTVSPA---DDIM 179
Query: 278 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 457
+ N L G D ++ E H + V AF IVSG+ D+ +K
Sbjct: 180 RLTQMNSDLFGGVDAIVKYV----------LEGHDRGVNWAAFHPTLPLIVSGADDRQVK 229
Query: 458 LWNTLAECKYTIQDD--GHSDWVSCVRFSPNHANP-IIVSCGWDRTVKVWHLT-NCKLKI 625
LW + E K D GH + VS V F HA IIVS D++++VW T L+
Sbjct: 230 LWR-MNETKAWEVDTLRGHMNNVSSVMF---HAKQDIIVSNSEDKSIRVWDATKRTGLQT 285
Query: 626 NHLGHSGYLNTVTVSPDGSLCASG 697
H + + V P+ +L A+G
Sbjct: 286 FRREHDRFW-ILAVHPEMNLLAAG 308
Score = 44.8 bits (101), Expect = 6e-05
Identities = 44/168 (26%), Positives = 72/168 (42%), Gaps = 28/168 (16%)
Frame = +2
Query: 242 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 421
L GH +I V + + +S S D+T+R+W+ + H V+ +F
Sbjct: 89 LLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKED 148
Query: 422 QIVSGSRDKTIKLWNTLAECKYTIQ--DD------------------------GHSDWVS 523
+VS S D+T+++W+ A K T+ DD GH V+
Sbjct: 149 LVVSASLDQTVRVWDIGALRKKTVSPADDIMRLTQMNSDLFGGVDAIVKYVLEGHDRGVN 208
Query: 524 CVRFSPNHANPIIVSCGWDRTVKVWHLTNCKL-KINHL-GHSGYLNTV 661
F P P+IVS DR VK+W + K +++ L GH +++V
Sbjct: 209 WAAFHP--TLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSV 254
Score = 33.5 bits (73), Expect = 0.14
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +2
Query: 65 KMSETLKLR-GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 208
+M+ET TLRGH V+ + + K D+I+S+S DK++ VW T+
Sbjct: 232 RMNETKAWEVDTLRGHMNNVSSVMFHAKQ-DIIVSNSEDKSIRVWDATK 279
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 63.7 bits (148), Expect = 1e-10
Identities = 44/183 (24%), Positives = 85/183 (46%), Gaps = 2/183 (1%)
Frame = +2
Query: 158 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 337
+ + +D+ + +W + N G K LYG I D+ ++ D ++ + L +W
Sbjct: 246 LFTGGQDRAVKMW-----DTNSGTLIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVW 300
Query: 338 DLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNT-LAECKYTIQDDGHS 511
D+++G+ HT V +V S +R +VS + D+TIKLW+ C T+ +
Sbjct: 301 DVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTVLFTSNC 360
Query: 512 DWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCA 691
+ + C+ + S D +++W + KL GHS + +V++S +G+
Sbjct: 361 NAI-CLSID----GLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRIL 415
Query: 692 SGG 700
+ G
Sbjct: 416 TSG 418
Score = 60.1 bits (139), Expect = 1e-09
Identities = 37/157 (23%), Positives = 75/157 (47%), Gaps = 4/157 (2%)
Frame = +2
Query: 239 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN 418
R++ H +V + +G D+ +++WD +G + ++L +A + DN
Sbjct: 226 RIHAHEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDN 285
Query: 419 RQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCV---RFSPNHANPIIVSCGWDRT 586
+ +++ + + +W+ + ++T+ GH+D V V +FS H +VS +DRT
Sbjct: 286 KSVIAATSSNNLFVWDVSSGRVRHTL--TGHTDKVCAVDVSKFSSRH----VVSAAYDRT 339
Query: 587 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASG 697
+K+W L + N + + N + +S DG SG
Sbjct: 340 IKLWDL-HKGYCTNTVLFTSNCNAICLSIDGLTVFSG 375
Score = 60.1 bits (139), Expect = 1e-09
Identities = 50/180 (27%), Positives = 87/180 (48%), Gaps = 5/180 (2%)
Frame = +2
Query: 83 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 262
++R TL GH V + + ++S++ D+T+ +W L + G + S+
Sbjct: 306 RVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHK-----GYCTNTVLFTSN- 359
Query: 263 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 442
+ + LS DG SG D LRLWD+ GK H+ V SV+ S + +I++ R
Sbjct: 360 CNAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGR 419
Query: 443 DKTIKLWNT-LAECKYTIQDDGH---SDWV-SCVRFSPNHANPIIVSCGWDRTVKVWHLT 607
D +++T E T++ G+ S+W SC+ SP+ + + + D +V VW L+
Sbjct: 420 DNVHNVFDTRTLEICGTLRASGNRLASNWSRSCI--SPD--DDYVAAGSADGSVHVWSLS 475
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 62.9 bits (146), Expect = 2e-10
Identities = 47/204 (23%), Positives = 90/204 (44%), Gaps = 3/204 (1%)
Frame = +2
Query: 95 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 274
T GH G + +A +P ++ + D +WK+ + +P GH +S +
Sbjct: 65 TFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELP-----GHKDSVSCL 119
Query: 275 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 454
S DG SG D ++++D ++G + + V + +++GS D ++
Sbjct: 120 AFSYDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSL 179
Query: 455 KLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCK---LKI 625
+WN E Y GH+ V+C F+P+ +I + D ++ VW+ C+ +
Sbjct: 180 WMWNADKEA-YLNMFSGHNLNVTCGDFTPD--GKLICTGSDDASLIVWNPKTCESIHIVK 236
Query: 626 NHLGHSGYLNTVTVSPDGSLCASG 697
H H+ L + ++ + SL SG
Sbjct: 237 GHPYHTEGLTCLDINSNSSLAISG 260
Score = 49.2 bits (112), Expect = 3e-06
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 5/202 (2%)
Frame = +2
Query: 104 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 283
GHN VT P +I + S D +LIVW E+ + I + Y H+ ++ + ++
Sbjct: 195 GHNLNVTCGDFTPD-GKLICTGSDDASLIVWNPKTCESIH-IVKGHPY-HTEGLTCLDIN 251
Query: 284 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI---VSGSRDKTI 454
S+ + A+SGS D ++ + ++ GK HT V V FS + I +G DK +
Sbjct: 252 SNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKL 311
Query: 455 KLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH--LTNCKLKIN 628
+W+ I + H + V+ + + + + C + TV +W L NC +
Sbjct: 312 IIWDLQHSTPRFICE--HEEGVTSLTWI-GTSKYLATGCA-NGTVSIWDSLLGNC-VHTY 366
Query: 629 HLGHSGYLNTVTVSPDGSLCAS 694
H GH + ++VS + S
Sbjct: 367 H-GHQDAVQAISVSTNTDFIVS 387
Score = 42.7 bits (96), Expect = 2e-04
Identities = 36/164 (21%), Positives = 66/164 (40%), Gaps = 1/164 (0%)
Frame = +2
Query: 209 DENNYGIPQKRLYGHSHFISDVVLS-SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 385
DEN+ + GH + + S +D +G D LW + G H
Sbjct: 57 DENDDSV--HTFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKD 114
Query: 386 DVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIV 565
V +AFS D + + SG D +++++ + + DG + VR+ P I++
Sbjct: 115 SVSCLAFSYDGQLLASGGLDGVVQIFDASSGTLKCVL-DGPGAGIEWVRWHPR--GHIVL 171
Query: 566 SCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASG 697
+ D ++ +W+ GH+ + +PDG L +G
Sbjct: 172 AGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTG 215
Score = 41.1 bits (92), Expect = 7e-04
Identities = 29/133 (21%), Positives = 56/133 (42%), Gaps = 2/133 (1%)
Frame = +2
Query: 77 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSS--RDKTLIVWKLTRDENNYGIPQKRLYG 250
T K+ +L H V + +P + L+++ DK LI+W L + +
Sbjct: 273 TGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQHSTPRF------ICE 326
Query: 251 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 430
H ++ + Y +G + T+ +WD G + H V +++ S + IV
Sbjct: 327 HEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTNTDFIV 386
Query: 431 SGSRDKTIKLWNT 469
S S D T +++ +
Sbjct: 387 SVSVDNTARVFES 399
Score = 31.5 bits (68), Expect = 0.56
Identities = 19/66 (28%), Positives = 29/66 (43%)
Frame = +2
Query: 503 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 682
GH + + SP A ++ + G D +W + N GH ++ + S DG
Sbjct: 68 GHKGELYALACSPTDAT-LVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDGQ 126
Query: 683 LCASGG 700
L ASGG
Sbjct: 127 LLASGG 132
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 62.1 bits (144), Expect = 3e-10
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 10/177 (5%)
Frame = +2
Query: 98 LRGHNGWVTQIATNP--KYPD----MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSH 259
L GH V +A NP + D ++ S S D T+ +W+ + ++ H+
Sbjct: 16 LEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEETHTR 75
Query: 260 FISDVVLSSDGNYALSGSWDKTLRLWDLAAGK--TTRRFEDHTKDVLSVAFSVDNRQIVS 433
+ S G + S+D T +W + E H +V SV+++ + +
Sbjct: 76 TVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGSCLAT 135
Query: 434 GSRDKTIKLWNTLAECKYTIQD--DGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 598
SRDK++ +W L +Y GH+ V V++ P ++ SC +D T+KVW
Sbjct: 136 CSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHP--TMDVLFSCSYDNTIKVW 190
Score = 54.0 bits (124), Expect = 9e-08
Identities = 50/185 (27%), Positives = 84/185 (45%), Gaps = 13/185 (7%)
Frame = +2
Query: 107 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQK---RLYGHSHFISDVV 277
H V A +P ++ ++S D T +WK NYG + L GH + + V
Sbjct: 73 HTRTVRSCAWSPS-GQLLATASFDGTTGIWK------NYGSEFECISTLEGHENEVKSVS 125
Query: 278 LSSDGNYALSGSWDKTLRLWDLAAGKT---TRRFEDHTKDVLSVAFSVDNRQIVSGSRDK 448
++ G+ + S DK++ +W++ G HT+DV V + + S S D
Sbjct: 126 WNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDN 185
Query: 449 TIKLW-----NTLAECKYTI--QDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLT 607
TIK+W + +C T+ ++GHS V + F N A +V+C D T+K+W
Sbjct: 186 TIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISF--NAAGDKMVTCSDDLTLKIWGTD 243
Query: 608 NCKLK 622
K++
Sbjct: 244 IAKMQ 248
Score = 53.2 bits (122), Expect = 2e-07
Identities = 49/192 (25%), Positives = 89/192 (46%), Gaps = 23/192 (11%)
Frame = +2
Query: 98 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ---KRLYGHSHFIS 268
L GH V + +P D++ S S D T+ VW D+ Y Q + GHS +
Sbjct: 159 LTGHTQDVKMVQWHPTM-DVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVW 217
Query: 269 DVVLSSDGNYALSGSWDKTLRLW--DLAAGKTTRRFED----------HTKDVLSVAFSV 412
+ ++ G+ ++ S D TL++W D+A ++ + H + + S +S
Sbjct: 218 SISFNAAGDKMVTCSDDLTLKIWGTDIAKMQSGEEYAPWIHLCTLSGYHDRTIYSAHWSR 277
Query: 413 DNRQIVSGSRDKTIKLW-----NTLAECKYTI---QDDGHSDWVSCVRFSPNHANPIIVS 568
D+ I SG+ D I+L+ +++ Y + ++ H + V+ V++SP N ++ S
Sbjct: 278 DDI-IASGAGDNAIRLFVDSKHDSVDGPSYNLLLKKNKAHENDVNSVQWSPGEGNRLLAS 336
Query: 569 CGWDRTVKVWHL 604
D VK+W L
Sbjct: 337 ASDDGMVKIWQL 348
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 62.1 bits (144), Expect = 3e-10
Identities = 48/197 (24%), Positives = 90/197 (45%)
Frame = +2
Query: 83 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 262
+LR TL+GH G V I+++ I+S S D ++IVW D+ + ++ L GH
Sbjct: 890 ELRATLKGHTGTVRAISSD---RGKIVSGSDDLSVIVW----DKQTTQLLEE-LKGHDSQ 941
Query: 263 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 442
+S V + S G L+ + D T+++WD+ + +LS+ + + + R
Sbjct: 942 VSCVKMLS-GERVLTAAHDGTVKMWDVRTDMCVATVGRCSSAILSLEYDDSTGILAAAGR 1000
Query: 443 DKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLK 622
D +W+ + K + GH+ W+ +R +++ D T +VW ++
Sbjct: 1001 DTVANIWD-IRSGKQMHKLKGHTKWIRSIRM----VEDTLITGSDDWTARVWSVSRGSCD 1055
Query: 623 INHLGHSGYLNTVTVSP 673
H+G + +V SP
Sbjct: 1056 AVLACHAGPVQSVEYSP 1072
Score = 47.2 bits (107), Expect = 1e-05
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Frame = +2
Query: 287 DGNYALSGSWDKTLRLWD--LAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 460
D + +SGS D +++WD L + + HT V ++ S D +IVSGS D ++ +
Sbjct: 866 DAGFFISGSTDCLVKIWDPSLRGSELRATLKGHTGTVRAI--SSDRGKIVSGSDDLSVIV 923
Query: 461 WNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 598
W+ + + GH VSCV+ +++ D TVK+W
Sbjct: 924 WDK-QTTQLLEELKGHDSQVSCVKMLSGER---VLTAAHDGTVKMW 965
Score = 44.8 bits (101), Expect = 6e-05
Identities = 43/211 (20%), Positives = 90/211 (42%), Gaps = 12/211 (5%)
Frame = +2
Query: 98 LRGHNGWVTQI--ATNPKYPDMI---------LSSSRDKTLIVWKLTRDENNYGIPQKRL 244
L+GH G VT + T + D++ +S S D + +W + + + L
Sbjct: 839 LKGHGGAVTALHSVTRREVCDLVGDREDAGFFISGSTDCLVKIWDPSLRGSEL---RATL 895
Query: 245 YGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 424
GH+ + +SSD +SGS D ++ +WD + + H V V + +
Sbjct: 896 KGHTGTVR--AISSDRGKIVSGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVKM-LSGER 952
Query: 425 IVSGSRDKTIKLWNTLAE-CKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 601
+++ + D T+K+W+ + C T+ G + + + + I+ + G D +W
Sbjct: 953 VLTAAHDGTVKMWDVRTDMCVATV---GRCS-SAILSLEYDDSTGILAAAGRDTVANIWD 1008
Query: 602 LTNCKLKINHLGHSGYLNTVTVSPDGSLCAS 694
+ + K GH+ ++ ++ + D + S
Sbjct: 1009 IRSGKQMHKLKGHTKWIRSIRMVEDTLITGS 1039
Score = 43.6 bits (98), Expect = 1e-04
Identities = 38/157 (24%), Positives = 73/157 (46%), Gaps = 1/157 (0%)
Frame = +2
Query: 74 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 253
+T +L L+GH+ V+ + + +L+++ D T+ +W + D + +
Sbjct: 927 QTTQLLEELKGHDSQVSCVKMLSG--ERVLTAAHDGTVKMWDVRTDMCVATVGRCS---- 980
Query: 254 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 433
S +S S G A +G D +WD+ +GK + + HTK + S+ D +++
Sbjct: 981 SAILSLEYDDSTGILAAAGR-DTVANIWDIRSGKQMHKLKGHTKWIRSIRMVEDT--LIT 1037
Query: 434 GSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSP 541
GS D T ++W+ + C + H+ V V +SP
Sbjct: 1038 GSDDWTARVWSVSRGSCDAVLA--CHAGPVQSVEYSP 1072
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 61.7 bits (143), Expect = 5e-10
Identities = 41/151 (27%), Positives = 72/151 (47%), Gaps = 19/151 (12%)
Frame = +2
Query: 251 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR-------------------RFE 373
H + V LS D + S S D T+ WD+++GKT + R +
Sbjct: 160 HRRSVVSVALSDDDSRGFSASKDGTIMHWDVSSGKTDKYIWPSDEILKSHGMKLREPRNK 219
Query: 374 DHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHAN 553
+H+++ L++A S D R + +G D+ + +W+ ++ GH + VSC+ F +
Sbjct: 220 NHSRESLALAVSSDGRYLATGGVDRHVHIWDVRTR-EHVQAFPGHRNTVSCLCF--RYGT 276
Query: 554 PIIVSCGWDRTVKVWHLTNCKLKINHLGHSG 646
+ S +DRTVKVW++ + + GH G
Sbjct: 277 SELYSGSFDRTVKVWNVEDKAFITENHGHQG 307
Score = 56.4 bits (130), Expect = 2e-08
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Frame = +2
Query: 158 ILSSSRDKTLIVWKLTRDENNYGIP--QKRLYGHSHFISDVVLSSDGNYALSGSWDKTLR 331
+ S DK +W ++G+ + R HS + +SSDG Y +G D+ +
Sbjct: 190 VSSGKTDK--YIWPSDEILKSHGMKLREPRNKNHSRESLALAVSSDGRYLATGGVDRHVH 247
Query: 332 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 508
+WD+ + + F H V + F ++ SGS D+T+K+WN + + + ++ GH
Sbjct: 248 IWDVRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKVWN-VEDKAFITENHGH 305
Score = 34.7 bits (76), Expect = 0.060
Identities = 28/123 (22%), Positives = 54/123 (43%)
Frame = +2
Query: 176 DKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 355
D+ + +W + E+ P GH + +S + + SGS+D+T+++W++
Sbjct: 243 DRHVHIWDVRTREHVQAFP-----GHRNTVSCLCFRYGTSELYSGSFDRTVKVWNVEDKA 297
Query: 356 TTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRF 535
H ++L++ R + G RD+T+ L++ + E I S SC
Sbjct: 298 FITENHGHQGEILAIDALRKERALTVG-RDRTM-LYHKVPESTRMIYRAPASSLESCCFI 355
Query: 536 SPN 544
S N
Sbjct: 356 SDN 358
Score = 28.3 bits (60), Expect = 5.2
Identities = 30/119 (25%), Positives = 52/119 (43%)
Frame = +2
Query: 158 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 337
+ S S D+T+ VW + E+ I + +GH I + + AL+ D+T+ L+
Sbjct: 279 LYSGSFDRTVKVWNV---EDKAFITEN--HGHQGEIL-AIDALRKERALTVGRDRTM-LY 331
Query: 338 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSD 514
T + + S F DN + +SGS + T+ LW L + + + H D
Sbjct: 332 HKVPESTRMIYRAPASSLESCCFISDN-EYLSGSDNGTVALWGMLKKKPVFVFKNAHQD 389
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 61.7 bits (143), Expect = 5e-10
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Frame = +2
Query: 155 MILSSSRDKTLIVWKLTRDENNYGI--PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTL 328
M+++++ T VW+L R + P +L H+ I +LS Y + S DKT+
Sbjct: 176 MVVAANNRGTCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSDKTV 235
Query: 329 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 508
++W++ K + H + V FSVD +V+ S D T +LW+ A + + H
Sbjct: 236 KIWNVDGFKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGHH 295
Query: 509 SDWVSC 526
V C
Sbjct: 296 KATVCC 301
Score = 58.4 bits (135), Expect = 4e-09
Identities = 32/102 (31%), Positives = 55/102 (53%)
Frame = +2
Query: 98 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 277
L+ HNG + + +P + +SS DKT+ +W + + + + +K L GH ++ D V
Sbjct: 207 LQAHNGHILKCLLSPANKYLATASS-DKTVKIWNV----DGFKL-EKVLTGHQRWVWDCV 260
Query: 278 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 403
S DG + ++ S D T RLW + AGK + ++ H K + A
Sbjct: 261 FSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGHHKATVCCA 302
Score = 47.2 bits (107), Expect = 1e-05
Identities = 41/156 (26%), Positives = 78/156 (50%), Gaps = 4/156 (2%)
Frame = +2
Query: 149 PDMILSS-SRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKT 325
P +IL++ S D T+ W+ Y Q Y SH ++ + ++ D +Y L+ + +
Sbjct: 4 PSVILATASYDHTIRFWE-AETGRCYRTIQ---YPDSH-VNRLEITPDKHY-LAAACNPH 57
Query: 326 LRLWDLAAG--KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE-CKYTIQ 496
+RL+D+ + + ++ HT +V++V F D + + SGS D T+K+W+ A C+ +
Sbjct: 58 IRLFDVNSNSPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEYE 117
Query: 497 DDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 604
V+ V PN ++S + ++VW L
Sbjct: 118 SVAA---VNTVVLHPNQTE--LISGDQNGNIRVWDL 148
Score = 46.0 bits (104), Expect = 2e-05
Identities = 43/179 (24%), Positives = 74/179 (41%), Gaps = 7/179 (3%)
Frame = +2
Query: 164 SSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 343
S S D T+ +W L G ++ Y ++ VVL + +SG + +R+WDL
Sbjct: 95 SGSEDGTVKIWDLRAP----GCQKE--YESVAAVNTVVLHPNQTELISGDQNGNIRVWDL 148
Query: 344 AAGKTTRRFEDHTKD-VLSVAFSVDNRQIVSGSRDKTIKLWN------TLAECKYTIQDD 502
A + V S+ D +V+ + T +W T+ E + +
Sbjct: 149 RANSCSCELVPEVDTAVRSLTVMWDGTMVVAANNRGTCYVWRLLRGKQTMTEFEPLHKLQ 208
Query: 503 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDG 679
H+ + SP AN + + D+TVK+W++ KL+ GH ++ S DG
Sbjct: 209 AHNGHILKCLLSP--ANKYLATASSDKTVKIWNVDGFKLEKVLTGHQRWVWDCVFSVDG 265
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 61.7 bits (143), Expect = 5e-10
Identities = 31/122 (25%), Positives = 58/122 (47%), Gaps = 1/122 (0%)
Frame = +2
Query: 236 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 415
K+L GH + + + G Y ++GS D+ +++W + H D+ +A S +
Sbjct: 299 KKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSN 358
Query: 416 NRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPI-IVSCGWDRTVK 592
N + S S D I++W ++ GH+ V+ + FSP A+ ++S D T +
Sbjct: 359 NALVASASNDFVIRVWRLPDGMPISVL-RGHTGAVTAIAFSPRQASVYQLLSSSDDGTCR 417
Query: 593 VW 598
+W
Sbjct: 418 IW 419
Score = 33.5 bits (73), Expect = 0.14
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = +2
Query: 503 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 682
GH + V C F + + +++ DR VK+W + + GH G + + VS + +
Sbjct: 303 GHRNAVYCAIF--DRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSNNA 360
Query: 683 LCAS 694
L AS
Sbjct: 361 LVAS 364
Score = 33.1 bits (72), Expect = 0.18
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 12/92 (13%)
Frame = +2
Query: 98 LRGHNGWVTQIATNPKYPDM--ILSSSRDKTLIVWK------LTR----DENNYGIPQKR 241
LRGH G VT IA +P+ + +LSSS D T +W L R ++
Sbjct: 385 LRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWDARYSQWLPRIYVPSPSDANTGSTS 444
Query: 242 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 337
SH I +++G ++GS D R+W
Sbjct: 445 NASQSHQILCCAYNANGTIFVTGSSDSNARVW 476
Score = 31.9 bits (69), Expect = 0.42
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Frame = +2
Query: 350 GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCV 529
G +RF + V + +S+DNR +++ D I +WN A+ GHS+ S
Sbjct: 587 GGPRQRFLPTPRGVNMIIWSLDNRFVLAAIMDCRICVWNA-ADGSLVHCLTGHSE--SSY 643
Query: 530 RFSPNHANP-IIVSCGWDRTVKVWHL-TNCKLKINHLG 637
+ NP I +S G+D +W + +K+ +G
Sbjct: 644 VLDVHPFNPRIAMSAGYDGKTIIWDIWEGIPIKVYEIG 681
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 61.7 bits (143), Expect = 5e-10
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +2
Query: 242 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 421
L GH + ++ S S SWD T+RLWD+ A K T H DVL+VAF D +
Sbjct: 473 LSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGK 532
Query: 422 QIVSGSRDKTIKLWNTL-AECKYTIQ 496
Q+ S + D I W+T+ YTI+
Sbjct: 533 QLASSTLDGQINFWDTIEGVLMYTIE 558
Score = 52.4 bits (120), Expect = 3e-07
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 3/151 (1%)
Frame = +2
Query: 251 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT-KDVLSVAFSVDNRQI 427
H++ ++ + +D + LS S D T+R WD K + + T + +S+ +
Sbjct: 390 HTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTADPSGDVV 449
Query: 428 VSGSRDK-TIKLWNT-LAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 601
+G+ D I +W+ + K + GH V + FSP ++ S WD TV++W
Sbjct: 450 CAGTLDSFEIFVWSKKTGQIKDILS--GHEAPVHGLMFSP--LTQLLASSSWDYTVRLWD 505
Query: 602 LTNCKLKINHLGHSGYLNTVTVSPDGSLCAS 694
+ K + H+ + TV PDG AS
Sbjct: 506 VFASKGTVETFRHNHDVLTVAFRPDGKQLAS 536
Score = 50.0 bits (114), Expect = 1e-06
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +2
Query: 248 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 427
GH ++ V S D +G+ D +++W++ +G F +HT V ++ F DN +
Sbjct: 347 GHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSL 406
Query: 428 VSGSRDKTIKLWN 466
+S S D T++ W+
Sbjct: 407 LSASLDGTVRAWD 419
Score = 30.7 bits (66), Expect = 0.98
Identities = 18/73 (24%), Positives = 35/73 (47%)
Frame = +2
Query: 458 LWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLG 637
+W+ E Y ++ GH V+CV +SP+ + ++ + D VKVW++ + I
Sbjct: 333 VWDWRTET-YILKQQGHYFDVNCVTYSPD--SQLLATGADDNKVKVWNVMSGTCFITFTE 389
Query: 638 HSGYLNTVTVSPD 676
H+ + + D
Sbjct: 390 HTNAVTALHFMAD 402
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 61.7 bits (143), Expect = 5e-10
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Frame = +2
Query: 242 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 421
L GH + ++ S S SWD T+RLWD+ A K T H DVL+VAF D +
Sbjct: 513 LSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGK 572
Query: 422 QIVSGSRDKTIKLWNTL-AECKYTIQ 496
Q+ S + D I W+T+ YTI+
Sbjct: 573 QLASSTLDGQINFWDTIEGVLMYTIE 598
Score = 52.4 bits (120), Expect = 3e-07
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 3/151 (1%)
Frame = +2
Query: 251 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT-KDVLSVAFSVDNRQI 427
H++ ++ + +D + LS S D T+R WD K + + T + +S+ +
Sbjct: 430 HTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTADPSGDVV 489
Query: 428 VSGSRDK-TIKLWNT-LAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 601
+G+ D I +W+ + K + GH V + FSP ++ S WD TV++W
Sbjct: 490 CAGTLDSFEIFVWSKKTGQIKDILS--GHEAPVHGLMFSP--LTQLLASSSWDYTVRLWD 545
Query: 602 LTNCKLKINHLGHSGYLNTVTVSPDGSLCAS 694
+ K + H+ + TV PDG AS
Sbjct: 546 VFASKGTVETFRHNHDVLTVAFRPDGKQLAS 576
Score = 50.0 bits (114), Expect = 1e-06
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +2
Query: 248 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 427
GH ++ V S D +G+ D +++W++ +G F +HT V ++ F DN +
Sbjct: 387 GHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSL 446
Query: 428 VSGSRDKTIKLWN 466
+S S D T++ W+
Sbjct: 447 LSASLDGTVRAWD 459
Score = 30.7 bits (66), Expect = 0.98
Identities = 18/73 (24%), Positives = 35/73 (47%)
Frame = +2
Query: 458 LWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLG 637
+W+ E Y ++ GH V+CV +SP+ + ++ + D VKVW++ + I
Sbjct: 373 VWDWRTET-YILKQQGHYFDVNCVTYSPD--SQLLATGADDNKVKVWNVMSGTCFITFTE 429
Query: 638 HSGYLNTVTVSPD 676
H+ + + D
Sbjct: 430 HTNAVTALHFMAD 442
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 60.9 bits (141), Expect = 8e-10
Identities = 37/120 (30%), Positives = 58/120 (48%)
Frame = +2
Query: 101 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 280
+GH V +A N M++S +K L VW + G +L GH+ + ++L
Sbjct: 210 KGHKESVYALAMNDT-GTMLVSGGTEKVLRVW-----DPRTGSKSMKLRGHTDNVRVLLL 263
Query: 281 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 460
S G + LSGS D +RLWDL + + HT V ++A + + SG RD+ + L
Sbjct: 264 DSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYL 323
Score = 54.0 bits (124), Expect = 9e-08
Identities = 36/113 (31%), Positives = 61/113 (53%), Gaps = 4/113 (3%)
Frame = +2
Query: 278 LSSDGNYALSGSWDKTLRLW--DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKT 451
+S+D +Y +GS D TL+ W D A + FE H V A + ++ +VS S D T
Sbjct: 48 VSNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALAGEST-LVSCSSDTT 106
Query: 452 IKLWNTLAE--CKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 604
+K W+ L++ C T++ HSD+V+C+ + + N ++ S G V +W +
Sbjct: 107 VKTWDGLSDGVCTRTLRQ--HSDYVTCLAVAAKN-NNVVASGGLGGEVFIWDI 156
Score = 52.0 bits (119), Expect = 4e-07
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Frame = +2
Query: 248 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 427
GH + + ++ G +SG +K LR+WD G + + HT +V + R
Sbjct: 211 GHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFC 270
Query: 428 VSGSRDKTIKLWNT-LAECKYTIQDDGHSDWVSCVRFSPNH 547
+SGS D I+LW+ C +T S W S +H
Sbjct: 271 LSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSH 311
Score = 46.8 bits (106), Expect = 1e-05
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Frame = +2
Query: 386 DVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKY-TIQDDGHSDWVSCVRFSPNHANPII 562
DVL + S D + +GSRD T+K W + + + + H DWV+ + +
Sbjct: 42 DVLKSSVSNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALA---GESTL 98
Query: 563 VSCGWDRTVKVWH-LTNCKLKINHLGHSGYLNTVTV-SPDGSLCASGG 700
VSC D TVK W L++ HS Y+ + V + + ++ ASGG
Sbjct: 99 VSCSSDTTVKTWDGLSDGVCTRTLRQHSDYVTCLAVAAKNNNVVASGG 146
Score = 42.7 bits (96), Expect = 2e-04
Identities = 42/203 (20%), Positives = 79/203 (38%), Gaps = 2/203 (0%)
Frame = +2
Query: 95 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 274
T H WV A + ++S S D T+ W D G+ + L HS +++ +
Sbjct: 79 TFESHVDWVNDAALAGE--STLVSCSSDTTVKTWDGLSD----GVCTRTLRQHSDYVTCL 132
Query: 275 -VLSSDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDK 448
V + + N SG + +WD+ AA + D +D S + + +
Sbjct: 133 AVAAKNNNVVASGGLGGEVFIWDIEAALSPVTKPNDANEDSSSNGANGPVTSLRTVGSSN 192
Query: 449 TIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKIN 628
I + ++ + GH + S + N ++VS G ++ ++VW +
Sbjct: 193 NISVQSSPSHGYTPTIAKGHKE--SVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMK 250
Query: 629 HLGHSGYLNTVTVSPDGSLCASG 697
GH+ + + + G C SG
Sbjct: 251 LRGHTDNVRVLLLDSTGRFCLSG 273
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 60.9 bits (141), Expect = 8e-10
Identities = 37/120 (30%), Positives = 58/120 (48%)
Frame = +2
Query: 101 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 280
+GH V +A N M++S +K L VW + G +L GH+ + ++L
Sbjct: 210 KGHKESVYALAMNDT-GTMLVSGGTEKVLRVW-----DPRTGSKSMKLRGHTDNVRVLLL 263
Query: 281 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 460
S G + LSGS D +RLWDL + + HT V ++A + + SG RD+ + L
Sbjct: 264 DSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYL 323
Score = 54.0 bits (124), Expect = 9e-08
Identities = 36/113 (31%), Positives = 61/113 (53%), Gaps = 4/113 (3%)
Frame = +2
Query: 278 LSSDGNYALSGSWDKTLRLW--DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKT 451
+S+D +Y +GS D TL+ W D A + FE H V A + ++ +VS S D T
Sbjct: 48 VSNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALAGEST-LVSCSSDTT 106
Query: 452 IKLWNTLAE--CKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 604
+K W+ L++ C T++ HSD+V+C+ + + N ++ S G V +W +
Sbjct: 107 VKTWDGLSDGVCTRTLRQ--HSDYVTCLAVAAKN-NNVVASGGLGGEVFIWDI 156
Score = 52.0 bits (119), Expect = 4e-07
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Frame = +2
Query: 248 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 427
GH + + ++ G +SG +K LR+WD G + + HT +V + R
Sbjct: 211 GHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFC 270
Query: 428 VSGSRDKTIKLWNT-LAECKYTIQDDGHSDWVSCVRFSPNH 547
+SGS D I+LW+ C +T S W S +H
Sbjct: 271 LSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSH 311
Score = 46.8 bits (106), Expect = 1e-05
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Frame = +2
Query: 386 DVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKY-TIQDDGHSDWVSCVRFSPNHANPII 562
DVL + S D + +GSRD T+K W + + + + H DWV+ + +
Sbjct: 42 DVLKSSVSNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALA---GESTL 98
Query: 563 VSCGWDRTVKVWH-LTNCKLKINHLGHSGYLNTVTV-SPDGSLCASGG 700
VSC D TVK W L++ HS Y+ + V + + ++ ASGG
Sbjct: 99 VSCSSDTTVKTWDGLSDGVCTRTLRQHSDYVTCLAVAAKNNNVVASGG 146
Score = 42.7 bits (96), Expect = 2e-04
Identities = 42/203 (20%), Positives = 79/203 (38%), Gaps = 2/203 (0%)
Frame = +2
Query: 95 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 274
T H WV A + ++S S D T+ W D G+ + L HS +++ +
Sbjct: 79 TFESHVDWVNDAALAGE--STLVSCSSDTTVKTWDGLSD----GVCTRTLRQHSDYVTCL 132
Query: 275 -VLSSDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDK 448
V + + N SG + +WD+ AA + D +D S + + +
Sbjct: 133 AVAAKNNNVVASGGLGGEVFIWDIEAALSPVTKPNDANEDSSSNGANGPVTSLRTVGSSN 192
Query: 449 TIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKIN 628
I + ++ + GH + S + N ++VS G ++ ++VW +
Sbjct: 193 NISVQSSPSHGYTPTIAKGHKE--SVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMK 250
Query: 629 HLGHSGYLNTVTVSPDGSLCASG 697
GH+ + + + G C SG
Sbjct: 251 LRGHTDNVRVLLLDSTGRFCLSG 273
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 60.9 bits (141), Expect = 8e-10
Identities = 48/181 (26%), Positives = 87/181 (48%), Gaps = 3/181 (1%)
Frame = +2
Query: 83 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 262
++ TL GH+ VT I D++L++S DKT+ +W + D NY + L HS
Sbjct: 255 QILSTLTGHSKKVTSIKFVGD-TDLVLTASSDKTVRIWGCSED-GNY-TSRHTLKDHSAE 311
Query: 263 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK-DV--LSVAFSVDNRQIVS 433
+ V + + Y +S S D T +DL++G + D ++ DV + AF D + +
Sbjct: 312 VRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYTAAAFHPDGLILGT 371
Query: 434 GSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNC 613
G+ +K+W+ ++ + GH+ ++ + FS N + + D V++W L
Sbjct: 372 GTAQSIVKIWDVKSQAN-VAKFGGHNGEITSISFSEN--GYFLATAALD-GVRLWDLRKL 427
Query: 614 K 616
K
Sbjct: 428 K 428
Score = 54.8 bits (126), Expect = 5e-08
Identities = 41/156 (26%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
Frame = +2
Query: 242 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAA-GKTTRR--FEDHTKDVLSVAFSV 412
L GHS ++ + D + L+ S DKT+R+W + G T R +DH+ +V +V
Sbjct: 260 LTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEVRAVTVHA 319
Query: 413 DNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRT- 586
N+ VS S D T ++ + C + D +D V+ + H + +I+ G ++
Sbjct: 320 TNKYFVSASLDSTWCFYDLSSGLCLAQVTDASEND-VNYTA-AAFHPDGLILGTGTAQSI 377
Query: 587 VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCAS 694
VK+W + + GH+G + +++ S +G A+
Sbjct: 378 VKIWDVKSQANVAKFGGHNGEITSISFSENGYFLAT 413
Score = 48.0 bits (109), Expect = 6e-06
Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 4/150 (2%)
Frame = +2
Query: 260 FISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 439
F D++ S D +G D T L+D +G+ H+K V S+ F D +++ S
Sbjct: 226 FSMDILHSKD--VIATGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTAS 283
Query: 440 RDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHA-NPIIVSCGWDRTVKVWHLTN-- 610
DKT+++W + YT + D + VR HA N VS D T + L++
Sbjct: 284 SDKTVRIWGCSEDGNYTSRHT-LKDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGL 342
Query: 611 CKLKINHLGHSGYLNTVTV-SPDGSLCASG 697
C ++ + T PDG + +G
Sbjct: 343 CLAQVTDASENDVNYTAAAFHPDGLILGTG 372
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 60.1 bits (139), Expect = 1e-09
Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 2/167 (1%)
Frame = +2
Query: 104 GHNGW-VTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 280
GH GW V + +P +++S +D+ + +W TR G L+GH + + V
Sbjct: 266 GH-GWDVKSVDWHPT-KSLLVSGGKDQLVKLWD-TRS----GRELCSLHGHKNIVLSVKW 318
Query: 281 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ-IVSGSRDKTIK 457
+ +GN+ L+ S D+ ++L+D+ K + F HTKDV S+A+ + + VSGS D +I
Sbjct: 319 NQNGNWLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSIC 378
Query: 458 LWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 598
W E + H + V + + P ++ S D T K W
Sbjct: 379 HWIVGHENPQIEIPNAHDNSVWDLAWHP--IGYLLCSGSNDHTTKFW 423
Score = 44.4 bits (100), Expect = 7e-05
Identities = 32/129 (24%), Positives = 54/129 (41%), Gaps = 1/129 (0%)
Frame = +2
Query: 263 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 442
I+ V+ + G ++GS LW+ + + H + + S+ +S + +VSG
Sbjct: 126 INRVLWTPSGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQPIRSMVWSHNENYMVSGDD 185
Query: 443 DKTIKLW-NTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKL 619
T+K W N + K H + + + F SC D TVKVW T C
Sbjct: 186 GGTLKYWQNNMNNVK--ANKTAHKESIRDLSFCKTDLK--FCSCSDDTTVKVWDFTKCVD 241
Query: 620 KINHLGHSG 646
+ + G+ G
Sbjct: 242 ESSLTGYIG 250
Score = 41.5 bits (93), Expect = 5e-04
Identities = 33/127 (25%), Positives = 49/127 (38%), Gaps = 1/127 (0%)
Frame = +2
Query: 242 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 421
L H I +V S + NY +SG TL+ W H + + ++F +
Sbjct: 161 LQAHDQPIRSMVWSHNENYMVSGDDGGTLKYWQNNMNNVKANKTAHKESIRDLSFCKTDL 220
Query: 422 QIVSGSRDKTIKLWNTLAECKYTIQDDGH-SDWVSCVRFSPNHANPIIVSCGWDRTVKVW 598
+ S S D T+K+W+ +C G+ V +RF P GWD W
Sbjct: 221 KFCSCSDDTTVKVWD-FTKCVDESSLTGYIGKGVIEIRFG---VMPCNAGHGWDVKSVDW 276
Query: 599 HLTNCKL 619
H T L
Sbjct: 277 HPTKSLL 283
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/87 (27%), Positives = 39/87 (44%)
Frame = +2
Query: 77 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 256
T+K + RGH VT +A +P + + +S S D ++ W + + IP H
Sbjct: 341 TMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHWIVGHENPQIEIPN----AHD 396
Query: 257 HFISDVVLSSDGNYALSGSWDKTLRLW 337
+ + D+ G SGS D T + W
Sbjct: 397 NSVWDLAWHPIGYLLCSGSNDHTTKFW 423
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 60.1 bits (139), Expect = 1e-09
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 4/205 (1%)
Frame = +2
Query: 95 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 274
T+ GH V +A + ++ S SRDK+++ + E++ +L GH I +
Sbjct: 246 TMEGHRLRVGALAWSSS---VLSSGSRDKSILQRDIRTQEDHVS----KLKGHKSEICGL 298
Query: 275 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS---GSRD 445
SSD SG D L +W+ + + RF +H V ++A+S + +++ G+ D
Sbjct: 299 KWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEHAAAVKAIAWSPHHFGLLASGGGTAD 358
Query: 446 KTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRT-VKVWHLTNCKLK 622
+ I+ WNT D + V + +S N N ++ + G+ + + VW
Sbjct: 359 RCIRFWNTTTNTHLNCVDT--NSQVCNLVWSKN-VNELVSTHGYSQNQIIVWKYPTMSKL 415
Query: 623 INHLGHSGYLNTVTVSPDGSLCASG 697
GHS + + VSPDG +G
Sbjct: 416 ATLTGHSYRVLYLAVSPDGQTIVTG 440
Score = 46.8 bits (106), Expect = 1e-05
Identities = 36/138 (26%), Positives = 66/138 (47%), Gaps = 1/138 (0%)
Frame = +2
Query: 290 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 469
G + G+ T+++WD+ K R E H V ++A+S + + SGSRDK+I +
Sbjct: 221 GTHLAIGTSSGTVQIWDVLRCKNIRTMEGHRLRVGALAWS--SSVLSSGSRDKSILQRDI 278
Query: 470 LAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGY 649
+ + + GH + +++S + N + S G D + VW+ + + + H+
Sbjct: 279 RTQEDHVSKLKGHKSEICGLKWSSD--NRELASGGNDNKLFVWNQHSTQPVLRFCEHAAA 336
Query: 650 LNTVTVSPDG-SLCASGG 700
+ + SP L ASGG
Sbjct: 337 VKAIAWSPHHFGLLASGG 354
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +2
Query: 263 ISDVVLSSDGNYALS--GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSG 436
+ ++V S + N +S G + +W H+ VL +A S D + IV+G
Sbjct: 381 VCNLVWSKNVNELVSTHGYSQNQIIVWKYPTMSKLATLTGHSYRVLYLAVSPDGQTIVTG 440
Query: 437 SRDKTIKLWNTLAECK 484
+ D+T++ WN K
Sbjct: 441 AGDETLRFWNVFPSPK 456
Score = 33.1 bits (72), Expect = 0.18
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +2
Query: 242 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 343
L GHS+ + + +S DG ++G+ D+TLR W++
Sbjct: 418 LTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWNV 451
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 59.7 bits (138), Expect = 2e-09
Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 1/130 (0%)
Frame = +2
Query: 296 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TL 472
+ S +D R+WDL + F+ H K VLSV FS + + SG D ++W+ +
Sbjct: 144 FKASSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRM 203
Query: 473 AECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYL 652
+ Y I H + VS V++ P + + D V +W + L + +GH +
Sbjct: 204 RKLLYII--PAHVNLVSQVKYEPQE-RYFLATASHDMNVNIWSGRDFSLVKSLVGHESKV 260
Query: 653 NTVTVSPDGS 682
++ ++ D S
Sbjct: 261 ASLDIAVDSS 270
Score = 38.7 bits (86), Expect = 0.004
Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 4/156 (2%)
Frame = +2
Query: 245 YGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF---EDHTKDVLSVAFS-V 412
+G ++ LS DG ++ S +LW++ + T + + H + V V FS V
Sbjct: 60 FGDDRPLTGCSLSRDGKILVTCSLSGVPKLWEVP--QVTNKIVVLKGHKEHVTDVVFSSV 117
Query: 413 DNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVK 592
D+ + + S D+T K+W T T + S G+D +
Sbjct: 118 DDECLATASTDRTEKIWKTDGTLLQTFK----------------------ASSGFDSLAR 155
Query: 593 VWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG 700
VW L + + GH + +V SP+G ASGG
Sbjct: 156 VWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGG 191
Score = 38.3 bits (85), Expect = 0.005
Identities = 30/102 (29%), Positives = 40/102 (39%), Gaps = 1/102 (0%)
Frame = +2
Query: 164 SSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 343
SS D VW L R N I Q GH + V S +G + SG D R+WDL
Sbjct: 147 SSGFDSLARVWDL-RTARNILIFQ----GHIKQVLSVDFSPNGYHLASGGEDNQCRIWDL 201
Query: 344 AAGKTTRRFEDHTKDVLSVAFSVDNRQ-IVSGSRDKTIKLWN 466
K H V V + R + + S D + +W+
Sbjct: 202 RMRKLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWS 243
Score = 28.3 bits (60), Expect = 5.2
Identities = 22/87 (25%), Positives = 39/87 (44%)
Frame = +2
Query: 338 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDW 517
D+ G + +F D + + + S D + +V+ S KLW + GH +
Sbjct: 52 DMVLGSS--KFGDD-RPLTGCSLSRDGKILVTCSLSGVPKLWEVPQVTNKIVVLKGHKEH 108
Query: 518 VSCVRFSPNHANPIIVSCGWDRTVKVW 598
V+ V FS + + + + DRT K+W
Sbjct: 109 VTDVVFS-SVDDECLATASTDRTEKIW 134
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 58.0 bits (134), Expect = 6e-09
Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 2/112 (1%)
Frame = +2
Query: 281 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 460
SSDG S DK LW K E+HT + + FS ++ + S DKT+++
Sbjct: 660 SSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVRV 719
Query: 461 WNTLAECK-YTIQD-DGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTN 610
W+ A+ K Y+++ GHS V+ + F P + +I SC D ++ W + N
Sbjct: 720 WD--ADNKGYSLRTFMGHSSMVTSLDFHP-IKDDLICSCDNDNEIRYWSINN 768
Score = 51.6 bits (118), Expect = 5e-07
Identities = 45/182 (24%), Positives = 76/182 (41%), Gaps = 2/182 (1%)
Frame = +2
Query: 155 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 334
M+ S+ DK ++W + P+ L H+ I+D+ S + S+DKT+R+
Sbjct: 665 MLASAGHDKKAVLWYTDTMK-----PKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVRV 719
Query: 335 WDL-AAGKTTRRFEDHTKDVLSVAF-SVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 508
WD G + R F H+ V S+ F + + I S D I+ W+ + G
Sbjct: 720 WDADNKGYSLRTFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRYWSINNGSCTRVYKGGS 779
Query: 509 SDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLC 688
+ +RF P + S V V + ++ + GH+ +N+V P G
Sbjct: 780 TQ----IRFQPRVGKYLAASSA--NLVNVLDVETQAIRHSLQGHANPINSVCWDPSGDFL 833
Query: 689 AS 694
AS
Sbjct: 834 AS 835
Score = 44.4 bits (100), Expect = 7e-05
Identities = 47/204 (23%), Positives = 87/204 (42%), Gaps = 4/204 (1%)
Frame = +2
Query: 95 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 274
T GH+ VT + +P D+I S D + W + N G + G S I
Sbjct: 731 TFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRYWSI-----NNGSCTRVYKGGSTQIR-- 783
Query: 275 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 454
G Y L+ S + + D+ + H + SV + + S S D +
Sbjct: 784 FQPRVGKY-LAASSANLVNVLDVETQAIRHSLQGHANPINSVCWDPSGDFLASVSED-MV 841
Query: 455 KLW----NTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLK 622
K+W + EC + + +G+ + SCV F P + + +++ C +++++W+++ K
Sbjct: 842 KVWTLGTGSEGECVHELSCNGNK-FQSCV-FHPAYPSLLVIGC--YQSLELWNMSENK-T 896
Query: 623 INHLGHSGYLNTVTVSPDGSLCAS 694
+ H G + ++ VS L AS
Sbjct: 897 MTLPAHEGLITSLAVSTATGLVAS 920
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 56.8 bits (131), Expect = 1e-08
Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 4/125 (3%)
Frame = +2
Query: 236 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAA-GKTTRRFEDH--TKDVLSVAF 406
+R+ I+ + +S DG + + + + LWDLA K +F H +K V+ F
Sbjct: 391 ERVISEEQPITSLSISGDGKFFIVNLSCQEIHLWDLAGEWKQPLKFSGHRQSKYVIRSCF 450
Query: 407 -SVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDR 583
+D+ I SGS D + +WN L K GHS V+CV ++P + ++ S D+
Sbjct: 451 GGLDSSFIASGSEDSQVYIWN-LKNTKPLEVLSGHSMTVNCVSWNPKNPR-MLASASDDQ 508
Query: 584 TVKVW 598
T+++W
Sbjct: 509 TIRIW 513
Score = 39.5 bits (88), Expect = 0.002
Identities = 31/150 (20%), Positives = 62/150 (41%), Gaps = 4/150 (2%)
Frame = +2
Query: 242 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR---RFEDHTKDVLSVAFSV 412
L H + + V S+ G Y + S D T +W + E H V V++S
Sbjct: 220 LVAHKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWSP 279
Query: 413 DNRQIVSGSRDKTIKLWNT-LAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTV 589
D+ ++++ + +KLW+ ++T ++ VS + P+ + S +R +
Sbjct: 280 DDTKLLTCGNAEVLKLWDVDTGVLRHTFGNNNTGFTVSSCAWFPDSTRLVCGSSDPERGI 339
Query: 590 KVWHLTNCKLKINHLGHSGYLNTVTVSPDG 679
+W ++K + + V+PDG
Sbjct: 340 VMWDTDGNEIKAWRGTRIPKVVDLAVTPDG 369
Score = 34.3 bits (75), Expect = 0.079
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +2
Query: 98 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 196
L GH+ V ++ NPK P M+ S+S D+T+ +W
Sbjct: 481 LSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 56.4 bits (130), Expect = 2e-08
Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 3/116 (2%)
Frame = +2
Query: 359 TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD---DGHSDWVSCV 529
+R ++ H K V SVA++ + ++ SGS D+T ++WN +D GH+D V +
Sbjct: 13 SREYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQL 72
Query: 530 RFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASG 697
+ P H++ + + G D++V++W + K + SG +T PDG+ A G
Sbjct: 73 CWDPKHSDLVATASG-DKSVRLWDARSGKC-TQQVELSGENINITYKPDGTHVAVG 126
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/94 (24%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Frame = +2
Query: 248 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR----RFEDHTKDVLSVAFSVD 415
GH + V +S+G SGS D+T R+W++ ++ + HT V + +
Sbjct: 18 GHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDPK 77
Query: 416 NRQIV-SGSRDKTIKLWNTLA-ECKYTIQDDGHS 511
+ +V + S DK+++LW+ + +C ++ G +
Sbjct: 78 HSDLVATASGDKSVRLWDARSGKCTQQVELSGEN 111
Score = 36.3 bits (80), Expect = 0.020
Identities = 23/90 (25%), Positives = 42/90 (46%)
Frame = +2
Query: 98 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 277
L+GH V Q+ +PK+ D++ ++S DK++ +W + Q L G + ++
Sbjct: 62 LKGHTDSVDQLCWDPKHSDLVATASGDKSVRLWDA---RSGKCTQQVELSGEN---INIT 115
Query: 278 LSSDGNYALSGSWDKTLRLWDLAAGKTTRR 367
DG + G+ D L + D+ K R
Sbjct: 116 YKPDGTHVAVGNRDDELTILDVRKFKPLHR 145
Score = 34.3 bits (75), Expect = 0.079
Identities = 21/79 (26%), Positives = 32/79 (40%)
Frame = +2
Query: 230 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 409
P L H+ + + G Y GS D + LWD++ R F V +++F+
Sbjct: 183 PLDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFTKLEWPVRTISFN 242
Query: 410 VDNRQIVSGSRDKTIKLWN 466
I S S D I + N
Sbjct: 243 YSGEYIASASEDLFIDIAN 261
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 55.6 bits (128), Expect = 3e-08
Identities = 42/120 (35%), Positives = 61/120 (50%), Gaps = 4/120 (3%)
Frame = +2
Query: 221 YGIPQKRLY---GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 391
+ I +K LY GH+ + D+ S D NY LS S DKT+RLW + + F H V
Sbjct: 314 FRIMEKPLYEFRGHTGEVLDISWSKD-NYLLSASMDKTVRLWKVGSNDCLGVFA-HNSYV 371
Query: 392 LSVAFS-VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVS 568
SV F+ V+ +SGS D +++WN ++ C D D +S V + P+ II S
Sbjct: 372 TSVQFNPVNENYFMSGSIDGKVRIWN-ISGCSVVDWAD-LKDIISAVCYRPDGQGGIIGS 429
Score = 47.6 bits (108), Expect = 8e-06
Identities = 36/128 (28%), Positives = 71/128 (55%), Gaps = 2/128 (1%)
Frame = +2
Query: 101 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 280
RGH G V I+ + + +LS+S DKT+ +WK+ ++ G+ + H+ +++ V
Sbjct: 325 RGHTGEVLDISWSKD--NYLLSASMDKTVRLWKVGSND-CLGV-----FAHNSYVTSVQF 376
Query: 281 SS-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS-VAFSVDNRQIVSGSRDKTI 454
+ + NY +SGS D +R+W++ +G + + D KD++S V + D + + GS + +
Sbjct: 377 NPVNENYFMSGSIDGKVRIWNI-SGCSVVDWAD-LKDIISAVCYRPDGQGGIIGSLNGSC 434
Query: 455 KLWNTLAE 478
+ +N E
Sbjct: 435 RFFNMSGE 442
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice sites
at introns 4 and 6
Length = 1017
Score = 55.6 bits (128), Expect = 3e-08
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Frame = +2
Query: 293 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWN- 466
NY S +D ++LWD+ G+ F +H K SV FS ++ SGS D ++KLWN
Sbjct: 767 NYLASSDYDGIVKLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSVKLWNI 826
Query: 467 TLAECKYTIQDDGHSDWVSCVRFSPNHAN 553
C TI++ + V CV+FSP ++
Sbjct: 827 NERNCLGTIRNIAN---VCCVQFSPQSSH 852
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 377 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 466
H K V S A +DN +V+ S D T+KLW+
Sbjct: 881 HNKAV-SYAKFLDNETLVTASTDNTLKLWD 909
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 55.6 bits (128), Expect = 3e-08
Identities = 39/115 (33%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Frame = +2
Query: 230 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 409
P + LYGH+ + D+ S D N LS S DKT+RLW + F H V V F+
Sbjct: 264 PFQELYGHTGDVLDLAWS-DSNLLLSASKDKTVRLWRTGCDQCLHVFH-HNNYVTCVEFN 321
Query: 410 -VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSC 571
V+ SGS D ++W L+E + D D +S + + PN N +V C
Sbjct: 322 PVNKNNFASGSIDGKARIWG-LSEERVVAWTDVR-DSISAISYQPN-GNGFVVGC 373
Score = 38.7 bits (86), Expect = 0.004
Identities = 40/176 (22%), Positives = 83/176 (47%), Gaps = 6/176 (3%)
Frame = +2
Query: 98 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 277
L GH G V +A + +++LS+S+DKT+ +W+ D+ + ++ H+++++ V
Sbjct: 268 LYGHTGDVLDLAWSDS--NLLLSASKDKTVRLWRTGCDQCLH------VFHHNNYVTCVE 319
Query: 278 LS--SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKT 451
+ + N+A SGS D R+W L+ + + D + ++++ + V G
Sbjct: 320 FNPVNKNNFA-SGSIDGKARIWGLSEERVV-AWTDVRDSISAISYQPNGNGFVVGCITGN 377
Query: 452 IKLWNTLAECKYTIQDD----GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLT 607
+ + L I D+ + ++ V F P + I+VS D V+++ T
Sbjct: 378 CRFYQILD--NDVIMDEQILIRGRNRITAVEFCPGSSEKILVS-SEDSKVRIFDKT 430
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 620 KINHLGHSGYLNTVTVSPDGSLCASGG 700
KIN GH G + T+ SPDG A+GG
Sbjct: 193 KIN--GHKGKIWTLKFSPDGKYLATGG 217
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 55.2 bits (127), Expect = 4e-08
Identities = 42/169 (24%), Positives = 83/169 (49%), Gaps = 4/169 (2%)
Frame = +2
Query: 110 NGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSD 289
+G V Q+ + D++ + ++D +++ W+ N + P L GH+ ++ V L
Sbjct: 227 SGPVGQVYSLVVGTDLLFAGTQDGSILAWRYNAATNCFE-PSASLTGHT--LAVVTLYVG 283
Query: 290 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 469
N SGS DKT+++W L + + DH+ V+S+ ++ ++S S D T+K+W
Sbjct: 284 ANRLYSGSMDKTIKVWSLDNLQCIQTLTDHSSVVMSLI--CWDQFLLSCSLDNTVKIWAA 341
Query: 470 L----AECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 604
+ E YT +++ H C A P+++ D T++++ L
Sbjct: 342 IEGGNLEVTYTHKEE-HGVLALC-GVHDAEAKPVLLCACNDNTLRLYDL 388
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +2
Query: 239 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTT 361
+L GH +S + L S + +GS D+TLR+WD A+G+ T
Sbjct: 146 QLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCT 186
Score = 34.3 bits (75), Expect = 0.079
Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 3/182 (1%)
Frame = +2
Query: 74 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 253
E+ L L GH V+ IA P D + + S+D+TL VW + G+ +L G
Sbjct: 139 ESFALLTQLDGHEKLVSGIAL-PSGSDKLYTGSKDETLRVWDCASGQCT-GV--LKLGGE 194
Query: 254 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 433
I V+ S+G + L G ++ W++ + V S+ D + +
Sbjct: 195 ---IGCVL--SEGPWLLVGM-PNLVKAWNIETN-ADQSLSGPVGQVYSLVVGTD--LLFA 245
Query: 434 GSRDKTIKLW--NTLAEC-KYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 604
G++D +I W N C + + GH+ V + N + S D+T+KVW L
Sbjct: 246 GTQDGSILAWRYNAATNCFEPSASLTGHTLAVVTLYVGANR----LYSGSMDKTIKVWSL 301
Query: 605 TN 610
N
Sbjct: 302 DN 303
Score = 29.1 bits (62), Expect = 3.0
Identities = 24/106 (22%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Frame = +2
Query: 365 RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA-ECKYTIQDDGHSDWVSCVRFSP 541
+ + H K V +A + ++ +GS+D+T+++W+ + +C ++ G + CV
Sbjct: 146 QLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCTGVLKLGGE---IGCVL--- 199
Query: 542 NHANPIIVSCGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPD 676
P ++ G VK W++ TN ++ G G + ++ V D
Sbjct: 200 -SEGPWLL-VGMPNLVKAWNIETNADQSLS--GPVGQVYSLVVGTD 241
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 55.2 bits (127), Expect = 4e-08
Identities = 42/155 (27%), Positives = 67/155 (43%), Gaps = 5/155 (3%)
Frame = +2
Query: 251 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 430
H +S + L+ D SGSWDKTL++W L+ K E H V +V D+ +
Sbjct: 244 HFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNTVVSGFDD-LVF 302
Query: 431 SGSRDKTIKLWNTLA---ECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 601
+GS D T+K+W E K+ + + + N + ++ D TV W
Sbjct: 303 TGSADGTLKVWKREVQGKEMKHVLVQVLMKQENAVTALAVNLTDAVVYCGSSDGTVNFWE 362
Query: 602 LTNCKLKINHLG--HSGYLNTVTVSPDGSLCASGG 700
+ + H G H + + ++ GSL SGG
Sbjct: 363 R---QKYLTHKGTIHGHRMAVLCLATAGSLLLSGG 394
Score = 41.5 bits (93), Expect = 5e-04
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 6/154 (3%)
Frame = +2
Query: 155 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 334
++ S S DKTL VW+L+ + + + H ++ VV D + +GS D TL++
Sbjct: 259 LLYSGSWDKTLKVWRLSDSK-----CLESIEAHDDAVNTVVSGFD-DLVFTGSADGTLKV 312
Query: 335 WDL-AAGKTTRR-----FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQ 496
W GK + V ++A ++ + + GS D T+ W +
Sbjct: 313 WKREVQGKEMKHVLVQVLMKQENAVTALAVNLTDAVVYCGSSDGTVNFWERQKYLTHKGT 372
Query: 497 DDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 598
GH V C+ A +++S G D+ + VW
Sbjct: 373 IHGHRMAVLCLA----TAGSLLLSGGADKNICVW 402
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 54.8 bits (126), Expect = 5e-08
Identities = 60/209 (28%), Positives = 93/209 (44%), Gaps = 8/209 (3%)
Frame = +2
Query: 98 LRGHNGWVTQIA---TNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY----GHS 256
L GH+G ++ +A +N + ++S+D+TL ++K E+ + R Y GH
Sbjct: 146 LEGHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHK 205
Query: 257 HFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSG 436
+ V GN S SWD T+ LW+ + T + SV SV R+ G
Sbjct: 206 ASVQSVSAQKSGNMVCSSSWDCTINLWNT---------NESTSEGESV--SVKKRK---G 251
Query: 437 SRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCK 616
+ + +E + GH+ VS V + P H +I S WD +V+ W + K
Sbjct: 252 NNQAE----ESQSEGEAVTSLVGHTQCVSSVVW-PEH--DVIYSSSWDHSVRRWDVETGK 304
Query: 617 LKINHLGHSGYLNTVTVSPDGS-LCASGG 700
+N L LNTV V + S L A+GG
Sbjct: 305 DSLN-LFCGKALNTVDVGGESSALIAAGG 332
Score = 51.2 bits (117), Expect = 6e-07
Identities = 52/210 (24%), Positives = 85/210 (40%), Gaps = 25/210 (11%)
Frame = +2
Query: 50 FKPFSKMSETLKLRG--TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT------ 205
F P + T K+R LRGH V ++ K +M+ SSS D T+ +W
Sbjct: 183 FDPAESVDSTTKVRAYKILRGHKASVQSVSAQ-KSGNMVCSSSWDCTINLWNTNESTSEG 241
Query: 206 -------RDENNY-------GIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 343
R NN G L GH+ +S VV + + S SWD ++R WD+
Sbjct: 242 ESVSVKKRKGNNQAEESQSEGEAVTSLVGHTQCVSSVVWP-EHDVIYSSSWDHSVRRWDV 300
Query: 344 AAGK-TTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL--AECKYTIQDDGHSD 514
GK + F + + V + I +G D +++W+ Q HS
Sbjct: 301 ETGKDSLNLFCGKALNTVDVG-GESSALIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSS 359
Query: 515 WVSCVRFSPNHANPIIVSCGWDRTVKVWHL 604
W+S ++ + ++ S +D + +W L
Sbjct: 360 WISACKWHKSSWFHLL-SASYDGKIMLWDL 388
Score = 36.3 bits (80), Expect = 0.020
Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 13/130 (10%)
Frame = +2
Query: 251 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ-- 424
H ++S V S + L+G +D R+W +AG + E H+ + SVA N
Sbjct: 109 HDDWVS-AVNGSSPRFILTGCYDGLGRVWS-SAGSCSHILEGHSGAISSVALVNSNDAET 166
Query: 425 --IVSGSRDKTIKLW---------NTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSC 571
+ + S+D+T++L+ +T Y I GH V V S + ++ S
Sbjct: 167 VTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILR-GHKASVQSV--SAQKSGNMVCSS 223
Query: 572 GWDRTVKVWH 601
WD T+ +W+
Sbjct: 224 SWDCTINLWN 233
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 54.8 bits (126), Expect = 5e-08
Identities = 60/209 (28%), Positives = 93/209 (44%), Gaps = 8/209 (3%)
Frame = +2
Query: 98 LRGHNGWVTQIA---TNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY----GHS 256
L GH+G ++ +A +N + ++S+D+TL ++K E+ + R Y GH
Sbjct: 146 LEGHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHK 205
Query: 257 HFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSG 436
+ V GN S SWD T+ LW+ + T + SV SV R+ G
Sbjct: 206 ASVQSVSAQKSGNMVCSSSWDCTINLWNT---------NESTSEGESV--SVKKRK---G 251
Query: 437 SRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCK 616
+ + +E + GH+ VS V + P H +I S WD +V+ W + K
Sbjct: 252 NNQAE----ESQSEGEAVTSLVGHTQCVSSVVW-PEH--DVIYSSSWDHSVRRWDVETGK 304
Query: 617 LKINHLGHSGYLNTVTVSPDGS-LCASGG 700
+N L LNTV V + S L A+GG
Sbjct: 305 DSLN-LFCGKALNTVDVGGESSALIAAGG 332
Score = 51.2 bits (117), Expect = 6e-07
Identities = 52/210 (24%), Positives = 85/210 (40%), Gaps = 25/210 (11%)
Frame = +2
Query: 50 FKPFSKMSETLKLRG--TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT------ 205
F P + T K+R LRGH V ++ K +M+ SSS D T+ +W
Sbjct: 183 FDPAESVDSTTKVRAYKILRGHKASVQSVSAQ-KSGNMVCSSSWDCTINLWNTNESTSEG 241
Query: 206 -------RDENNY-------GIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 343
R NN G L GH+ +S VV + + S SWD ++R WD+
Sbjct: 242 ESVSVKKRKGNNQAEESQSEGEAVTSLVGHTQCVSSVVWP-EHDVIYSSSWDHSVRRWDV 300
Query: 344 AAGK-TTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL--AECKYTIQDDGHSD 514
GK + F + + V + I +G D +++W+ Q HS
Sbjct: 301 ETGKDSLNLFCGKALNTVDVG-GESSALIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSS 359
Query: 515 WVSCVRFSPNHANPIIVSCGWDRTVKVWHL 604
W+S ++ + ++ S +D + +W L
Sbjct: 360 WISACKWHKSSWFHLL-SASYDGKIMLWDL 388
Score = 36.3 bits (80), Expect = 0.020
Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 13/130 (10%)
Frame = +2
Query: 251 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ-- 424
H ++S V S + L+G +D R+W +AG + E H+ + SVA N
Sbjct: 109 HDDWVS-AVNGSSPRFILTGCYDGLGRVWS-SAGSCSHILEGHSGAISSVALVNSNDAET 166
Query: 425 --IVSGSRDKTIKLW---------NTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSC 571
+ + S+D+T++L+ +T Y I GH V V S + ++ S
Sbjct: 167 VTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILR-GHKASVQSV--SAQKSGNMVCSS 223
Query: 572 GWDRTVKVWH 601
WD T+ +W+
Sbjct: 224 SWDCTINLWN 233
Score = 34.3 bits (75), Expect = 0.079
Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 1/108 (0%)
Frame = +2
Query: 155 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL-SSDGNYALSGSWDKTLR 331
+I + D L VW + + P + HS +IS S + LS S+D +
Sbjct: 327 LIAAGGSDPILRVWDPRKPGTS--APVFQFSSHSSWISACKWHKSSWFHLLSASYDGKIM 384
Query: 332 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 475
LWDL + H VLS + +VSG D +++ + +A
Sbjct: 385 LWDLRTAWPLSVIDTHNDKVLSADW-WKGESVVSGGADSNLRISSGIA 431
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 54.8 bits (126), Expect = 5e-08
Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 4/205 (1%)
Frame = +2
Query: 95 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 274
T+ GH V +A ++ S SRDK+++ + E++ +L GH + +
Sbjct: 289 TMEGHRLRVGALAWGSS---VLSSGSRDKSILQRDIRCQEDHVS----KLAGHKSEVCGL 341
Query: 275 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS---GSRD 445
S D SG D L +W+ + + ++ +HT V ++A+S +++ G+ D
Sbjct: 342 KWSYDNRELASGGNDNRLFVWNQHSTQPVLKYSEHTAAVKAIAWSPHVHGLLASGGGTAD 401
Query: 446 KTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRT-VKVWHLTNCKLK 622
+ I+ WNT + D V + +S N N ++ + G+ + + VW
Sbjct: 402 RCIRFWNTTTNTHLSSIDT--CSQVCNLAWSKN-VNELVSTHGYSQNQIIVWKYPTMSKI 458
Query: 623 INHLGHSGYLNTVTVSPDGSLCASG 697
GH+ + + VSPDG +G
Sbjct: 459 ATLTGHTYRVLYLAVSPDGQTIVTG 483
Score = 45.2 bits (102), Expect = 4e-05
Identities = 36/138 (26%), Positives = 66/138 (47%), Gaps = 1/138 (0%)
Frame = +2
Query: 290 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 469
G + G+ +++WD + K TR E H V ++A+ + + SGSRDK+I +
Sbjct: 264 GTHLAVGTSTGKVQIWDASRCKRTRTMEGHRLRVGALAWG--SSVLSSGSRDKSILQRDI 321
Query: 470 LAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGY 649
+ + + GH V +++S + N + S G D + VW+ + + + + H+
Sbjct: 322 RCQEDHVSKLAGHKSEVCGLKWS--YDNRELASGGNDNRLFVWNQHSTQPVLKYSEHTAA 379
Query: 650 LNTVTVSPD-GSLCASGG 700
+ + SP L ASGG
Sbjct: 380 VKAIAWSPHVHGLLASGG 397
Score = 34.3 bits (75), Expect = 0.079
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 377 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 484
HT VL +A S D + IV+G+ D+T++ WN K
Sbjct: 464 HTYRVLYLAVSPDGQTIVTGAGDETLRFWNVFPSPK 499
Score = 31.9 bits (69), Expect = 0.42
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +2
Query: 242 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 343
L GH++ + + +S DG ++G+ D+TLR W++
Sbjct: 461 LTGHTYRVLYLAVSPDGQTIVTGAGDETLRFWNV 494
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 54.8 bits (126), Expect = 5e-08
Identities = 30/104 (28%), Positives = 60/104 (57%)
Frame = +2
Query: 368 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNH 547
F+ H DVL +A+S ++ ++S S DKT++LWN ++ ++ HSD+V+C++F+P
Sbjct: 509 FQGHVDDVLDLAWS-KSQHLLSSSMDKTVRLWNLSSQT--CLKVFSHSDYVTCIQFNPVD 565
Query: 548 ANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDG 679
+ +S D V+VW + + ++ ++ + + +PDG
Sbjct: 566 -DRYFISGSLDAKVRVWSIPDRQV-VDWYDLHEMVTSACYTPDG 607
Score = 50.0 bits (114), Expect = 1e-06
Identities = 29/99 (29%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Frame = +2
Query: 179 KTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV--LSSDGNYALSGSWDKTLRLWDLAAG 352
K+L + + ++ +G+ +K + DV+ S + LS S DKT+RLW+L++
Sbjct: 485 KSLSLENIFVPDSLFGLSEKPFCSFQGHVDDVLDLAWSKSQHLLSSSMDKTVRLWNLSS- 543
Query: 353 KTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWN 466
+T + H+ V + F+ VD+R +SGS D +++W+
Sbjct: 544 QTCLKVFSHSDYVTCIQFNPVDDRYFISGSLDAKVRVWS 582
Score = 46.8 bits (106), Expect = 1e-05
Identities = 47/226 (20%), Positives = 105/226 (46%), Gaps = 9/226 (3%)
Frame = +2
Query: 44 SLFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNY 223
++F P S + K + +GH V +A + +LSSS DKT+ +W L+
Sbjct: 491 NIFVPDSLFGLSEKPFCSFQGHVDDVLDLAWSKS--QHLLSSSMDKTVRLWNLSSQ---- 544
Query: 224 GIPQKRLYGHSHFISDVVLSS-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSV 400
+++ HS +++ + + D Y +SGS D +R+W + + ++ H + V S
Sbjct: 545 --TCLKVFSHSDYVTCIQFNPVDDRYFISGSLDAKVRVWSIPDRQVVDWYDLH-EMVTSA 601
Query: 401 AFSVDNRQIVSGSRDKTIKLW----NTLAE-CKYTIQD---DGHSDWVSCVRFSPNHANP 556
++ D + ++ GS + +++ N L + + +Q+ H ++ +F P ++
Sbjct: 602 CYTPDGQGVLVGSYKGSCRMYSASDNKLQQKSQINLQNKKKKAHQKKITGFQFVPGSSSE 661
Query: 557 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCAS 694
++V+ D ++V T+ K+ ++ + +++ DG S
Sbjct: 662 VLVTSS-DSRIRVVDGTDLVNKLKGFRNTSSQISASITADGKYVVS 706
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 54.8 bits (126), Expect = 5e-08
Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 4/190 (2%)
Frame = +2
Query: 119 VTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNY 298
++ ++ +P+ D+++++S D + W+++R + K H + DG
Sbjct: 28 ISSLSFSPR-ADILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDDGTT 86
Query: 299 ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 478
SG DK ++W L +G H + ++A+ + +GS DKT+K W+T
Sbjct: 87 VFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLATGSWDKTLKYWDTRQ- 145
Query: 479 CKYTIQDDGHSDWV--SCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYL 652
Q+ H+ + C S H P++V DR + V++L N + + +
Sbjct: 146 -----QNPVHTQQLPDKCYTLSVKH--PLMVVGTADRNLIVFNLQNPQTEFKRIQSPLKY 198
Query: 653 NT--VTVSPD 676
T VT PD
Sbjct: 199 QTRCVTAFPD 208
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 54.8 bits (126), Expect = 5e-08
Identities = 47/188 (25%), Positives = 88/188 (46%), Gaps = 9/188 (4%)
Frame = +2
Query: 80 LKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSH 259
L+ + +++ H+ V IA + + + S D+ + VW E + + L H
Sbjct: 225 LRCKESIKAHDDAVNAIAVSTN--GTVYTGSADRRIRVWAKPTGEKRHTLVAT-LEKHKS 281
Query: 260 FISDVVLSSDGNYALSGSWDKTLRLW---DLAAGKTTR-RFEDHTKDVLSVAFSVDNRQI 427
++ + L+ DG+ SGS D+++ +W D + R H K +LS+ F+V + +
Sbjct: 282 AVNALALNDDGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAILSL-FNVSD-LL 339
Query: 428 VSGSRDKTIKLWNTLAECKYTIQD--DGHSDWV---SCVRFSPNHANPIIVSCGWDRTVK 592
+SGS D+T+++W + Y+ + GH+ V + VR I+S D VK
Sbjct: 340 LSGSADRTVRIWRRGPDSSYSCLEVLSGHTKPVKSLAAVREKELDDVVSIISGSLDGEVK 399
Query: 593 VWHLTNCK 616
W ++ K
Sbjct: 400 CWKVSVTK 407
Score = 47.6 bits (108), Expect = 8e-06
Identities = 35/126 (27%), Positives = 65/126 (51%), Gaps = 4/126 (3%)
Frame = +2
Query: 233 QKRLY-GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 409
+KRL+ H+ ++ + +S DG + S SWDKTL++W + + + H V ++A S
Sbjct: 187 KKRLWIEHADAVTALAVS-DG-FIYSVSWDKTLKIWRASDLRCKESIKAHDDAVNAIAVS 244
Query: 410 VDNRQIVSGSRDKTIKLW-NTLAECKYTIQD--DGHSDWVSCVRFSPNHANPIIVSCGWD 580
N + +GS D+ I++W E ++T+ + H V+ + N ++ S D
Sbjct: 245 T-NGTVYTGSADRRIRVWAKPTGEKRHTLVATLEKHKSAVNALAL--NDDGSVLFSGSCD 301
Query: 581 RTVKVW 598
R++ VW
Sbjct: 302 RSILVW 307
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +2
Query: 506 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSL 685
H+D V+ + S I S WD+T+K+W ++ + K + H +N + VS +G++
Sbjct: 194 HADAVTALAVSDG----FIYSVSWDKTLKIWRASDLRCKESIKAHDDAVNAIAVSTNGTV 249
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 54.4 bits (125), Expect = 7e-08
Identities = 37/123 (30%), Positives = 63/123 (51%), Gaps = 4/123 (3%)
Frame = +2
Query: 248 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN-RQ 424
G+S I V S+DG ++GS D ++ ++DL A + + R HT DV +V F+ ++
Sbjct: 227 GYSFGIFSVKFSTDGREVVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNL 286
Query: 425 IVSGSRDKTIKLWNT---LAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKV 595
I+SGS D K+W+ + K GH + V+ + +S G D+T+K+
Sbjct: 287 ILSGSDDNLCKVWDRRCFIGRDKPAGVLVGHLEGVTFI--DSRGDGRYFISNGKDQTIKL 344
Query: 596 WHL 604
W +
Sbjct: 345 WDI 347
Score = 37.1 bits (82), Expect = 0.011
Identities = 23/79 (29%), Positives = 35/79 (44%)
Frame = +2
Query: 107 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS 286
H V + + ++ILS S D VW R P L GH ++ +
Sbjct: 270 HTSDVNTVCFADESGNLILSGSDDNLCKVWD-RRCFIGRDKPAGVLVGHLEGVTFIDSRG 328
Query: 287 DGNYALSGSWDKTLRLWDL 343
DG Y +S D+T++LWD+
Sbjct: 329 DGRYFISNGKDQTIKLWDI 347
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 54.4 bits (125), Expect = 7e-08
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 2/109 (1%)
Frame = +2
Query: 155 MILSSSRDKTLIVWK--LTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTL 328
M+++++ T VW+ R P +L H+ I +LS Y + S DKT+
Sbjct: 182 MVVAANDRGTCYVWRSLCERQTMTEFEPLHKLQAHNSHILKCLLSPGNKYLATASSDKTV 241
Query: 329 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 475
++W+L K + H + V FS+D +V+ S D T +LW+ A
Sbjct: 242 KIWNLDGFKLEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRA 290
Score = 54.0 bits (124), Expect = 9e-08
Identities = 31/96 (32%), Positives = 50/96 (52%)
Frame = +2
Query: 98 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 277
L+ HN + + +P + +SS DKT+ +W L + + + +K L GH ++ D
Sbjct: 213 LQAHNSHILKCLLSPGNKYLATASS-DKTVKIWNL----DGFKL-EKVLTGHERWVWDCD 266
Query: 278 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 385
S DG Y ++ S D T RLW + AGK ++ H K
Sbjct: 267 FSMDGEYLVTASSDTTARLWSMRAGKEEMVYQAHRK 302
Score = 45.2 bits (102), Expect = 4e-05
Identities = 42/182 (23%), Positives = 76/182 (41%), Gaps = 7/182 (3%)
Frame = +2
Query: 155 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 334
M+ S S D ++ +W L E +R + ++ VVL + +SG + +R+
Sbjct: 98 MMYSGSEDGSVKIWDLRVREC------QREFRSVSPVNTVVLHPNQTELISGDQNGNIRV 151
Query: 335 WDLAAGKTTRRFEDHT-KDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDD--- 502
WDL A + + S+ D +V+ + T +W +L E + + +
Sbjct: 152 WDLRADLCSCELVPEVGTPIRSLTVMWDGTMVVAANDRGTCYVWRSLCERQTMTEFEPLH 211
Query: 503 ---GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP 673
H+ + SP N + + D+TVK+W+L KL+ GH ++ S
Sbjct: 212 KLQAHNSHILKCLLSPG--NKYLATASSDKTVKIWNLDGFKLEKVLTGHERWVWDCDFSM 269
Query: 674 DG 679
DG
Sbjct: 270 DG 271
Score = 44.0 bits (99), Expect = 1e-04
Identities = 43/187 (22%), Positives = 88/187 (47%), Gaps = 8/187 (4%)
Frame = +2
Query: 149 PDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTL 328
P + ++S D+T+ +W+ + L+ ++ + L+ + L + + +
Sbjct: 10 PVYLATASHDQTIRLWQARTGRCYFSFRYPDLH-----VNRLELTPEKG-KLVAACNPHI 63
Query: 329 RLWDLAAGKT---TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQ 496
RL+DL + R F HTK+V++V F + SGS D ++K+W+ + EC+ +
Sbjct: 64 RLFDLRSYNPHIPVRNFVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQREFR 123
Query: 497 DDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW----HLTNCKLKINHLGHSGYLNTVT 664
V+ V PN ++S + ++VW L +C+L + +G + ++T
Sbjct: 124 SVSP---VNTVVLHPNQTE--LISGDQNGNIRVWDLRADLCSCEL-VPEVGTP--IRSLT 175
Query: 665 VSPDGSL 685
V DG++
Sbjct: 176 VMWDGTM 182
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 54.0 bits (124), Expect = 9e-08
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 1/136 (0%)
Frame = +2
Query: 152 DMILSSSRDKTLI-VWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTL 328
D S+ RD T V K ++N P R + I+ + S+DG Y + D L
Sbjct: 271 DSSFSAIRDPTQFSVDKAKYSKSN---PVARWHIGQGAINSIAFSNDGAYLATVGRDGYL 327
Query: 329 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 508
R++D + K + + +L A+S+D + +++G D +++W+ + + K +GH
Sbjct: 328 RIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLTGGEDDLVQVWS-MEDRKVVAWGEGH 386
Query: 509 SDWVSCVRFSPNHANP 556
+ WVS V F ++P
Sbjct: 387 NSWVSGVAFDSYWSSP 402
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 53.6 bits (123), Expect = 1e-07
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 4/205 (1%)
Frame = +2
Query: 95 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 274
T+ GH +A N + ++ S SRD+ ++ + R ++++ +L GH + +
Sbjct: 252 TMGGHQTRTGVLAWNSR---ILSSGSRDRNILQHDI-RVQSDF---VSKLVGHKSEVCGL 304
Query: 275 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS---GSRD 445
S D SG D L +W+ + + + +HT V ++ +S +++ G+ D
Sbjct: 305 KWSHDDRELASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWSPHQSSLLASGGGTAD 364
Query: 446 KTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRT-VKVWHLTNCKLK 622
+ I+ WNT + D G V + +S N N I+ + G+ + + +W +
Sbjct: 365 RCIRFWNTTNGNQLNSIDTGSQ--VCNLAWSKN-VNEIVSTHGYSQNQIMLWKYPSMSKV 421
Query: 623 INHLGHSGYLNTVTVSPDGSLCASG 697
GHS + + SPDG +G
Sbjct: 422 ATLTGHSMRVLYLATSPDGQTIVTG 446
Score = 35.9 bits (79), Expect = 0.026
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +2
Query: 326 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 484
+ LW + H+ VL +A S D + IV+G+ D+T++ WN K
Sbjct: 410 IMLWKYPSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNVFPSVK 462
Score = 30.7 bits (66), Expect = 0.98
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 242 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL 343
L GHS + + S DG ++G+ D+TLR W++
Sbjct: 424 LTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNV 457
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 53.6 bits (123), Expect = 1e-07
Identities = 46/140 (32%), Positives = 68/140 (48%), Gaps = 4/140 (2%)
Frame = +2
Query: 161 LSSSRDKTLIVWKLTRDENNYGIPQKRLY---GHSHFISDVVLSSDGNYALSGSWDKTLR 331
L S D T +V T + I +K L+ GH I D+ S G Y LS S D+T+R
Sbjct: 292 LRKSSDSTCVVLPPTI----FSISEKPLHEFKGHIGEILDLSWSEKG-YLLSSSVDETVR 346
Query: 332 LWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 508
LW + + R F H V VAF+ VD+ +SGS D +++W+ + C+ D
Sbjct: 347 LWRVGCDECLRTF-THNNFVTCVAFNPVDDNYFISGSIDGKVRIWD-VTRCRVVDYTD-I 403
Query: 509 SDWVSCVRFSPNHANPIIVS 568
D V+ V + P+ +I S
Sbjct: 404 RDIVTAVCYRPDAKGAVIGS 423
Score = 51.6 bits (118), Expect = 5e-07
Identities = 28/108 (25%), Positives = 57/108 (52%)
Frame = +2
Query: 353 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVR 532
K F+ H ++L +++S + ++S S D+T++LW C ++ H+++V+CV
Sbjct: 313 KPLHEFKGHIGEILDLSWS-EKGYLLSSSVDETVRLWRV--GCDECLRTFTHNNFVTCVA 369
Query: 533 FSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPD 676
F+P N +S D V++W +T C++ +++ + V PD
Sbjct: 370 FNPVDDN-YFISGSIDGKVRIWDVTRCRV-VDYTDIRDIVTAVCYRPD 415
Score = 48.4 bits (110), Expect = 5e-06
Identities = 34/114 (29%), Positives = 60/114 (52%), Gaps = 1/114 (0%)
Frame = +2
Query: 101 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 280
+GH G + ++ + K +LSSS D+T+ +W++ DE R + H++F++ V
Sbjct: 319 KGHIGEILDLSWSEK--GYLLSSSVDETVRLWRVGCDE------CLRTFTHNNFVTCVAF 370
Query: 281 SS-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 439
+ D NY +SGS D +R+WD+ + + D V +V + D + V GS
Sbjct: 371 NPVDDNYFISGSIDGKVRIWDVTRCRVV-DYTDIRDIVTAVCYRPDAKGAVIGS 423
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 53.6 bits (123), Expect = 1e-07
Identities = 46/140 (32%), Positives = 68/140 (48%), Gaps = 4/140 (2%)
Frame = +2
Query: 161 LSSSRDKTLIVWKLTRDENNYGIPQKRLY---GHSHFISDVVLSSDGNYALSGSWDKTLR 331
L S D T +V T + I +K L+ GH I D+ S G Y LS S D+T+R
Sbjct: 292 LRKSSDSTCVVLPPTI----FSISEKPLHEFKGHIGEILDLSWSEKG-YLLSSSVDETVR 346
Query: 332 LWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGH 508
LW + + R F H V VAF+ VD+ +SGS D +++W+ + C+ D
Sbjct: 347 LWRVGCDECLRTF-THNNFVTCVAFNPVDDNYFISGSIDGKVRIWD-VTRCRVVDYTD-I 403
Query: 509 SDWVSCVRFSPNHANPIIVS 568
D V+ V + P+ +I S
Sbjct: 404 RDIVTAVCYRPDAKGAVIGS 423
Score = 51.6 bits (118), Expect = 5e-07
Identities = 28/108 (25%), Positives = 57/108 (52%)
Frame = +2
Query: 353 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVR 532
K F+ H ++L +++S + ++S S D+T++LW C ++ H+++V+CV
Sbjct: 313 KPLHEFKGHIGEILDLSWS-EKGYLLSSSVDETVRLWRV--GCDECLRTFTHNNFVTCVA 369
Query: 533 FSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPD 676
F+P N +S D V++W +T C++ +++ + V PD
Sbjct: 370 FNPVDDN-YFISGSIDGKVRIWDVTRCRV-VDYTDIRDIVTAVCYRPD 415
Score = 48.4 bits (110), Expect = 5e-06
Identities = 34/114 (29%), Positives = 60/114 (52%), Gaps = 1/114 (0%)
Frame = +2
Query: 101 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 280
+GH G + ++ + K +LSSS D+T+ +W++ DE R + H++F++ V
Sbjct: 319 KGHIGEILDLSWSEK--GYLLSSSVDETVRLWRVGCDE------CLRTFTHNNFVTCVAF 370
Query: 281 SS-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 439
+ D NY +SGS D +R+WD+ + + D V +V + D + V GS
Sbjct: 371 NPVDDNYFISGSIDGKVRIWDVTRCRVV-DYTDIRDIVTAVCYRPDAKGAVIGS 423
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 52.8 bits (121), Expect = 2e-07
Identities = 46/181 (25%), Positives = 80/181 (44%), Gaps = 4/181 (2%)
Frame = +2
Query: 155 MILSSSRDKTLIVWKLTRDENNYGIPQ-KRLYGHSHFISDVVLSSDGNYALSGSWDKTLR 331
M+ + + +++VWK T D + L GHS ++ + G SGS DKT++
Sbjct: 224 MLFAGTSSGSILVWKATTDSESDPFKYLTSLEGHSGEVTCFAVG--GQMLYSGSVDKTIK 281
Query: 332 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHS 511
+WDL + + HT V S+ ++ ++S S D TIK+W +
Sbjct: 282 MWDLNTLQCIMTLKQHTGTVTSLL--CWDKCLISSSLDGTIKVWAYSENGILKVVQTRRQ 339
Query: 512 DWVSCVRFSPNH---ANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 682
+ S S H A PII + TV ++ L + + + + + + T+T+ P G
Sbjct: 340 EQSSVHALSGMHDAEAKPIIFCSYQNGTVGIFDLPSFQER-GRMFSTHTIATLTIGPQGL 398
Query: 683 L 685
L
Sbjct: 399 L 399
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 242 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 355
L GH+ + + L + S S D TLR+WD +G+
Sbjct: 127 LEGHNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQ 164
Score = 27.9 bits (59), Expect = 6.9
Identities = 26/109 (23%), Positives = 52/109 (47%), Gaps = 2/109 (1%)
Frame = +2
Query: 371 EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNH 547
E H K++ +A + ++ S S D T+++W+ +C ++I D + S + P
Sbjct: 128 EGHNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQCVHSINLDAEAG--SLISEGP-- 183
Query: 548 ANPIIVSCGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGSLCA 691
V G +K +++ T+ L + G G +N +T++ +G L A
Sbjct: 184 ----WVFLGLPNAIKAFNVQTSQDLHLQAAGVVGQVNAMTIA-NGMLFA 227
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/98 (26%), Positives = 52/98 (53%)
Frame = +2
Query: 263 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 442
I+ + S+DG + + D LR++D K + + +L ++S+D + I++G
Sbjct: 306 INSIAFSNDGAHLATVGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDGKYILTGGE 365
Query: 443 DKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 556
D +++W+ + + K +GH+ WVS V F N ++P
Sbjct: 366 DDLVQVWS-MEDRKVVAWGEGHNSWVSGVAFDSNWSSP 402
Score = 30.7 bits (66), Expect = 0.98
Identities = 24/102 (23%), Positives = 48/102 (47%)
Frame = +2
Query: 395 SVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCG 574
S+AFS D + + RD +++++ L + K + + C +S + I++ G
Sbjct: 308 SIAFSNDGAHLATVGRDGYLRIFDFLTQ-KLVCGGKSYYGALLCCSWSMD--GKYILTGG 364
Query: 575 WDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG 700
D V+VW + + K+ GH+ +++ V + S S G
Sbjct: 365 EDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSNWSSPNSDG 406
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 52.4 bits (120), Expect = 3e-07
Identities = 44/156 (28%), Positives = 82/156 (52%), Gaps = 3/156 (1%)
Frame = +2
Query: 110 NGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV-LS- 283
NG ++ +PK S SR K++ + + E +G+ +K + + DV+ LS
Sbjct: 419 NGSPEPVSMSPKRRGRT-SFSR-KSVSLDNVLVPEAVFGLSEKPVCSFVGHLDDVLDLSW 476
Query: 284 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKL 460
S + LS S DKT+RLWDL++ KT + H+ V + F+ VD+ +SGS D +++
Sbjct: 477 SKSQHLLSSSMDKTVRLWDLSS-KTCLKVFSHSDYVTCIQFNPVDDNYFISGSLDAKVRI 535
Query: 461 WNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVS 568
W ++ + + +D H + V+ ++P+ ++ S
Sbjct: 536 W-SIPDHQVVDWNDLH-EMVTAACYTPDGQGALVGS 569
Score = 29.9 bits (64), Expect = 1.7
Identities = 41/176 (23%), Positives = 75/176 (42%), Gaps = 22/176 (12%)
Frame = +2
Query: 236 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK------TTRRFEDHTKDVL- 394
+ + H I + S DG Y S D +++W + + + + ED + ++
Sbjct: 357 QEIQAHKGSIWSIKFSLDGRYLASAGEDCVIQIWKVVESERKGELLSMDKQEDGSINLFL 416
Query: 395 -------SVAFSVDNRQIVSGSRDKTIKLWNTLA-ECKYTIQDD------GHSDWVSCVR 532
V+ S R S SR K++ L N L E + + + GH D V +
Sbjct: 417 LANGSPEPVSMSPKRRGRTSFSR-KSVSLDNVLVPEAVFGLSEKPVCSFVGHLDDVLDLS 475
Query: 533 FSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASG 697
+S + ++S D+TV++W L++ K + HS Y+ + +P D + SG
Sbjct: 476 WSKSQH---LLSSSMDKTVRLWDLSS-KTCLKVFSHSDYVTCIQFNPVDDNYFISG 527
Score = 29.1 bits (62), Expect = 3.0
Identities = 23/94 (24%), Positives = 43/94 (45%)
Frame = +2
Query: 107 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS 286
H+ +VT I NP + +S S D + +W + ++ + L+ ++ +
Sbjct: 507 HSDYVTCIQFNPVDDNYFISGSLDAKVRIWSIP---DHQVVDWNDLH---EMVTAACYTP 560
Query: 287 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD 388
DG AL GS+ T L++ K +R E + K+
Sbjct: 561 DGQGALVGSYKGTCCLYNTHDNKLQQRREINLKN 594
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 52.4 bits (120), Expect = 3e-07
Identities = 33/124 (26%), Positives = 64/124 (51%), Gaps = 1/124 (0%)
Frame = +2
Query: 101 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 280
RGH G + ++ + K +LSSS D+T+ +W++ + R++ H F++ V
Sbjct: 360 RGHTGEILDLSWSEK--GFLLSSSVDETVRLWRVGSSDECI-----RVFSHKSFVTCVAF 412
Query: 281 SS-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 457
+ D NY +SGS D +R+WD++ + + D + V ++ + D + V GS +
Sbjct: 413 NPVDDNYFISGSIDGKVRIWDVSQFRVV-DYTDIRQIVTALCYRPDGKGAVVGSMTGECR 471
Query: 458 LWNT 469
++T
Sbjct: 472 FYHT 475
Score = 51.2 bits (117), Expect = 6e-07
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +2
Query: 230 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 409
PQ GH+ I D+ S G + LS S D+T+RLW + + R H V VAF+
Sbjct: 355 PQHEFRGHTGEILDLSWSEKG-FLLSSSVDETVRLWRVGSSDECIRVFSHKSFVTCVAFN 413
Query: 410 -VDNRQIVSGSRDKTIKLWN 466
VD+ +SGS D +++W+
Sbjct: 414 PVDDNYFISGSIDGKVRIWD 433
Score = 44.4 bits (100), Expect = 7e-05
Identities = 26/104 (25%), Positives = 54/104 (51%)
Frame = +2
Query: 368 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNH 547
F HT ++L +++S + ++S S D+T++LW + I+ H +V+CV F+P
Sbjct: 359 FRGHTGEILDLSWS-EKGFLLSSSVDETVRLWR-VGSSDECIRVFSHKSFVTCVAFNPVD 416
Query: 548 ANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDG 679
N +S D V++W ++ ++ +++ + + PDG
Sbjct: 417 DN-YFISGSIDGKVRIWDVSQFRV-VDYTDIRQIVTALCYRPDG 458
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 52.0 bits (119), Expect = 4e-07
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
Frame = +2
Query: 302 LSGSWDKTLRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-- 466
+SG DK +R+WD GK ++ ++ H KD+ S+ + D+ ++GS DKT KLW+
Sbjct: 164 VSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDMR 223
Query: 467 TLAECK-YTIQDDGHSDWVSCVRFSPNHANPIIVSCGWD---------RTVKVWHLTNCK 616
TL K YT V+ V SP N +++ G D R K K
Sbjct: 224 TLTLLKTYTTVVP-----VNAVSLSP-LLNHVVLGGGQDASAVTTTDHRAGKFEAKFYDK 277
Query: 617 LKINHL----GHSGYLNTVTVSPDGSLCASGG 700
+ + GH G +N + +PDG +SGG
Sbjct: 278 ILQEEIGGVKGHFGPINALAFNPDGKSFSSGG 309
Score = 41.1 bits (92), Expect = 7e-04
Identities = 54/215 (25%), Positives = 92/215 (42%), Gaps = 15/215 (6%)
Frame = +2
Query: 98 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 277
++GH +T + N + D++ S ++D T +W +N + R GH+ +
Sbjct: 6 MKGHERPLTFLRYN-REGDLLFSCAKDHTPTLWFA---DNGERLGTYR--GHNGAVWCCD 59
Query: 278 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 457
+S D + ++GS D+T +LWD+ +GK F+ SV F+V +R V + D +
Sbjct: 60 VSRDSSRLITGSADQTAKLWDVKSGKELFTFK-FNAPTRSVDFAVGDRLAVI-TTDHFVD 117
Query: 458 LWNTLAECKYTIQDDGHSDWVS-CVRFSP------NHA-----NPIIVSCGWDRTVKVWH 601
K +D D S V P N A N IVS G D+ +++W
Sbjct: 118 R-TAAIHVKRIAEDPEEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIWD 176
Query: 602 LTNCKL---KINHLGHSGYLNTVTVSPDGSLCASG 697
KL +GH + ++ + D S +G
Sbjct: 177 AETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTG 211
Score = 36.7 bits (81), Expect = 0.015
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Frame = +2
Query: 158 ILSSSRDKTLIVWKLTRDENNYGIPQK-RLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 334
I+S DK + +W E + Q GH I+ + ++D ++ L+GS DKT +L
Sbjct: 163 IVSGGEDKVIRIWDA---ETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKL 219
Query: 335 WDLAAGKTTRRFEDHTKDVLSVAFSVD---NRQIVSGSRD 445
WD+ +T + +T V A S+ N ++ G +D
Sbjct: 220 WDM---RTLTLLKTYTTVVPVNAVSLSPLLNHVVLGGGQD 256
Score = 30.7 bits (66), Expect = 0.98
Identities = 18/70 (25%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Frame = +2
Query: 416 NRQIVSGSRDKTIKLWN--TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTV 589
N+ IVSG DK I++W+ T K + ++ GH ++ + + + ++ ++ D+T
Sbjct: 160 NQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSH--FLTGSLDKTA 217
Query: 590 KVWHLTNCKL 619
K+W + L
Sbjct: 218 KLWDMRTLTL 227
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 52.0 bits (119), Expect = 4e-07
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
Frame = +2
Query: 302 LSGSWDKTLRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-- 466
+SG DK +R+WD GK ++ ++ H KD+ S+ + D+ ++GS DKT KLW+
Sbjct: 164 VSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWDMR 223
Query: 467 TLAECK-YTIQDDGHSDWVSCVRFSPNHANPIIVSCGWD---------RTVKVWHLTNCK 616
TL K YT V+ V SP N +++ G D R K K
Sbjct: 224 TLTLLKTYTTVVP-----VNAVSLSP-LLNHVVLGGGQDASAVTTTDHRAGKFEAKFYDK 277
Query: 617 LKINHL----GHSGYLNTVTVSPDGSLCASGG 700
+ + GH G +N + +PDG +SGG
Sbjct: 278 ILQEEIGGVKGHFGPINALAFNPDGKSFSSGG 309
Score = 41.1 bits (92), Expect = 7e-04
Identities = 54/215 (25%), Positives = 92/215 (42%), Gaps = 15/215 (6%)
Frame = +2
Query: 98 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 277
++GH +T + N + D++ S ++D T +W +N + R GH+ +
Sbjct: 6 MKGHERPLTFLRYN-REGDLLFSCAKDHTPTLWFA---DNGERLGTYR--GHNGAVWCCD 59
Query: 278 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 457
+S D + ++GS D+T +LWD+ +GK F+ SV F+V +R V + D +
Sbjct: 60 VSRDSSRLITGSADQTAKLWDVKSGKELFTFK-FNAPTRSVDFAVGDRLAVI-TTDHFVD 117
Query: 458 LWNTLAECKYTIQDDGHSDWVS-CVRFSP------NHA-----NPIIVSCGWDRTVKVWH 601
K +D D S V P N A N IVS G D+ +++W
Sbjct: 118 R-TAAIHVKRIAEDPEEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIWD 176
Query: 602 LTNCKL---KINHLGHSGYLNTVTVSPDGSLCASG 697
KL +GH + ++ + D S +G
Sbjct: 177 AETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTG 211
Score = 36.7 bits (81), Expect = 0.015
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Frame = +2
Query: 158 ILSSSRDKTLIVWKLTRDENNYGIPQK-RLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 334
I+S DK + +W E + Q GH I+ + ++D ++ L+GS DKT +L
Sbjct: 163 IVSGGEDKVIRIWDA---ETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKL 219
Query: 335 WDLAAGKTTRRFEDHTKDVLSVAFSVD---NRQIVSGSRD 445
WD+ +T + +T V A S+ N ++ G +D
Sbjct: 220 WDM---RTLTLLKTYTTVVPVNAVSLSPLLNHVVLGGGQD 256
Score = 30.7 bits (66), Expect = 0.98
Identities = 18/70 (25%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Frame = +2
Query: 416 NRQIVSGSRDKTIKLWN--TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTV 589
N+ IVSG DK I++W+ T K + ++ GH ++ + + + ++ ++ D+T
Sbjct: 160 NQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSH--FLTGSLDKTA 217
Query: 590 KVWHLTNCKL 619
K+W + L
Sbjct: 218 KLWDMRTLTL 227
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 52.0 bits (119), Expect = 4e-07
Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 2/136 (1%)
Frame = +2
Query: 293 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNT 469
N+ S ++ + +WD+ ++ +E+H K SV FS + +VSGS D +K+W T
Sbjct: 434 NHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCT 493
Query: 470 LAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKIN-HLGHSG 646
E I D ++ + CV+++P +N I V D + + L N ++ GH
Sbjct: 494 RQEAS-VINIDMKAN-ICCVKYNPGSSNYIAVGSA-DHHIHYYDLRNISQPLHVFSGHKK 550
Query: 647 YLNTVTVSPDGSLCAS 694
++ V + L ++
Sbjct: 551 AVSYVKFLSNNELASA 566
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/86 (30%), Positives = 38/86 (44%)
Frame = +2
Query: 209 DENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD 388
D N P GH +S V S+ A S S D TLRLWD+ R F HT +
Sbjct: 534 DLRNISQPLHVFSGHKKAVSYVKFLSNNELA-SASTDSTLRLWDVKDNLPVRTFRGHTNE 592
Query: 389 VLSVAFSVDNRQIVSGSRDKTIKLWN 466
V +V++ + GS + +++
Sbjct: 593 KNFVGLTVNSEYLACGSETNEVYVYH 618
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 51.6 bits (118), Expect = 5e-07
Identities = 24/71 (33%), Positives = 36/71 (50%)
Frame = +2
Query: 251 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 430
H +S + LS DG S SWD+TL++W K F + D ++ +N I
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSENGDIY 223
Query: 431 SGSRDKTIKLW 463
+GS D+ IK+W
Sbjct: 224 TGSSDQRIKVW 234
Score = 48.0 bits (109), Expect = 6e-06
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 16/165 (9%)
Frame = +2
Query: 158 ILSSSRDKTLIVWKLTRDENNYGIPQKR-----LYGHSHFISDVVLS-SDGNYALSGSWD 319
I + S D+ + VW+ +E N +K L H+ I+ + LS ++G+ SG D
Sbjct: 222 IYTGSSDQRIKVWRKNINEENVKKKRKHSLVAILSEHNSGINALALSGTNGSLLHSGGSD 281
Query: 320 KTLRLWDLAAGK---TTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA-ECKY 487
++ +W+ G HT+ VL +A D + SGS DKT++LW A +
Sbjct: 282 GSILVWERDDGGDIVVVGMLRGHTESVLCLAVVSDI--LCSGSADKTVRLWKCSAKDYSC 339
Query: 488 TIQDDGHSDWVSCVRFS------PNHANPIIVSCGWDRTVKVWHL 604
+GH V C+ + + A+ I S G D VKVW +
Sbjct: 340 LAMLEGHLGPVKCLTGAFRDSRKADEASYHIYSGGLDSQVKVWQV 384
Score = 44.4 bits (100), Expect = 7e-05
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 11/136 (8%)
Frame = +2
Query: 98 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 277
L HN + +A + ++ S D +++VW+ RD+ + L GH+ + +
Sbjct: 255 LSEHNSGINALALSGTNGSLLHSGGSDGSILVWE--RDDGGDIVVVGMLRGHTESVLCLA 312
Query: 278 LSSDGNYALSGSWDKTLRLWDLAAG--KTTRRFEDHTKDV--LSVAFSVDNRQ------- 424
+ SD SGS DKT+RLW +A E H V L+ AF D+R+
Sbjct: 313 VVSD--ILCSGSADKTVRLWKCSAKDYSCLAMLEGHLGPVKCLTGAFR-DSRKADEASYH 369
Query: 425 IVSGSRDKTIKLWNTL 472
I SG D +K+W L
Sbjct: 370 IYSGGLDSQVKVWQVL 385
Score = 37.9 bits (84), Expect = 0.006
Identities = 36/120 (30%), Positives = 54/120 (45%), Gaps = 12/120 (10%)
Frame = +2
Query: 377 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL-AECKYTIQDDGHSDWVSCVRFSPNHAN 553
H V +A S D + S S D+T+K+W T +C + + H D ++ V S N
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESF-TNAHDDAINAVALSENGD- 221
Query: 554 PIIVSCGWDRTVKVWHLT----NCKLKINH------LGHSGYLNTVTVS-PDGSLCASGG 700
I + D+ +KVW N K K H H+ +N + +S +GSL SGG
Sbjct: 222 --IYTGSSDQRIKVWRKNINEENVKKKRKHSLVAILSEHNSGINALALSGTNGSLLHSGG 279
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 51.6 bits (118), Expect = 5e-07
Identities = 31/115 (26%), Positives = 59/115 (51%)
Frame = +2
Query: 353 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVR 532
K F H+ D+L +++S +NR ++S S D +++LW C+ + H+++V+ V+
Sbjct: 347 KPLHEFLGHSGDILDISWSKNNR-LLSASVDNSVRLWQ--IGCEDCLGIFSHNNYVTSVQ 403
Query: 533 FSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASG 697
F+P + I S D V++W + C++ ++ G + V PDG G
Sbjct: 404 FNPVDDDHFI-SGSIDGKVRIWSASQCQV-VDWADARGIVTAVCYQPDGQAVIIG 456
Score = 46.0 bits (104), Expect = 2e-05
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Frame = +2
Query: 230 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 409
P GHS I D+ S + N LS S D ++RLW + F H V SV F+
Sbjct: 348 PLHEFLGHSGDILDISWSKN-NRLLSASVDNSVRLWQIGCEDCLGIFS-HNNYVTSVQFN 405
Query: 410 -VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPII 562
VD+ +SGS D +++W+ ++C+ D V+ V + P+ II
Sbjct: 406 PVDDDHFISGSIDGKVRIWSA-SQCQVVDWADARG-IVTAVCYQPDGQAVII 455
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 107 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 208
HN +VT + NP D +S S D + +W ++
Sbjct: 395 HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQ 428
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 51.6 bits (118), Expect = 5e-07
Identities = 31/115 (26%), Positives = 59/115 (51%)
Frame = +2
Query: 353 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVR 532
K F H+ D+L +++S +NR ++S S D +++LW C+ + H+++V+ V+
Sbjct: 347 KPLHEFLGHSGDILDISWSKNNR-LLSASVDNSVRLWQ--IGCEDCLGIFSHNNYVTSVQ 403
Query: 533 FSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASG 697
F+P + I S D V++W + C++ ++ G + V PDG G
Sbjct: 404 FNPVDDDHFI-SGSIDGKVRIWSASQCQV-VDWADARGIVTAVCYQPDGQAVIIG 456
Score = 46.0 bits (104), Expect = 2e-05
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Frame = +2
Query: 230 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 409
P GHS I D+ S + N LS S D ++RLW + F H V SV F+
Sbjct: 348 PLHEFLGHSGDILDISWSKN-NRLLSASVDNSVRLWQIGCEDCLGIFS-HNNYVTSVQFN 405
Query: 410 -VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPII 562
VD+ +SGS D +++W+ ++C+ D V+ V + P+ II
Sbjct: 406 PVDDDHFISGSIDGKVRIWSA-SQCQVVDWADARG-IVTAVCYQPDGQAVII 455
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 107 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 208
HN +VT + NP D +S S D + +W ++
Sbjct: 395 HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQ 428
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 51.6 bits (118), Expect = 5e-07
Identities = 40/134 (29%), Positives = 62/134 (46%), Gaps = 6/134 (4%)
Frame = +2
Query: 83 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 262
KL L GHN V + +P P ++ S S D + + + G + GH+ +
Sbjct: 191 KLLHQLEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHD-AEGKTLLG----SMSGHTSW 245
Query: 263 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF------SVDNRQ 424
+ V S DG +GS D+T+RLWDL + +H V SVAF V +
Sbjct: 246 VLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSVAFRPPGGTGVRAGR 305
Query: 425 IVSGSRDKTIKLWN 466
+ S S DK++ L++
Sbjct: 306 LASVSDDKSVSLYD 319
Score = 45.2 bits (102), Expect = 4e-05
Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Frame = +2
Query: 383 KDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPII 562
K VLSVA+S + +++ GS D TI +++ + K Q +GH+ V + FSP +P +
Sbjct: 159 KFVLSVAWSPNGKRLACGSMDGTICVFD-VDRSKLLHQLEGHNMPVRSLVFSP--VDPRV 215
Query: 563 VSCGWDRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASG 697
+ G D H K + + GH+ ++ +V SPDG A+G
Sbjct: 216 LFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATG 261
Score = 38.3 bits (85), Expect = 0.005
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 11/195 (5%)
Frame = +2
Query: 122 TQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYA 301
T + P ++L+ S D+T+ +W+ DE + + GHS ++ + G A
Sbjct: 21 TWVPATEDRPALLLTGSLDETVKLWR--PDELDL---VRTNTGHSLGVAALAAHPSGIIA 75
Query: 302 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI-VSGSRDKTIKLWNT--- 469
S S D +R++D+ T E +V + F + V+G ++KLW+T
Sbjct: 76 ASSSIDSFVRVFDVDTNATIAVLEAPPSEVWGMQFEPKGTILAVAGGSSASVKLWDTASW 135
Query: 470 -LAECKYTIQDDG--HSDWVSCVRFSPNHA---NPIIVSCG-WDRTVKVWHLTNCKLKIN 628
L + D SD S +F + A N ++CG D T+ V+ + KL
Sbjct: 136 RLISTLSIPRPDAPKPSDKTSSKKFVLSVAWSPNGKRLACGSMDGTICVFDVDRSKLLHQ 195
Query: 629 HLGHSGYLNTVTVSP 673
GH+ + ++ SP
Sbjct: 196 LEGHNMPVRSLVFSP 210
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 71 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 202
+E L G++ GH WV + +P I + S D+T+ +W L
Sbjct: 230 AEGKTLLGSMSGHTSWVLSVDASPD-GGAIATGSSDRTVRLWDL 272
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +2
Query: 497 DDGHSDWVSCVRFSP-NHANPIIVSCG-WDRTVKVWHLTNCKLKINHLGHSGYLNTVTVS 670
++ H D V + P P ++ G D TVK+W L + GHS + +
Sbjct: 10 ENAHEDSVWAATWVPATEDRPALLLTGSLDETVKLWRPDELDLVRTNTGHSLGVAALAAH 69
Query: 671 PDGSLCAS 694
P G + AS
Sbjct: 70 PSGIIAAS 77
Score = 27.5 bits (58), Expect = 9.1
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Frame = +2
Query: 425 IVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 604
+++GS D+T+KLW E + GHS V+ + P + I S D V+V+ +
Sbjct: 33 LLTGSLDETVKLWRP-DELDLVRTNTGHSLGVAALAAHP--SGIIAASSSIDSFVRVFDV 89
Query: 605 -TNCKLKINHLGHSGYLNTVTVSPDGSLCASGG 700
TN + + S + P G++ A G
Sbjct: 90 DTNATIAVLEAPPSEVWG-MQFEPKGTILAVAG 121
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 51.6 bits (118), Expect = 5e-07
Identities = 44/160 (27%), Positives = 70/160 (43%), Gaps = 8/160 (5%)
Frame = +2
Query: 35 RESSLFKPFSKMSETLKLRGT--LRGH-NGWVTQIATNPKYPDMILSSSRDKTLI-VWKL 202
+E S FK S + + + + G GH +G + +PK + S TL ++K
Sbjct: 125 KEFSAFKCNSGLVKAIVISGEKIFTGHQDGKIRVWKVSPKNQSLHKRSGTLPTLKDIFKA 184
Query: 203 TRDENNYGIPQKRLYG----HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF 370
+ NY +K H+ +S + L+ + S SWD+T+++W +A K
Sbjct: 185 SLKPRNYVEVKKHRTALWIKHADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESI 244
Query: 371 EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYT 490
H V SV S + SGS D T+K W + KYT
Sbjct: 245 PAHDDAVNSVV-STTEAIVFSGSADGTVKAWKRDQQGKYT 283
Score = 46.0 bits (104), Expect = 2e-05
Identities = 51/206 (24%), Positives = 87/206 (42%), Gaps = 2/206 (0%)
Frame = +2
Query: 86 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFI 265
L G+L G + +A D++ + S K + VWK ++ + + +S +
Sbjct: 88 LIGSLVREEGHIYSLAATK---DLLYTGSDSKNIRVWKNLKEFSAFKC-------NSGLV 137
Query: 266 SDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF--SVDNRQIVSGS 439
+V+S G +G D +R+W ++ + T L F S+ R V
Sbjct: 138 KAIVIS--GEKIFTGHQDGKIRVWKVSPKNQSLHKRSGTLPTLKDIFKASLKPRNYVEVK 195
Query: 440 RDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKL 619
+ +T LW H+D VSC+ S N ++ S WDRT+KVW + + K
Sbjct: 196 KHRTA-LWIK------------HADAVSCL--SLNDEQGLLYSASWDRTIKVWRIADSKC 240
Query: 620 KINHLGHSGYLNTVTVSPDGSLCASG 697
+ H +N+V VS ++ SG
Sbjct: 241 LESIPAHDDAVNSV-VSTTEAIVFSG 265
Score = 33.5 bits (73), Expect = 0.14
Identities = 38/137 (27%), Positives = 55/137 (40%), Gaps = 11/137 (8%)
Frame = +2
Query: 86 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFI 265
L TL VT +A + + SS D + W+ + N GI L GH +
Sbjct: 287 LMQTLTKQESAVTALAVSKNGAAVYFGSS-DGLVNFWEREKQLNYGGI----LKGHK--L 339
Query: 266 SDVVLSSDGNYALSGSWDKTLRLWDLAAGKTT--RRFEDHTKDVLSVAFSVDNRQ----- 424
+ + L G+ SGS DKT+ +W T HT V +A D
Sbjct: 340 AVLCLEVAGSLVFSGSADKTICVWKRDGNIHTCLSVLTGHTGPVKCLAVEADREASERRD 399
Query: 425 ----IVSGSRDKTIKLW 463
+ SGS DK++K+W
Sbjct: 400 KKWIVYSGSLDKSVKVW 416
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 51.2 bits (117), Expect = 6e-07
Identities = 56/203 (27%), Positives = 87/203 (42%), Gaps = 36/203 (17%)
Frame = +2
Query: 98 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK---LTR-------------DEN---- 217
L GH V +A NP +I S S DKT+ +W+ LTR D N
Sbjct: 16 LEGHTDRVWNVAWNPAADGVIASCSADKTVRIWEQSSLTRSWTCKLGHRLGSFDGNTCVW 75
Query: 218 -NYGIPQKR---LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK-----TTRRF 370
N+ + L GH + V ++ G+ + DK++ +W++ + T
Sbjct: 76 ENFATDSESVSVLRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIAVL 135
Query: 371 EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE-----CKYTIQD--DGHSDWVSCV 529
H++DV V + + S S D TIK+W + E C T+ + +GHS V +
Sbjct: 136 TGHSEDVKMVLWHPTMDVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVWSI 195
Query: 530 RFSPNHANPIIVSCGWDRTVKVW 598
F N A +V+C D VK+W
Sbjct: 196 SF--NAAGDKMVTCSDDLAVKIW 216
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 51.2 bits (117), Expect = 6e-07
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Frame = +2
Query: 302 LSGSWDKTLRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 466
+SG DK +R+WD GK ++ ++ H KD+ S+ + D+ ++GS DKT KLW+
Sbjct: 164 VSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWD 221
Score = 41.1 bits (92), Expect = 7e-04
Identities = 54/215 (25%), Positives = 92/215 (42%), Gaps = 15/215 (6%)
Frame = +2
Query: 98 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 277
++GH +T + N + D++ S ++D T +W +N + R GH+ +
Sbjct: 6 MKGHERPLTFLRYN-REGDLLFSCAKDHTPTLWFA---DNGERLGTYR--GHNGAVWCCD 59
Query: 278 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 457
+S D + ++GS D+T +LWD+ +GK F+ SV F+V +R V + D +
Sbjct: 60 VSRDSSRLITGSADQTAKLWDVKSGKELFTFK-FNAPTRSVDFAVGDRLAVI-TTDHFVD 117
Query: 458 LWNTLAECKYTIQDDGHSDWVS-CVRFSP------NHA-----NPIIVSCGWDRTVKVWH 601
K +D D S V P N A N IVS G D+ +++W
Sbjct: 118 R-TAAIHVKRIAEDPEEQDAESVLVLHCPDGKKRINRAVWGPLNQTIVSGGEDKVIRIWD 176
Query: 602 LTNCKL---KINHLGHSGYLNTVTVSPDGSLCASG 697
KL +GH + ++ + D S +G
Sbjct: 177 AETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTG 211
Score = 36.3 bits (80), Expect = 0.020
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +2
Query: 158 ILSSSRDKTLIVWKLTRDENNYGIPQK-RLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 334
I+S DK + +W E + Q GH I+ + ++D ++ L+GS DKT +L
Sbjct: 163 IVSGGEDKVIRIWDA---ETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKL 219
Query: 335 WDL 343
WD+
Sbjct: 220 WDM 222
Score = 30.7 bits (66), Expect = 0.98
Identities = 18/70 (25%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Frame = +2
Query: 416 NRQIVSGSRDKTIKLWN--TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTV 589
N+ IVSG DK I++W+ T K + ++ GH ++ + + + ++ ++ D+T
Sbjct: 160 NQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSH--FLTGSLDKTA 217
Query: 590 KVWHLTNCKL 619
K+W + L
Sbjct: 218 KLWDMRTLTL 227
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 51.2 bits (117), Expect = 6e-07
Identities = 33/127 (25%), Positives = 62/127 (48%), Gaps = 5/127 (3%)
Frame = +2
Query: 101 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF-ISDVV 277
+GH +T +P+ + +L+SS D +L +W + + + + +L ++
Sbjct: 275 KGHICGLTCGEWHPRTKETVLTSSEDGSLRIWDVNNFLSQTQVIKPKLARPGRVPVTTCA 334
Query: 278 LSSDGNYALSGSWDKTLRLWDLAAGKTTRR----FEDHTKDVLSVAFSVDNRQIVSGSRD 445
DG G D ++++W L G +R + HT D+ SV FS D R ++S S D
Sbjct: 335 WDRDGKRIAGGVGDGSIQIWSLKPGWGSRPDIYVGKAHTDDITSVKFSSDGRILLSRSFD 394
Query: 446 KTIKLWN 466
++K+W+
Sbjct: 395 GSLKVWD 401
Score = 41.5 bits (93), Expect = 5e-04
Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 19/153 (12%)
Frame = +2
Query: 209 DENNYGIP---QKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL----AAGKTTRR 367
+EN Y IP + +L GH+ +S + + S G LSGS+D T+R++D + ++ R+
Sbjct: 159 EENRYQIPLSNEIQLKGHTKIVSSLAVDSAGARVLSGSYDYTVRMYDFQGMNSRLQSFRQ 218
Query: 368 FE-DHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN----TLAEC---KYTIQD----DGHS 511
E V SV++S + Q + + K+++ TL E I+D GH
Sbjct: 219 IEPSEGHQVRSVSWSPTSGQFLCVTGSAQAKIFDRDGLTLGEFMKGDMYIRDLKNTKGHI 278
Query: 512 DWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTN 610
++C + P ++ S D ++++W + N
Sbjct: 279 CGLTCGEWHPRTKETVLTS-SEDGSLRIWDVNN 310
Score = 39.5 bits (88), Expect = 0.002
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 3/112 (2%)
Frame = +2
Query: 251 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR-FE--DHTKDVLSVAFSVDNR 421
H+ I+ V SSDG LS S+D +L++WDL K + FE + +VAFS D +
Sbjct: 372 HTDDITSVKFSSDGRILLSRSFDGSLKVWDLRQMKEALKVFEGLPNYYPQTNVAFSPDEQ 431
Query: 422 QIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGW 577
I++G+ + L C Y D + V V SP + +V C W
Sbjct: 432 IILTGTSVEKDSTTGGLL-CFY---DRTKLEIVQKVGISPTSS---VVQCAW 476
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 50.8 bits (116), Expect = 9e-07
Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 1/141 (0%)
Frame = +2
Query: 65 KMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIP-QKR 241
K ++ + +L H V I +P +++ S + L +WKL E N K
Sbjct: 49 KKVPSVSYQSSLTYHGCAVNTIRFSPS-GELLASGADGGELFIWKLHPSETNQSWKVHKS 107
Query: 242 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 421
L H + D+ S D Y +SGS D + +WD+ G + + H V VA+ +
Sbjct: 108 LSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAK 167
Query: 422 QIVSGSRDKTIKLWNTLAECK 484
+ S S D+T +++ + K
Sbjct: 168 YVASLSSDRTCRIYANKPQTK 188
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 50.8 bits (116), Expect = 9e-07
Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 1/141 (0%)
Frame = +2
Query: 65 KMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIP-QKR 241
K ++ + +L H V I +P +++ S + L +WKL E N K
Sbjct: 49 KKVPSVSYQSSLTYHGCAVNTIRFSPS-GELLASGADGGELFIWKLHPSETNQSWKVHKS 107
Query: 242 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 421
L H + D+ S D Y +SGS D + +WD+ G + + H V VA+ +
Sbjct: 108 LSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAK 167
Query: 422 QIVSGSRDKTIKLWNTLAECK 484
+ S S D+T +++ + K
Sbjct: 168 YVASLSSDRTCRIYANKPQTK 188
>At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
myosin heavy chain kinase B (SP:P90648)(GI:1903458)
[Dictyostelium discoideum]
Length = 415
Score = 50.8 bits (116), Expect = 9e-07
Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 12/124 (9%)
Frame = +2
Query: 263 ISDVVLSSDGNYALSGS-------WDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 421
++ VV+S DGN+ G W+K + D + H VL + V
Sbjct: 272 VNSVVVSGDGNWVYGGGSDGFVIGWEKKEKEGDFEEWRLGFETRGHNMAVLCMC--VVGE 329
Query: 422 QIVSGSRDKTIKLWN---TLAECKYTIQDDGHSDWVSCVRFSPNH--ANPIIVSCGWDRT 586
+ SGS DK+I LW T CK+ + GH V C++ SPN+ A ++ S G D++
Sbjct: 330 MVCSGSADKSIGLWRREVTGMLCKFGV-IHGHEGPVKCLQASPNNVGAGFMLYSGGLDKS 388
Query: 587 VKVW 598
++VW
Sbjct: 389 LRVW 392
Score = 40.3 bits (90), Expect = 0.001
Identities = 26/76 (34%), Positives = 38/76 (50%)
Frame = +2
Query: 236 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 415
KRL+ H S L+ SGSWDKTL++W L+ K + H D ++ + D
Sbjct: 167 KRLW-IEHADSISCLAVHAGIIYSGSWDKTLKVWRLSDLKCLESIKAH-DDAINGLVAGD 224
Query: 416 NRQIVSGSRDKTIKLW 463
R + S S D +K+W
Sbjct: 225 GR-VYSASADGKVKIW 239
Score = 38.7 bits (86), Expect = 0.004
Identities = 54/199 (27%), Positives = 88/199 (44%), Gaps = 5/199 (2%)
Frame = +2
Query: 98 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 277
L H G V+ +A ++ +LS+S+ K +IVW+ + + I K G S
Sbjct: 57 LSAHVGSVSSLALCGEF---LLSASQGKDIIVWQ----QPDLKIFAKFGQGDG---SVKA 106
Query: 278 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE-----DHTKDVLSVAFSVDNRQIVSGSR 442
L S G+ + D +R+W ++ + F TKD L F + + +
Sbjct: 107 LVSVGSKVFTAHQDSRIRVWKVSRRNSENAFRLVDTLPTTKDYLG-KFMKQSNYVQTRRN 165
Query: 443 DKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLK 622
K +LW I+ H+D +SC+ HA II S WD+T+KVW L++ K
Sbjct: 166 HK--RLW---------IE---HADSISCLAV---HAG-IIYSGSWDKTLKVWRLSDLKCL 207
Query: 623 INHLGHSGYLNTVTVSPDG 679
+ H +N + V+ DG
Sbjct: 208 ESIKAHDDAINGL-VAGDG 225
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 50.8 bits (116), Expect = 9e-07
Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 2/118 (1%)
Frame = +2
Query: 251 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 430
H +S + LS DG+ S SWD++ ++W + K E D ++ + +
Sbjct: 191 HVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVSKDGFVY 250
Query: 431 SGSRDKTIKLWNTLAECKYTIQD--DGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 598
+GS DK IK+WN + K+++ H V+ + S + ++ S DR++ VW
Sbjct: 251 TGSADKKIKVWNK-KDKKHSLVATLTKHLSAVNALAISED--GKVLYSGACDRSILVW 305
Score = 39.5 bits (88), Expect = 0.002
Identities = 42/167 (25%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Frame = +2
Query: 158 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 337
+ + S DK + VW +D+ + + L H ++ + +S DG SG+ D+++ +W
Sbjct: 249 VYTGSADKKIKVWN-KKDKKHSLVAT--LTKHLSAVNALAISEDGKVLYSGACDRSILVW 305
Query: 338 D-LAAG-------KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT-LAECK-Y 487
+ L G H K ++ +A + D ++SGS DK++++W L E + Y
Sbjct: 306 ERLINGDDEELHMSVVGALRGHRKAIMCLAVASD--LVLSGSADKSLRVWRRGLMEKEGY 363
Query: 488 TIQD--DGHSDWVS--CVRFSPNHANP----IIVSCGWDRTVKVWHL 604
+ +GH+ V V S + +N ++ S D ++KVW+L
Sbjct: 364 SCLAVLEGHTKPVKSLAVSVSDSDSNSDYSCMVYSGSLDLSLKVWNL 410
Score = 37.5 bits (83), Expect = 0.009
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Frame = +2
Query: 92 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISD 271
G LRGH + +A D++LS S DK+L VW+ E L GH+ +
Sbjct: 322 GALRGHRKAIMCLAVAS---DLVLSGSADKSLRVWRRGLMEKEGYSCLAVLEGHTKPVKS 378
Query: 272 VVLS---SDGN-----YALSGSWDKTLRLWDL 343
+ +S SD N SGS D +L++W+L
Sbjct: 379 LAVSVSDSDSNSDYSCMVYSGSLDLSLKVWNL 410
Score = 35.5 bits (78), Expect = 0.034
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +2
Query: 506 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCK-LKINHLGHSGYLNTVTVSPDG 679
H D VS + S + + ++ S WDR+ K+W ++ K L H +N + VS DG
Sbjct: 191 HVDAVSSLALSQDGS--LLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVSKDG 247
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/80 (32%), Positives = 42/80 (52%)
Frame = +2
Query: 251 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 430
H +S + L+ + SGSWDKTL++W L+ K + H + +VA D+ +
Sbjct: 248 HYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDSKCLESIQAHDDAINTVAAGFDD-LLF 306
Query: 431 SGSRDKTIKLWNTLAECKYT 490
+GS D T+K+W + K T
Sbjct: 307 TGSADGTLKVWKRELQGKGT 326
Score = 44.0 bits (99), Expect = 1e-04
Identities = 51/202 (25%), Positives = 85/202 (42%), Gaps = 2/202 (0%)
Frame = +2
Query: 86 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFI 265
L GT+ +G V +A + D++ + S K + VWK +D + S +
Sbjct: 130 LIGTIVRQDGHVYSLAASG---DLLFTGSDSKNIRVWKDLKDHTGFK-------STSGLV 179
Query: 266 SDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS--VAFSVDNRQIVSGS 439
+V++ D N +G D +R+W + +T + L + SV+ + V
Sbjct: 180 KAIVITGD-NRIFTGHQDGKIRVWRGSKRRTGGYSRIGSLPTLKEFLTKSVNPKNYVEVR 238
Query: 440 RDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKL 619
R K + I+ H D VSC+ S N ++ S WD+T+KVW L++ K
Sbjct: 239 RRKNV----------LKIR---HYDAVSCL--SLNEELGLLYSGSWDKTLKVWRLSDSKC 283
Query: 620 KINHLGHSGYLNTVTVSPDGSL 685
+ H +NTV D L
Sbjct: 284 LESIQAHDDAINTVAAGFDDLL 305
Score = 43.2 bits (97), Expect = 2e-04
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 6/154 (3%)
Frame = +2
Query: 155 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 334
++ S S DKTL VW+L+ + + + H I+ V D + +GS D TL++
Sbjct: 263 LLYSGSWDKTLKVWRLSDSK-----CLESIQAHDDAINTVAAGFD-DLLFTGSADGTLKV 316
Query: 335 WDL-AAGKTTRRF-----EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQ 496
W GK T+ F V ++A ++ + GS D T+ W +
Sbjct: 317 WKRELQGKGTKHFLVNVLMKQENAVTALAVNITAAVVYCGSSDGTVNFWEGQKYLSHGGT 376
Query: 497 DDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 598
GH V C+ A +++S G D+ + VW
Sbjct: 377 LRGHRLAVLCLA----AAGSLVLSGGADKNICVW 406
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 49.2 bits (112), Expect = 3e-06
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 1/114 (0%)
Frame = +2
Query: 230 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 409
P L GH I D+ S LS S DKT+RLWD+ KT + H V + FS
Sbjct: 498 PVCSLKGHLDAILDLSWSKS-QLLLSSSMDKTVRLWDIET-KTCLKLFAHNDYVTCIQFS 555
Query: 410 -VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVS 568
VD +SGS D I++W+ + ++ ++ + V+ ++P+ +I S
Sbjct: 556 PVDENYFLSGSLDAKIRIWS--IQDRHVVEWSDLHEMVTAACYTPDGQGALIGS 607
Score = 46.4 bits (105), Expect = 2e-05
Identities = 49/212 (23%), Positives = 101/212 (47%), Gaps = 12/212 (5%)
Frame = +2
Query: 95 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 274
+L+GH + ++ + ++LSSS DKT+ +W + E + +L+ H+ +++ +
Sbjct: 501 SLKGHLDAILDLSWSKS--QLLLSSSMDKTVRLWDI---ETKTCL---KLFAHNDYVTCI 552
Query: 275 VLSS-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKT 451
S D NY LSGS D +R+W + + + D + V + ++ D + + GS
Sbjct: 553 QFSPVDENYFLSGSLDAKIRIWSI-QDRHVVEWSDLHEMVTAACYTPDGQGALIGSHKGI 611
Query: 452 IKLWNTLAECK--YTIQDDGHSD-------WVSCVRFSPNHANPIIVSCGWDRTVKVWHL 604
+ ++T +CK T Q D S+ ++ +FSP + + ++V+ D +++
Sbjct: 612 CRAYDT-EDCKLSQTNQIDVQSNKKSQAKRKITSFQFSPVNPSEVLVTSA-DSRIRILDG 669
Query: 605 TNCKLKINHLGHSGYLNTVTVSPDGS--LCAS 694
+ K ++ + + S DG +CAS
Sbjct: 670 SEVIHKFKGFRNTCSQLSASYSQDGKYIICAS 701
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 49.2 bits (112), Expect = 3e-06
Identities = 41/139 (29%), Positives = 57/139 (41%), Gaps = 7/139 (5%)
Frame = +2
Query: 71 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 250
S T+ RG GH V +A +P S D LI+W N +K
Sbjct: 279 SPTVGPRGVYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGTNPVTKVEKAHDA 338
Query: 251 HSHFISDVVLSSDGNYALSGSWDKTLRLWD---LAA---GKTTRRFEDHTKDVLSVAFSV 412
H + D N L+GS D T+RL+D L A G +FE H VL V +S
Sbjct: 339 DLHCVD--WNPHDDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSP 396
Query: 413 DNRQIV-SGSRDKTIKLWN 466
D + S + D + +W+
Sbjct: 397 DKSSVFGSSAEDGLLNIWD 415
Score = 41.1 bits (92), Expect = 7e-04
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 9/169 (5%)
Frame = +2
Query: 119 VTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS-SDGN 295
+T I T+ K I+ + + T ++E+ P+ +GH + DV S +
Sbjct: 253 ITTIGTDSKSSGSIIKQTGEGT------DKNESPTVGPRGVYHGHEDTVEDVAFSPTSAQ 306
Query: 296 YALSGSWDKTLRLWDLAAGKT--TRRFEDHTKDVLSVAFSV-DNRQIVSGSRDKTIKLWN 466
S D L LWD G T+ + H D+ V ++ D+ I++GS D T++L++
Sbjct: 307 EFCSVGDDSCLILWDARTGTNPVTKVEKAHDADLHCVDWNPHDDNLILTGSADNTVRLFD 366
Query: 467 TLAECKYTIQD-----DGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 598
+ +GH V CV++SP+ ++ + S D + +W
Sbjct: 367 RRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSS-VFGSSAEDGLLNIW 414
Score = 29.9 bits (64), Expect = 1.7
Identities = 47/209 (22%), Positives = 80/209 (38%), Gaps = 12/209 (5%)
Frame = +2
Query: 107 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGI-------PQKRLYGHSHFI 265
H G V +I P+ ++ + + +++W + N + + P L GH
Sbjct: 163 HPGEVNRIRELPQNSKIVATHTDSPDVLIWDVETQPNRHAVLGAANSRPDLILTGHQDNA 222
Query: 266 S-DVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 442
+ + + LSG DK++ LW + +DH + S + I+ +
Sbjct: 223 EFALAMCPTEPFVLSGGKDKSVVLWSI---------QDHITTI--GTDSKSSGSIIKQTG 271
Query: 443 DKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL---TNC 613
+ T K + + GH D V V FSP A S G D + +W TN
Sbjct: 272 EGTDKNESPTVGPRGVYH--GHEDTVEDVAFSPTSAQE-FCSVGDDSCLILWDARTGTNP 328
Query: 614 KLKINHLGHSGYLNTVTVSP-DGSLCASG 697
K+ H L+ V +P D +L +G
Sbjct: 329 VTKVEK-AHDADLHCVDWNPHDDNLILTG 356
>At1g15850.1 68414.m01902 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
mRNA-associated protein mrnp 41 (SP:P78406) [Homo
sapiens]; similar to mitotic checkpoint protein
GI:9294423 from [Arabidopsis thaliana]
Length = 140
Score = 49.2 bits (112), Expect = 3e-06
Identities = 27/113 (23%), Positives = 52/113 (46%)
Frame = +2
Query: 119 VTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNY 298
++ ++ +PK D+++++S D + W++TR + + K H + DG
Sbjct: 29 ISSLSFSPK-ADILVATSWDCQVRCWEITRSDGSIASEPKVSMSHDQPVLCSAWKDDGTT 87
Query: 299 ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 457
+G DK ++W L +G H +A+ +V+GS DKT+K
Sbjct: 88 VFTGGCDKQAKMWPLLSGAQPSTVAMHDAPFNQIAWIPGMNLLVTGSWDKTLK 140
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 48.8 bits (111), Expect = 3e-06
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
Frame = +2
Query: 152 DMILSSSRDKTLIVWKLTRDENNYGIP-QKRLYGHSHFISDVVLSSDGNYALSGSWDKTL 328
+++ S + L +WKL E N K L H + D+ S D Y +SGS D +
Sbjct: 18 ELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSC 77
Query: 329 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 484
+WD+ G + + H V VA+ + + S S D+T +++ + K
Sbjct: 78 IIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIYANKPQTK 129
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 48.8 bits (111), Expect = 3e-06
Identities = 28/89 (31%), Positives = 42/89 (47%)
Frame = +2
Query: 242 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 421
L GH+ + D+ S D + SGS D T+ +W++ G T H V V +
Sbjct: 114 LRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIGS 173
Query: 422 QIVSGSRDKTIKLWNTLAECKYTIQDDGH 508
I S S DKT+ +W T ++ + DGH
Sbjct: 174 FIASQSDDKTVIIWRT-SDWGMAHRTDGH 201
Score = 45.2 bits (102), Expect = 4e-05
Identities = 29/101 (28%), Positives = 44/101 (43%)
Frame = +2
Query: 338 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDW 517
D+ K HT DV+ + +S D+ + SGS D T+ +WN T+ GH
Sbjct: 104 DVENWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVL-RGHLSL 162
Query: 518 VSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGH 640
V V + P I S D+TV +W ++ + GH
Sbjct: 163 VKGVTWDP--IGSFIASQSDDKTVIIWRTSDWGMAHRTDGH 201
Score = 41.1 bits (92), Expect = 7e-04
Identities = 31/111 (27%), Positives = 45/111 (40%)
Frame = +2
Query: 74 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 253
E K TLRGH V + +P M+ S S D T+ +W + G+ L GH
Sbjct: 106 ENWKAVMTLRGHTADVVDLNWSPD-DSMLASGSLDNTVHIWNMRT-----GMCTTVLRGH 159
Query: 254 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 406
+ V G++ S S DKT+ +W + R + H L F
Sbjct: 160 LSLVKGVTWDPIGSFIASQSDDKTVIIWRTSDWGMAHRTDGHWAKSLGSTF 210
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 48.4 bits (110), Expect = 5e-06
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 10/159 (6%)
Frame = +2
Query: 248 GHSHFISDVVLSSDGNYALSGSWDKTLRLWD--LAAGKTT----RRFEDHTKDVLSVAFS 409
GH+ + + S G SG D + +WD +A+ +T R E+HT V ++A+
Sbjct: 264 GHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWC 323
Query: 410 VDNRQIVS---GSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWD 580
+++ G D+TIK WNT D G V + +S N ++ S G+
Sbjct: 324 PFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQ--VCSLLWSKNE-RELLSSHGFT 380
Query: 581 RT-VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCAS 694
+ + +W + GH+ + + SPDG AS
Sbjct: 381 QNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVAS 419
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Frame = +2
Query: 368 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQ----DDGHSDWVSCVR 532
+ HT++V + +S +Q+ SG D + +W+ ++A T Q + H+ V +
Sbjct: 262 YRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALA 321
Query: 533 FSPNHANPIIV-SCGWDRTVKVWH 601
+ P AN + G DRT+K W+
Sbjct: 322 WCPFQANLLATGGGGGDRTIKFWN 345
Score = 39.9 bits (89), Expect = 0.002
Identities = 50/222 (22%), Positives = 95/222 (42%), Gaps = 9/222 (4%)
Frame = +2
Query: 62 SKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ-- 235
SK + +L T+ ++ + P+ P +L S+ +L + Y IPQ
Sbjct: 70 SKEAYRKQLAETMNLNHTRILAFRNKPQAPVELLPSNHSASLHQQPKSVKPRRY-IPQTS 128
Query: 236 KRLYGHSHFISDVVLSS-DGNYA--LSGSWDKTLRLWDLAAGKTTR--RFEDHTKDVLSV 400
+R + D L+ D A L+ + D T+ LWD + G T+ ++ V S+
Sbjct: 129 ERTLDAPDIVDDFYLNLLDWGSANVLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSI 188
Query: 401 AFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWD 580
++ D R + G + ++LW++ + + GH V + ++ NH I+ + G D
Sbjct: 189 NWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAWN-NH---ILTTGGMD 244
Query: 581 RTVKVWHLTNCKLKI--NHLGHSGYLNTVTVSPDGSLCASGG 700
+ + + + I + GH+ + + S G ASGG
Sbjct: 245 GLI-INNDVRIRSPIVETYRGHTQEVCGLKWSGSGQQLASGG 285
Score = 31.9 bits (69), Expect = 0.42
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +2
Query: 308 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 466
G L LW + HT VL +A S D + S + D+T++ WN
Sbjct: 378 GFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWN 430
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 48.4 bits (110), Expect = 5e-06
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 10/159 (6%)
Frame = +2
Query: 248 GHSHFISDVVLSSDGNYALSGSWDKTLRLWD--LAAGKTT----RRFEDHTKDVLSVAFS 409
GH+ + + S G SG D + +WD +A+ +T R E+HT V ++A+
Sbjct: 254 GHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWC 313
Query: 410 VDNRQIVS---GSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWD 580
+++ G D+TIK WNT D G V + +S N ++ S G+
Sbjct: 314 PFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQ--VCSLLWSKNE-RELLSSHGFT 370
Query: 581 RT-VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCAS 694
+ + +W + GH+ + + SPDG AS
Sbjct: 371 QNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVAS 409
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Frame = +2
Query: 368 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQ----DDGHSDWVSCVR 532
+ HT++V + +S +Q+ SG D + +W+ ++A T Q + H+ V +
Sbjct: 252 YRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALA 311
Query: 533 FSPNHANPIIV-SCGWDRTVKVWH 601
+ P AN + G DRT+K W+
Sbjct: 312 WCPFQANLLATGGGGGDRTIKFWN 335
Score = 39.9 bits (89), Expect = 0.002
Identities = 50/222 (22%), Positives = 95/222 (42%), Gaps = 9/222 (4%)
Frame = +2
Query: 62 SKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ-- 235
SK + +L T+ ++ + P+ P +L S+ +L + Y IPQ
Sbjct: 60 SKEAYRKQLAETMNLNHTRILAFRNKPQAPVELLPSNHSASLHQQPKSVKPRRY-IPQTS 118
Query: 236 KRLYGHSHFISDVVLSS-DGNYA--LSGSWDKTLRLWDLAAGKTTR--RFEDHTKDVLSV 400
+R + D L+ D A L+ + D T+ LWD + G T+ ++ V S+
Sbjct: 119 ERTLDAPDIVDDFYLNLLDWGSANVLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSI 178
Query: 401 AFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWD 580
++ D R + G + ++LW++ + + GH V + ++ NH I+ + G D
Sbjct: 179 NWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAWN-NH---ILTTGGMD 234
Query: 581 RTVKVWHLTNCKLKI--NHLGHSGYLNTVTVSPDGSLCASGG 700
+ + + + I + GH+ + + S G ASGG
Sbjct: 235 GLI-INNDVRIRSPIVETYRGHTQEVCGLKWSGSGQQLASGG 275
Score = 31.9 bits (69), Expect = 0.42
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +2
Query: 308 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 466
G L LW + HT VL +A S D + S + D+T++ WN
Sbjct: 368 GFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWN 420
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 48.4 bits (110), Expect = 5e-06
Identities = 30/118 (25%), Positives = 62/118 (52%)
Frame = +2
Query: 110 NGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSD 289
NG V Q+ + D++ + ++D +++VW+ + + P L GH+ ++ V L
Sbjct: 220 NGPVGQVYSLVVGTDLLFAGTQDGSILVWRYNSTTSCFD-PAASLLGHT--LAVVSLYVG 276
Query: 290 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 463
N SG+ D ++++W L + + +HT V+S+ ++ ++S S D T+K+W
Sbjct: 277 ANRLYSGAMDNSIKVWSLDNLQCIQTLTEHTSVVMSLI--CWDQFLLSCSLDNTVKIW 332
Score = 35.1 bits (77), Expect = 0.045
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +2
Query: 239 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTT 361
+L GH ++ + L S + + S D+T+R+WD A+G+ T
Sbjct: 139 QLDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCT 179
Score = 31.5 bits (68), Expect = 0.56
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Frame = +2
Query: 377 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT-LAECKYTIQDDGHSDWVSCVRFSPNHAN 553
HT V+S+ V ++ SG+ D +IK+W+ +C T+ + H+ V S +
Sbjct: 266 HTLAVVSLY--VGANRLYSGAMDNSIKVWSLDNLQCIQTLTE--HTSVV----MSLICWD 317
Query: 554 PIIVSCGWDRTVKVWHLT---NCKLKINHLGHSGYL 652
++SC D TVK+W T N ++ H G L
Sbjct: 318 QFLLSCSLDNTVKIWAATEGGNLEVTYTHKEEYGVL 353
Score = 29.9 bits (64), Expect = 1.7
Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Frame = +2
Query: 365 RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA-ECKYTIQDDGHSDWVSCVRFSP 541
+ + H K V +A + ++ + S+D+T+++W+ + +C + G V C+
Sbjct: 139 QLDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCTGVLNLGGE---VGCI---- 191
Query: 542 NHANPIIVSCGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPD 676
P ++ G VK W++ N L +N G G + ++ V D
Sbjct: 192 ISEGPWLL-VGMPNLVKAWNIQNNADLSLN--GPVGQVYSLVVGTD 234
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 48.4 bits (110), Expect = 5e-06
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Frame = +2
Query: 302 LSGSWDKTLRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-- 466
+SG D +R+WD GK ++ ++ H + + S+ + D+ ++GS DKT KLW+
Sbjct: 191 VSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLWDMR 250
Query: 467 TLAECK-YTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKV------------WHLT 607
TL K YT V+ V SP N +++ G D + ++ T
Sbjct: 251 TLTLIKTYTTVVP-----VNAVAMSP-LLNHVVLGGGQDASAVTTTDHRAGKFEAKFYDT 304
Query: 608 NCKLKINHL-GHSGYLNTVTVSPDGSLCASGG 700
+ +I + GH G +N + SPDG +SGG
Sbjct: 305 ILQEEIGGVKGHFGPINALAFSPDGKSFSSGG 336
Score = 41.9 bits (94), Expect = 4e-04
Identities = 33/111 (29%), Positives = 55/111 (49%)
Frame = +2
Query: 98 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 277
++GH +T + N + D++ S ++D T VW +N + R GHS +
Sbjct: 33 MKGHERPLTFLRYN-RNGDLLFSCAKDHTPTVWFA---DNGERLGTYR--GHSGAVWCCD 86
Query: 278 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 430
+S D + ++GS D+T +LWD+ +GK F+ SV FSV + V
Sbjct: 87 ISRDSSRLITGSADQTAKLWDVKSGKELFTFK-FGAPARSVDFSVGDHLAV 136
Score = 37.9 bits (84), Expect = 0.006
Identities = 19/73 (26%), Positives = 37/73 (50%)
Frame = +2
Query: 248 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 427
GH ++ + + +G+ S + D T +W G+ + H+ V S D+ ++
Sbjct: 35 GHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDISRDSSRL 94
Query: 428 VSGSRDKTIKLWN 466
++GS D+T KLW+
Sbjct: 95 ITGSADQTAKLWD 107
Score = 35.1 bits (77), Expect = 0.045
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +2
Query: 248 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQ 424
GH I+ + ++D ++ L+GS DKT +LWD+ + + V +VA S + N
Sbjct: 218 GHKEAITSLCKAADDSHFLTGSHDKTAKLWDMRTLTLIKTYTT-VVPVNAVAMSPLLNHV 276
Query: 425 IVSGSRD 445
++ G +D
Sbjct: 277 VLGGGQD 283
Score = 32.7 bits (71), Expect = 0.24
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = +2
Query: 503 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 682
GH ++ +R++ N ++ SC D T VW N + + GHSG + +S D S
Sbjct: 35 GHERPLTFLRYNRN--GDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDISRDSS 92
Query: 683 LCASG 697
+G
Sbjct: 93 RLITG 97
Score = 31.1 bits (67), Expect = 0.74
Identities = 43/209 (20%), Positives = 91/209 (43%), Gaps = 15/209 (7%)
Frame = +2
Query: 92 GTLRGHNG--WVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN----NYGIPQKRLYGH 253
GT RGH+G W I+ + +++ S D+T +W + + +G P + +
Sbjct: 73 GTYRGHSGAVWCCDISRDSS---RLITGSADQTAKLWDVKSGKELFTFKFGAPARSV--- 126
Query: 254 SHFISD--VVLSSDGNYALSGSWDKTLRLWD-----LAAGKTTRRFEDHTKDVLSVAFSV 412
+ D V+++D ++ + S R+ + + + D K + +
Sbjct: 127 DFSVGDHLAVITTD-HFVGTSSAIHVKRIAEDPEDQVGDSVLVLQSPDGKKKINRAVWGP 185
Query: 413 DNRQIVSGSRDKTIKLWN--TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRT 586
N+ IVSG D I++W+ T K + ++ GH + ++ + + + ++ ++ D+T
Sbjct: 186 LNQTIVSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSH--FLTGSHDKT 243
Query: 587 VKVWHLTNCKLKINHLGHSGYLNTVTVSP 673
K+W + L I +N V +SP
Sbjct: 244 AKLWDMRTLTL-IKTYTTVVPVNAVAMSP 271
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 48.0 bits (109), Expect = 6e-06
Identities = 34/117 (29%), Positives = 53/117 (45%)
Frame = +2
Query: 113 GWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDG 292
G V Q+ M+ + + +++VWK T E++ L GH H G
Sbjct: 264 GVVGQVHAMTAANGMLFAGTSSGSILVWKATDSESDPFKYLTSLEGH-HSGEVTCFVVGG 322
Query: 293 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 463
SGS DKT+++WDL + + H V S+ ++ ++S S D TIKLW
Sbjct: 323 EVLYSGSVDKTIKVWDLNTLQCRMTLKQHIGTVTSLL--CWDKCLISSSLDGTIKLW 377
Score = 32.7 bits (71), Expect = 0.24
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Frame = +2
Query: 404 FSVDNRQIVSGSRDKTIKLW--NTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGW 577
F V + SGS DKTIK+W NTL +C+ T++ H V+ + + ++S
Sbjct: 318 FVVGGEVLYSGSVDKTIKVWDLNTL-QCRMTLKQ--HIGTVTSLLC----WDKCLISSSL 370
Query: 578 DRTVKVWHLT-NCKLKI 625
D T+K+W + N LK+
Sbjct: 371 DGTIKLWACSENESLKV 387
Score = 31.5 bits (68), Expect = 0.56
Identities = 46/201 (22%), Positives = 82/201 (40%), Gaps = 7/201 (3%)
Frame = +2
Query: 80 LKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSH 259
L + L GH + IA P+ D + S S D TL++W + I + G
Sbjct: 177 LAMVAALEGHKNDIKGIAL-PQGSDKLFSVSGDGTLLIWDCNSGQCVRSINLQAEAGS-- 233
Query: 260 FISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSV--AFSVDNRQIVS 433
L S+G + G ++ +++ K H + V+ A + N + +
Sbjct: 234 ------LISEGPWVFLGL-PNAVKAFNVQNSKDV-----HLEGVVGQVHAMTAANGMLFA 281
Query: 434 GSRDKTIKLWN-TLAEC---KYTIQDDGH-SDWVSCVRFSPNHANPIIVSCGWDRTVKVW 598
G+ +I +W T +E KY +GH S V+C ++ S D+T+KVW
Sbjct: 282 GTSSGSILVWKATDSESDPFKYLTSLEGHHSGEVTCFVVG----GEVLYSGSVDKTIKVW 337
Query: 599 HLTNCKLKINHLGHSGYLNTV 661
L + ++ H G + ++
Sbjct: 338 DLNTLQCRMTLKQHIGTVTSL 358
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 48.0 bits (109), Expect = 6e-06
Identities = 25/82 (30%), Positives = 41/82 (50%)
Frame = +2
Query: 245 YGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 424
+ H IS + LS D SGSWDKT ++W ++ + H +D ++ S +
Sbjct: 208 FRHLDAISCLALSEDKRLLYSGSWDKTFKVWRVSDLRCVESVNAH-EDAVNAVVSGFDGL 266
Query: 425 IVSGSRDKTIKLWNTLAECKYT 490
+ +GS D T+K+W + K T
Sbjct: 267 VFTGSADGTVKVWRREDQAKDT 288
Score = 37.5 bits (83), Expect = 0.009
Identities = 45/198 (22%), Positives = 81/198 (40%)
Frame = +2
Query: 86 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFI 265
L G+L G + +AT+ D++ + S K + VWK N+ + +S +
Sbjct: 90 LLGSLVREEGHIYSLATSG---DLLYTGSDSKNIRVWK------NH-VEFSSFKSNSGLV 139
Query: 266 SDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRD 445
+VL+ D + +G D +R+W A+ ++ T L IV S
Sbjct: 140 KAIVLAGDKIF--TGHQDGKIRVWKAASKESNVHRRVGTMPNL---LDYIRNSIVPSSYF 194
Query: 446 KTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKI 625
+ + A + H D +SC+ S + ++ S WD+T KVW +++ +
Sbjct: 195 NFTRRNRSSAALGFR-----HLDAISCLALSEDKR--LLYSGSWDKTFKVWRVSDLRCVE 247
Query: 626 NHLGHSGYLNTVTVSPDG 679
+ H +N V DG
Sbjct: 248 SVNAHEDAVNAVVSGFDG 265
Score = 31.9 bits (69), Expect = 0.42
Identities = 33/127 (25%), Positives = 52/127 (40%), Gaps = 12/127 (9%)
Frame = +2
Query: 119 VTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNY 298
VT IA + ++ S D T+ W+ + N G+ L GH ++ + L + GN
Sbjct: 303 VTAIAVDQS-ATLVYCGSSDGTVNFWERENNMKNGGV----LKGHK--LAVLCLVAAGNL 355
Query: 299 ALSGSWDKTLRLWDLAAG----KTTRRFEDHTKDVLSVAFSVDNRQ--------IVSGSR 442
SGS D +R+W G H V +A D + SGS
Sbjct: 356 MFSGSADLGIRVWRRPEGGGEHVCLSVLTGHAGPVKCLAVERDQESVSGERRWIVYSGSL 415
Query: 443 DKTIKLW 463
D+++K+W
Sbjct: 416 DRSVKMW 422
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 47.6 bits (108), Expect = 8e-06
Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 2/129 (1%)
Frame = +2
Query: 95 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 274
+L GH VT I + + ++ S+ D + VW + ++ + H+ + DV
Sbjct: 155 SLTGHTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDKK---KVRAFLHHNAPVKDV 211
Query: 275 VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF-EDHTKDVLSVAFSVDNRQI-VSGSRDK 448
S G LS +D T RL+D+ G T+ F ED V V F DN + +SG
Sbjct: 212 KWSKQGLSLLSCGYDCTSRLFDVERGVETQSFKEDEVVGV--VKFHPDNCNVFLSGGSKG 269
Query: 449 TIKLWNTLA 475
+++LW+ A
Sbjct: 270 SLRLWDIRA 278
Score = 41.5 bits (93), Expect = 5e-04
Identities = 52/218 (23%), Positives = 85/218 (38%), Gaps = 13/218 (5%)
Frame = +2
Query: 83 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 262
K+R L HN V + + K +LS D T ++ + R + + G F
Sbjct: 197 KVRAFLH-HNAPVKDVKWS-KQGLSLLSCGYDCTSRLFDVERGVETQSFKEDEVVGVVKF 254
Query: 263 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS- 439
D + N LSG +LRLWD+ A K + +L V F +Q +S S
Sbjct: 255 HPD-----NCNVFLSGGSKGSLRLWDIRANKFVHEYVRDLGPILDVEFIAGGKQFISSSD 309
Query: 440 ------RDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 601
+ + +W+ E + Q + C++ P +P+ ++ ++
Sbjct: 310 VSGRNISENAVIVWDISREVPLSNQVYVEAYTCPCIKRHPQ--DPVFIAQSHGNYTAIFS 367
Query: 602 LTNCKLKINHL----GH--SGYLNTVTVSPDGSLCASG 697
TN K+N GH +G+ SPDG ASG
Sbjct: 368 -TNPPFKLNKYKRFEGHWVAGFPIKCNFSPDGETLASG 404
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 47.6 bits (108), Expect = 8e-06
Identities = 52/209 (24%), Positives = 93/209 (44%), Gaps = 11/209 (5%)
Frame = +2
Query: 86 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRD---ENNYGIPQKRLYGHS 256
L+ ++ G + + +A + I S T+ +W D +N + K L G
Sbjct: 47 LKVSIYGEHAYPATVARYSPNGEWIASGDVSGTVRIWGAYNDHVLKNEF----KVLAGR- 101
Query: 257 HFISDVVLSSDGNYALS---GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR-Q 424
I D+ S+DG ++ G +R + +G F+ H++ VLS A +
Sbjct: 102 --IDDLQWSADGMRIVASGDGKGKSLVRAFMWDSGSNVGEFDGHSRRVLSCAIKPTRPFR 159
Query: 425 IVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 604
IV+ D + + K+ + HS++V+CVRF+P+ + I VS D+ ++
Sbjct: 160 IVTCGEDFLVNFYEG-PPFKFKLSSREHSNFVNCVRFAPDGSKFITVSS--DKKGIIYDG 216
Query: 605 TNCKLKINHL----GHSGYLNTVTVSPDG 679
C++ + L GH G + V+ SPDG
Sbjct: 217 KTCEI-LGELSSDDGHKGSIYAVSWSPDG 244
Score = 44.4 bits (100), Expect = 7e-05
Identities = 45/166 (27%), Positives = 70/166 (42%), Gaps = 5/166 (3%)
Frame = +2
Query: 200 LTRDENNYGIPQK-RLYGHSHFISDVV-LSSDGNYALSGSWDKTLRLWDLAAGKTTRR-F 370
+T D NN P K +YG + + V S +G + SG T+R+W + F
Sbjct: 39 VTLDLNN---PLKVSIYGEHAYPATVARYSPNGEWIASGDVSGTVRIWGAYNDHVLKNEF 95
Query: 371 EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA-ECKYTIQD-DGHSDWVSCVRFSPN 544
+ + + +S D +IV+ K L + + + DGHS V P
Sbjct: 96 KVLAGRIDDLQWSADGMRIVASGDGKGKSLVRAFMWDSGSNVGEFDGHSRRVLSCAIKPT 155
Query: 545 HANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 682
I V+CG D V + K K++ HS ++N V +PDGS
Sbjct: 156 RPFRI-VTCGEDFLVNFYEGPPFKFKLSSREHSNFVNCVRFAPDGS 200
Score = 39.5 bits (88), Expect = 0.002
Identities = 46/203 (22%), Positives = 85/203 (41%), Gaps = 11/203 (5%)
Frame = +2
Query: 92 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISD 271
G GH+ V A P P I++ D +V + + + HS+F++
Sbjct: 138 GEFDGHSRRVLSCAIKPTRPFRIVTCGED--FLVNFYEGPPFKFKLSSRE---HSNFVNC 192
Query: 272 VVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF------EDHTKDVLSVAFSVDNRQIVS 433
V + DG+ ++ S DK ++D GKT + H + +V++S D +Q+++
Sbjct: 193 VRFAPDGSKFITVSSDKKGIIYD---GKTCEILGELSSDDGHKGSIYAVSWSPDGKQVLT 249
Query: 434 GSRDKTIKLW----NTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 601
S DK+ K+W N T+ G S V + N IV+ T+ ++
Sbjct: 250 VSADKSAKIWDISDNGSGSLNTTLNCPGSSGGVDDMLVGCLWQNDHIVTVSLGGTISIFS 309
Query: 602 LTNC-KLKINHLGHSGYLNTVTV 667
++ K GH ++++ V
Sbjct: 310 ASDLDKSPFQFSGHMKNVSSLAV 332
Score = 37.9 bits (84), Expect = 0.006
Identities = 26/105 (24%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
Frame = +2
Query: 389 VLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC-KYTIQDDGHSDWVSCVRFSPNHANPIIV 565
V ++A + D + V G +D + L++ + + H +S +R+SP+ + +
Sbjct: 450 VTALAVTPDGTEAVIGGQDGKLHLYSINGDSLTEEAVLERHRGAISVIRYSPDLS--MFA 507
Query: 566 SCGWDRTVKVWHLTNCKLKI-NHLGHSGYLNTVTVSPDGSLCASG 697
S +R VW + ++K+ N L HS +N + SP+ ++ A+G
Sbjct: 508 SADLNREAVVWDRVSREMKLKNMLYHSARINCLAWSPNSTMVATG 552
Score = 29.5 bits (63), Expect = 2.3
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +2
Query: 248 GHSHFISDV-VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ 424
GH +S + VL + +Y LSGS+D + W L G + T++ F+ +
Sbjct: 322 GHMKNVSSLAVLKGNADYILSGSYDGLICKWMLGRGFCGKL--QRTQNSQIKCFAAHEEE 379
Query: 425 IVSGSRDKTI 454
IV+ D I
Sbjct: 380 IVTSGYDNKI 389
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 47.6 bits (108), Expect = 8e-06
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Frame = +2
Query: 293 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNT 469
NY S +D +++WD G+ ++ +H K SV FS D + VSGS D ++KLW +
Sbjct: 779 NYLASTDYDGVVQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLW-S 837
Query: 470 LAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCK 616
+ E K ++ V CV+FS +++N ++ D V + L K
Sbjct: 838 INE-KRSLGTIWSPANVCCVQFS-SYSNHLLAFGSADYKVYCYDLRYVK 884
Score = 37.9 bits (84), Expect = 0.006
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 2/112 (1%)
Frame = +2
Query: 137 NPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALS-GS 313
+P P +S S D ++ +W + ++ + G ++ ++ + V SS N+ L+ GS
Sbjct: 817 SPSDPTKFVSGSDDCSVKLWSIN-EKRSLGT----IWSPAN-VCCVQFSSYSNHLLAFGS 870
Query: 314 WDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 466
D + +DL KT H K V V F +D+ IVS S D ++KLWN
Sbjct: 871 ADYKVYCYDLRYVKTPWCTLAGHEKAVSYVKF-MDSETIVSASTDNSLKLWN 921
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +2
Query: 293 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI-VSGSRDKTIKL 460
N SGS DK +++WD+A GK E H K V +VA++ ++ +SGSRD+T+ L
Sbjct: 228 NIVASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTVVL 284
Score = 42.7 bits (96), Expect = 2e-04
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 8/108 (7%)
Frame = +2
Query: 290 GNYALSGSWDKTLRLWDLAAGKTTR------RFEDHTKDVLSVAFSVDNRQIV-SGSRDK 448
GN+ G+ + ++ +WDL R T + + F+ +NR IV SGS DK
Sbjct: 180 GNFVAIGTMESSIEIWDLDLVNEVLPCVQLGRIAGQT--LFFLTFNWENRNIVASGSEDK 237
Query: 449 TIKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTV 589
+K+W+ +CK T++ H V V ++ N+ +++S DRTV
Sbjct: 238 KVKVWDVATGKCKVTMEH--HEKKVHAVAWN-NYTPEVLLSGSRDRTV 282
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 47.2 bits (107), Expect = 1e-05
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 10/181 (5%)
Frame = +2
Query: 92 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISD 271
G + GH V+ +A NP Y I S+S D + +W ++ P GH +
Sbjct: 50 GAMDGHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFP-----GHQGAVRG 104
Query: 272 VVLSSDGNYALSGSWDKTLRLWDLA------AGKTTRRF-EDHTKDVLSVAFSVDNRQI- 427
+ S+DGN +S D T+RLW++ + ++ F E V AF + Q
Sbjct: 105 LTASTDGNVLVSCGTDCTVRLWNVPRPSLEDSSISSENFIEPSATYVWKNAFWAVDHQFE 164
Query: 428 --VSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 601
+ + + +WN G +D V VRF+P N + S DR++ ++
Sbjct: 165 GDLFATAGAQLDIWNHNRSQPVQSFQWG-TDSVISVRFNPGEPNLLATSAS-DRSITIYD 222
Query: 602 L 604
L
Sbjct: 223 L 223
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/67 (32%), Positives = 36/67 (53%)
Frame = +2
Query: 500 DGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDG 679
DGH D VSC+ +PN+ I S D +++W +++ + GH G + +T S DG
Sbjct: 53 DGHRDGVSCMAKNPNYLKGIF-SASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTASTDG 111
Query: 680 SLCASGG 700
++ S G
Sbjct: 112 NVLVSCG 118
Score = 41.9 bits (94), Expect = 4e-04
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = +2
Query: 251 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD---VLSVAFSVDNR 421
H + D+ S G ++GS+D+++R++ G + + HTK V V +S D
Sbjct: 278 HVSAVMDIDFSPTGREFVTGSYDRSVRIFPYNGGHSREIY--HTKRMQRVFCVKYSCDAT 335
Query: 422 QIVSGSRDKTIKLWNTLA 475
++SGS D ++LW A
Sbjct: 336 YVISGSDDTNLRLWKAKA 353
Score = 35.9 bits (79), Expect = 0.026
Identities = 21/76 (27%), Positives = 39/76 (51%)
Frame = +2
Query: 425 IVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 604
I S S D I+LW+ ++ + Q GH V + S + ++VSCG D TV++W++
Sbjct: 72 IFSASMDGDIRLWD-ISSRRTVCQFPGHQGAVRGLTASTD--GNVLVSCGTDCTVRLWNV 128
Query: 605 TNCKLKINHLGHSGYL 652
L+ + + ++
Sbjct: 129 PRPSLEDSSISSENFI 144
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +2
Query: 272 VVLSSDGNYALSGSWDKTLRLWDLAAGK 355
V S D Y +SGS D LRLW A +
Sbjct: 328 VKYSCDATYVISGSDDTNLRLWKAKASE 355
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Frame = +2
Query: 218 NYGIPQKRLYGHSHFISD--VVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 391
++ PQ + + S S + ++SDG G D +++L KT H V
Sbjct: 2612 DWQFPQAQAFASSGIRSSSVIAITSDGEIITGGHADNSIKLVSSDGAKTLETAFGHCAPV 2671
Query: 392 LSVAFSVDNRQIVSGSRDKTIKLW 463
+A S DN +V+GSRD T+ LW
Sbjct: 2672 TCLALSPDNNFLVTGSRDSTVLLW 2695
Score = 33.1 bits (72), Expect = 0.18
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 245 YGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR 364
+GH ++ + LS D N+ ++GS D T+ LW + T+R
Sbjct: 2665 FGHCAPVTCLALSPDNNFLVTGSRDSTVLLWRIHKAFTSR 2704
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2
Query: 71 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 202
S+ K T GH VT +A +P + +++ SRD T+++W++
Sbjct: 2655 SDGAKTLETAFGHCAPVTCLALSPDN-NFLVTGSRDSTVLLWRI 2697
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 47.2 bits (107), Expect = 1e-05
Identities = 32/92 (34%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Frame = +2
Query: 248 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD----VLSVAFSVD 415
GHS ++ VV S + L+GS D T R+WD GK + K V S+A
Sbjct: 199 GHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKCVKVIGSQDKKSRLRVSSMALDGS 258
Query: 416 NRQIVSGSRDKTIKLWNTLA-ECKYTIQDDGH 508
+V G + K + LWN A EC TI H
Sbjct: 259 ESWLVCG-QGKNLALWNLPASECVQTIPIPAH 289
Score = 37.5 bits (83), Expect = 0.009
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 3/99 (3%)
Frame = +2
Query: 317 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTI 493
D WD+ +GK F+ H+ + +V QI++GS D T ++W+ +C I
Sbjct: 180 DSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKCVKVI 239
Query: 494 QDDGHSDWVSCVRFSPN--HANPIIVSCGWDRTVKVWHL 604
G D S +R S + + CG + + +W+L
Sbjct: 240 ---GSQDKKSRLRVSSMALDGSESWLVCGQGKNLALWNL 275
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +2
Query: 560 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASG 697
+ + D W + + K+K+ GHS YL+TV S +G
Sbjct: 174 VFTAAGDSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTG 219
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 46.8 bits (106), Expect = 1e-05
Identities = 41/160 (25%), Positives = 68/160 (42%), Gaps = 11/160 (6%)
Frame = +2
Query: 248 GHSHFISDVVLSSDGNYALSGSWDKTLRLWD--LAAGKTTR----RFEDHTKDVLSVAFS 409
GH+ + + S GN SG D + +WD LA+ K TR RFE+HT V ++A+
Sbjct: 250 GHTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHTAAVRALAWC 309
Query: 410 VDNRQIVS---GSRDKTIKLWNT-LAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGW 577
+++ G D IK WNT C +++ C ++ S G+
Sbjct: 310 PFQASLLATGGGVGDGKIKFWNTHTGACLNSVETGSQ----VCSLLWSQSERELLSSHGF 365
Query: 578 DRT-VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCAS 694
+ + +W + GH+ + + SP+G AS
Sbjct: 366 TQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVAS 405
Score = 32.7 bits (71), Expect = 0.24
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +2
Query: 308 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 478
G L LW + HT VL +A S + + S + D+ ++LWN E
Sbjct: 364 GFTQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVFGE 420
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 46.8 bits (106), Expect = 1e-05
Identities = 37/140 (26%), Positives = 67/140 (47%), Gaps = 3/140 (2%)
Frame = +2
Query: 212 ENNYGIPQKRLYGHSHFISDVV-LS-SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 385
E + + K + + + DV+ LS S LS S DKT+RLWD+ + F H
Sbjct: 502 ETVFSLSDKPICSFTGHLDDVLDLSWSRSQLLLSSSMDKTVRLWDIETQSCLKLFA-HND 560
Query: 386 DVLSVAFS-VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPII 562
V V F+ +D +SGS D I++WN + ++ + + V+ V ++P+ +
Sbjct: 561 YVTCVQFNPLDEDYFISGSLDAKIRIWN--ISNRQVVEWNDLKEMVTAVCYTPDGQAAFV 618
Query: 563 VSCGWDRTVKVWHLTNCKLK 622
S + +++ +CKL+
Sbjct: 619 GSI--NGHCRLYSAEDCKLE 636
Score = 45.2 bits (102), Expect = 4e-05
Identities = 44/191 (23%), Positives = 90/191 (47%), Gaps = 11/191 (5%)
Frame = +2
Query: 155 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS-DGNYALSGSWDKTLR 331
++LSSS DKT+ +W + +L+ H+ +++ V + D +Y +SGS D +R
Sbjct: 532 LLLSSSMDKTVRLWDIETQS------CLKLFAHNDYVTCVQFNPLDEDYFISGSLDAKIR 585
Query: 332 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK--YTIQDD- 502
+W++ + + + D + V +V ++ D + GS + +L++ +CK T Q D
Sbjct: 586 IWNI-SNRQVVEWNDLKEMVTAVCYTPDGQAAFVGSINGHCRLYSA-EDCKLEQTNQIDL 643
Query: 503 -----GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTV 667
+ ++ +FSP + + ++V+ D ++V T K + T +
Sbjct: 644 QNKKKAQAKKITAFQFSPINPSEVLVTSA-DSRIRVLDGTELVQKFRGFKNMNSQMTASY 702
Query: 668 SPDGS--LCAS 694
+ D +CAS
Sbjct: 703 TVDAKHIVCAS 713
Score = 30.7 bits (66), Expect = 0.98
Identities = 22/80 (27%), Positives = 35/80 (43%)
Frame = +2
Query: 98 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 277
L HN +VT + NP D +S S D + +W ++ N + L ++ V
Sbjct: 555 LFAHNDYVTCVQFNPLDEDYFISGSLDAKIRIWNIS---NRQVVEWNDL---KEMVTAVC 608
Query: 278 LSSDGNYALSGSWDKTLRLW 337
+ DG A GS + RL+
Sbjct: 609 YTPDGQAAFVGSINGHCRLY 628
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 46.8 bits (106), Expect = 1e-05
Identities = 32/122 (26%), Positives = 57/122 (46%)
Frame = +2
Query: 125 QIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYAL 304
++ T P + M+ SS K + ++ R+ N+ + K H+ +S + L +
Sbjct: 200 RVGTLPTFKSMVKSSVNPKHFM--EVRRNRNS--VKTK----HNDAVSSLSLDVELGLLY 251
Query: 305 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 484
S SWD T+++W +A K H + SV D+ + +GS D T+K+W + K
Sbjct: 252 SSSWDTTIKVWRIADSKCLESIHAHDDAINSVMSGFDD-LVFTGSADGTVKVWKRELQGK 310
Query: 485 YT 490
T
Sbjct: 311 GT 312
Score = 31.1 bits (67), Expect = 0.74
Identities = 42/198 (21%), Positives = 80/198 (40%), Gaps = 2/198 (1%)
Frame = +2
Query: 74 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH 253
ET L G++ G + +A + D++ + S K + VWK ++ +
Sbjct: 113 ETNGLIGSIVRKEGHIYSLAASG---DLLYTGSDSKNIRVWKNLKEHAGFK-------SS 162
Query: 254 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS--VAFSVDNRQI 427
S I +V+ D + +G D +R+W ++ K + T V SV+ +
Sbjct: 163 SGLIKAIVIFGDRIF--TGHQDGKIRIWKVSKRKPGKHKRVGTLPTFKSMVKSSVNPKHF 220
Query: 428 VSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLT 607
+ R++ N++ H+D VS + ++ S WD T+KVW +
Sbjct: 221 MEVRRNR-----NSVKT--------KHNDAVSSLSLDVELG--LLYSSSWDTTIKVWRIA 265
Query: 608 NCKLKINHLGHSGYLNTV 661
+ K + H +N+V
Sbjct: 266 DSKCLESIHAHDDAINSV 283
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 46.8 bits (106), Expect = 1e-05
Identities = 53/193 (27%), Positives = 83/193 (43%), Gaps = 25/193 (12%)
Frame = +2
Query: 95 TLRGHNGWVTQIA-TNPKYPDMILSSSRDKTLIVWK------LTRD----ENNYGIPQKR 241
TL GH G V ++A +PKY ++ S S D +I+WK T+D ++ +
Sbjct: 51 TLTGHRGPVWEVAWAHPKYGSILASCSYDGQVILWKEGNQNQWTQDHVFTDHKSSVNSIA 110
Query: 242 LYGHSHFISDVVLSSDGNYAL-----SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 406
H +S SSDGN ++ G WD + G T+ + T V+
Sbjct: 111 WAPHDIGLSLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPATAPGALVSS 170
Query: 407 SVDNR--QIVSGSRDKTIKLWNTL-----AECKYTIQDDGHSDWVSCVRFSPNHANP--I 559
+ + ++ SG D T+K+W +C +Q H+DWV V ++PN P
Sbjct: 171 GLLDPVYKLASGGCDNTVKVWKLANGSWKMDCFPALQK--HTDWVRDVAWAPNLGLPKST 228
Query: 560 IVSCGWDRTVKVW 598
I S D V +W
Sbjct: 229 IASGSQDGKVIIW 241
Score = 38.3 bits (85), Expect = 0.005
Identities = 53/197 (26%), Positives = 83/197 (42%), Gaps = 22/197 (11%)
Frame = +2
Query: 104 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ-KRLYGHSHFISDVVL 280
GH V + + Y I ++S D T+ K+T NN G Q L GH + +V
Sbjct: 9 GHEDIVHDVQMD-YYGKRIATASSDCTI---KITGVSNNGGSQQLATLTGHRGPVWEVAW 64
Query: 281 SSD--GNYALSGSWDKTLRLWDLAAGKTTRR---FEDHTKDVLSVAFSVDN--RQIVSGS 439
+ G+ S S+D + LW + F DH V S+A++ + + GS
Sbjct: 65 AHPKYGSILASCSYDGQVILWKEGNQNQWTQDHVFTDHKSSVNSIAWAPHDIGLSLACGS 124
Query: 440 RDKTIKLWNTLAECKYTIQ--DDGHSDWVSCVRFSPNHA----------NPI--IVSCGW 577
D I ++ A+ + D H V+ V ++P A +P+ + S G
Sbjct: 125 SDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPATAPGALVSSGLLDPVYKLASGGC 184
Query: 578 DRTVKVWHLTNCKLKIN 628
D TVKVW L N K++
Sbjct: 185 DNTVKVWKLANGSWKMD 201
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/77 (31%), Positives = 41/77 (53%)
Frame = +2
Query: 236 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 415
K+L GHS ++D SS+ Y S S DKT+R+W+L+ G R + V+
Sbjct: 210 KQLTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRGVCIRVIYGISPQYCIRFHPVN 269
Query: 416 NRQIVSGSRDKTIKLWN 466
N + +G+ +K + ++N
Sbjct: 270 NNFLSAGNANKELTVFN 286
Score = 37.1 bits (82), Expect = 0.011
Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Frame = +2
Query: 98 LRGHNGWVTQI--ATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISD 271
L GH+ VT ++N +Y I SSS DKT+ VW+L+R G+ + +YG S
Sbjct: 212 LTGHSKDVTDFDFSSNNQY---IASSSLDKTIRVWELSR-----GVCIRVIYGISPQYCI 263
Query: 272 VVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR--FEDHTKDVLSVAFSVDNRQIVSGSRD 445
+ N+ +G+ +K L +++ + G+ ++ FED +V S+ + I G
Sbjct: 264 RFHPVNNNFLSAGNANKELTVFNFSTGRIIKKLLFED---EVTSMDHDHTGQIIFCGDGQ 320
Query: 446 KTIKLWNTLAECKYTIQDDGHSDWVS-CVRFSPNHANPI 559
T+ Y++ D H+ +S R NH +P+
Sbjct: 321 GTV----------YSVSMDSHTGSLSRSHRHRTNHKSPV 349
Score = 33.1 bits (72), Expect = 0.18
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = +2
Query: 434 GSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLT 607
G+ D ++ + + L E Q GHS V+ FS N N I S D+T++VW L+
Sbjct: 191 GASDGSLTVCSLLEEPSVLKQLTGHSKDVTDFDFSSN--NQYIASSSLDKTIRVWELS 246
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 46.0 bits (104), Expect = 2e-05
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = +2
Query: 248 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED-HTK-DVLSVAFSVDNR 421
G S I+ V SS G+ ++ S D +RL+D + K R + H K +V S F+ D R
Sbjct: 172 GVSGAINQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQR 231
Query: 422 QIVSGSRDKTIKLW 463
++S +D T+KLW
Sbjct: 232 FVLSSGKDSTVKLW 245
Score = 44.0 bits (99), Expect = 1e-04
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 6/126 (4%)
Frame = +2
Query: 239 RLYGHSHFISDV---VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVL-SVAF 406
R G++H S+V V + D + LS D T++LW++ +G+ + + + L S A
Sbjct: 210 RSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLWEIGSGRMVKEYLGAKRVKLRSQAI 269
Query: 407 SVDNRQIVSGSRDKT--IKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWD 580
D + V + + + W+ K H+ + SP + V+CG D
Sbjct: 270 FNDTEEFVISIDEASNEVVTWDARTADKVAKWPSNHNGAPRWIEHSP--VESVFVTCGID 327
Query: 581 RTVKVW 598
R+++ W
Sbjct: 328 RSIRFW 333
Score = 33.9 bits (74), Expect = 0.10
Identities = 34/167 (20%), Positives = 79/167 (47%), Gaps = 6/167 (3%)
Frame = +2
Query: 155 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 334
+++SS++D + + ++ +++ +H + + G + L+G+ L
Sbjct: 98 ILISSAKDNCIKFFDFSKTTAKRAF---KVFQDTHNVRSISFHPSGEFLLAGTDHPIPHL 154
Query: 335 WDLAAGKT--TRRFEDH--TKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL-AECKYTIQD 499
+D+ + F D + + V +S ++ S+D I+L++ + A+C +I +
Sbjct: 155 YDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGN 214
Query: 500 -DGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLG 637
G S+ S V F+ + ++S G D TVK+W + + ++ +LG
Sbjct: 215 AHGKSEVTSAV-FTKDQR--FVLSSGKDSTVKLWEIGSGRMVKEYLG 258
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 46.0 bits (104), Expect = 2e-05
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Frame = +2
Query: 248 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED-HTK-DVLSVAFSVDNR 421
G S I+ V SS G+ ++ S D +RL+D + K R + H K +V S F+ D R
Sbjct: 264 GVSGAINQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQR 323
Query: 422 QIVSGSRDKTIKLW 463
++S +D T+KLW
Sbjct: 324 FVLSSGKDSTVKLW 337
Score = 44.0 bits (99), Expect = 1e-04
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 6/126 (4%)
Frame = +2
Query: 239 RLYGHSHFISDV---VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVL-SVAF 406
R G++H S+V V + D + LS D T++LW++ +G+ + + + L S A
Sbjct: 302 RSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTVKLWEIGSGRMVKEYLGAKRVKLRSQAI 361
Query: 407 SVDNRQIVSGSRDKT--IKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWD 580
D + V + + + W+ K H+ + SP + V+CG D
Sbjct: 362 FNDTEEFVISIDEASNEVVTWDARTADKVAKWPSNHNGAPRWIEHSP--VESVFVTCGID 419
Query: 581 RTVKVW 598
R+++ W
Sbjct: 420 RSIRFW 425
Score = 33.9 bits (74), Expect = 0.10
Identities = 34/167 (20%), Positives = 79/167 (47%), Gaps = 6/167 (3%)
Frame = +2
Query: 155 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 334
+++SS++D + + ++ +++ +H + + G + L+G+ L
Sbjct: 190 ILISSAKDNCIKFFDFSKTTAKRAF---KVFQDTHNVRSISFHPSGEFLLAGTDHPIPHL 246
Query: 335 WDLAAGKT--TRRFEDH--TKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL-AECKYTIQD 499
+D+ + F D + + V +S ++ S+D I+L++ + A+C +I +
Sbjct: 247 YDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGN 306
Query: 500 -DGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLG 637
G S+ S V F+ + ++S G D TVK+W + + ++ +LG
Sbjct: 307 AHGKSEVTSAV-FTKDQR--FVLSSGKDSTVKLWEIGSGRMVKEYLG 350
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 45.6 bits (103), Expect = 3e-05
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Frame = +2
Query: 365 RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPN 544
+ H V +V F+ +VSGS D+ I LWN L+ + GH + V +F P
Sbjct: 50 KLNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIPF 109
Query: 545 HANPIIVSCGWDRTVKVWH-LTNCKLKINHLG-HSGYLNTVTVSP 673
+ I++ G D V++ L N K++ LG H G + + V P
Sbjct: 110 TDDRTIITSGADGQVRLGQILENGKVETKRLGRHHGRVYKLAVLP 154
Score = 43.6 bits (98), Expect = 1e-04
Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 4/122 (3%)
Frame = +2
Query: 239 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF-EDHTKDVLSVAF--S 409
+L GH ++ V +S G+ +SGS D+ + LW+ +G + H ++V F
Sbjct: 50 KLNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIPF 109
Query: 410 VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDG-HSDWVSCVRFSPNHANPIIVSCGWDRT 586
D+R I++ D ++L L K + G H V + P N + SCG D
Sbjct: 110 TDDRTIITSGADGQVRLGQILENGKVETKRLGRHHGRVYKLAVLPGDPN-VFYSCGEDGF 168
Query: 587 VK 592
V+
Sbjct: 169 VQ 170
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 45.2 bits (102), Expect = 4e-05
Identities = 37/152 (24%), Positives = 64/152 (42%), Gaps = 6/152 (3%)
Frame = +2
Query: 263 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR---FEDHTKDVLSVAFSVDNRQ--I 427
++ V+ S DG+ ++L+ G+ R+ + H V +AFS N+Q +
Sbjct: 420 VNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDIAFSTPNKQLCV 479
Query: 428 VSGSRDKTIKLWNTLAECK-YTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 604
+ DKTIK+W+ K YT + + C + N I S D +K W
Sbjct: 480 TTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQ--FIFSTALDGKIKAWLY 537
Query: 605 TNCKLKINHLGHSGYLNTVTVSPDGSLCASGG 700
N ++++ + T+ S DG+ S G
Sbjct: 538 DNMGSRVDYEAPGRWCTTMAYSADGTRLFSCG 569
Score = 36.3 bits (80), Expect = 0.020
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +2
Query: 287 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 466
D N G D T++++++ + + + H+K + +AFS +VS D + +WN
Sbjct: 877 DNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 936
Query: 467 T 469
T
Sbjct: 937 T 937
Score = 32.7 bits (71), Expect = 0.24
Identities = 25/112 (22%), Positives = 48/112 (42%), Gaps = 5/112 (4%)
Frame = +2
Query: 320 KTLRLWDLAAGKTTRRFEDHTKDVLSV---AFSVDNRQIVSGSRDKTIKLWNTLA--ECK 484
KT ++WDL+ + + V+SV +S D ++L++ + +
Sbjct: 394 KTFKVWDLSKCSMPLQAALVKEPVVSVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMR 453
Query: 485 YTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGH 640
++ D H V+ + FS + + +CG D+T+KVW + GH
Sbjct: 454 QHLEIDAHVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGH 505
Score = 27.9 bits (59), Expect = 6.9
Identities = 22/88 (25%), Positives = 39/88 (44%)
Frame = +2
Query: 77 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 256
T K T T +A +P+ ++I D T+ ++ + DE + +L GHS
Sbjct: 854 TFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDE-----VKSKLKGHS 908
Query: 257 HFISDVVLSSDGNYALSGSWDKTLRLWD 340
I+ + S+ N +S D L +W+
Sbjct: 909 KRITGLAFSNVLNVLVSSGADAQLCVWN 936
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 45.2 bits (102), Expect = 4e-05
Identities = 37/152 (24%), Positives = 64/152 (42%), Gaps = 6/152 (3%)
Frame = +2
Query: 263 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR---FEDHTKDVLSVAFSVDNRQ--I 427
++ V+ S DG+ ++L+ G+ R+ + H V +AFS N+Q +
Sbjct: 420 VNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDIAFSTPNKQLCV 479
Query: 428 VSGSRDKTIKLWNTLAECK-YTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 604
+ DKTIK+W+ K YT + + C + N I S D +K W
Sbjct: 480 TTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQ--FIFSTALDGKIKAWLY 537
Query: 605 TNCKLKINHLGHSGYLNTVTVSPDGSLCASGG 700
N ++++ + T+ S DG+ S G
Sbjct: 538 DNMGSRVDYEAPGRWCTTMAYSADGTRLFSCG 569
Score = 36.3 bits (80), Expect = 0.020
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +2
Query: 287 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 466
D N G D T++++++ + + + H+K + +AFS +VS D + +WN
Sbjct: 877 DNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 936
Query: 467 T 469
T
Sbjct: 937 T 937
Score = 32.7 bits (71), Expect = 0.24
Identities = 25/112 (22%), Positives = 48/112 (42%), Gaps = 5/112 (4%)
Frame = +2
Query: 320 KTLRLWDLAAGKTTRRFEDHTKDVLSV---AFSVDNRQIVSGSRDKTIKLWNTLA--ECK 484
KT ++WDL+ + + V+SV +S D ++L++ + +
Sbjct: 394 KTFKVWDLSKCSMPLQAALVKEPVVSVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMR 453
Query: 485 YTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGH 640
++ D H V+ + FS + + +CG D+T+KVW + GH
Sbjct: 454 QHLEIDAHVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGH 505
Score = 27.9 bits (59), Expect = 6.9
Identities = 22/88 (25%), Positives = 39/88 (44%)
Frame = +2
Query: 77 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 256
T K T T +A +P+ ++I D T+ ++ + DE + +L GHS
Sbjct: 854 TFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDE-----VKSKLKGHS 908
Query: 257 HFISDVVLSSDGNYALSGSWDKTLRLWD 340
I+ + S+ N +S D L +W+
Sbjct: 909 KRITGLAFSNVLNVLVSSGADAQLCVWN 936
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 44.8 bits (101), Expect = 6e-05
Identities = 34/146 (23%), Positives = 61/146 (41%), Gaps = 9/146 (6%)
Frame = +2
Query: 242 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR 421
LYGH+ + V L + + +D +R+WD+ G + + + ++A D +
Sbjct: 158 LYGHTEAVRTVFLLASAKLVFTSGYDSIVRMWDMEEGLSIAASKPLGCTIRALA--ADTK 215
Query: 422 QIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPI---------IVSCG 574
+V+G D I W +L + G + R H PI I S
Sbjct: 216 LLVAGGTDGFIHCWKSLDGLRNLFDLTGFQKEKTEFRLW-GHEGPITSLALDMTSIFSGS 274
Query: 575 WDRTVKVWHLTNCKLKINHLGHSGYL 652
WD +V++W ++ K + L HS ++
Sbjct: 275 WDMSVRIWDRSSMKC-VKTLRHSDWV 299
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 44.8 bits (101), Expect = 6e-05
Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 3/133 (2%)
Frame = +2
Query: 305 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF-SVDNRQIVSGSRDKTIKLWNTLAEC 481
S +++ +++WD+A + ++H K V S+ + S D + SGS D ++KLW+
Sbjct: 551 SSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGV 610
Query: 482 KY-TIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKI-NHLGHSGYLN 655
TI+ + + CV+F P+ + D V + L N KL + +GH ++
Sbjct: 611 SIGTIKTKAN---ICCVQF-PSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVS 666
Query: 656 TVTVSPDGSLCAS 694
V +L +S
Sbjct: 667 YVRFVDSSTLVSS 679
Score = 35.9 bits (79), Expect = 0.026
Identities = 33/124 (26%), Positives = 52/124 (41%), Gaps = 1/124 (0%)
Frame = +2
Query: 98 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 277
++ H V I + P ++ S S D ++ +W + N G+ + ++
Sbjct: 572 MKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSI-----NQGVSIGTIKTKANICCVQF 626
Query: 278 LSSDGNYALSGSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 454
S G GS D + +DL K H K V V F VD+ +VS S D T+
Sbjct: 627 PSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRF-VDSSTLVSSSTDNTL 685
Query: 455 KLWN 466
KLW+
Sbjct: 686 KLWD 689
Score = 29.9 bits (64), Expect = 1.7
Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 1/114 (0%)
Frame = +2
Query: 95 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYG-IPQKRLYGHSHFISD 271
T+ GH+ V+ + ++SSS D TL +W L+ + P GH++ +
Sbjct: 657 TMIGHHKTVSYVRFVDS--STLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNF 714
Query: 272 VVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 433
V LS Y +GS + ++ A ++ T D +S D Q +S
Sbjct: 715 VGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSELEVDDASQFIS 768
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 44.8 bits (101), Expect = 6e-05
Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 3/133 (2%)
Frame = +2
Query: 305 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF-SVDNRQIVSGSRDKTIKLWNTLAEC 481
S +++ +++WD+A + ++H K V S+ + S D + SGS D ++KLW+
Sbjct: 551 SSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGV 610
Query: 482 KY-TIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKI-NHLGHSGYLN 655
TI+ + + CV+F P+ + D V + L N KL + +GH ++
Sbjct: 611 SIGTIKTKAN---ICCVQF-PSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVS 666
Query: 656 TVTVSPDGSLCAS 694
V +L +S
Sbjct: 667 YVRFVDSSTLVSS 679
Score = 35.9 bits (79), Expect = 0.026
Identities = 33/124 (26%), Positives = 52/124 (41%), Gaps = 1/124 (0%)
Frame = +2
Query: 98 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 277
++ H V I + P ++ S S D ++ +W + N G+ + ++
Sbjct: 572 MKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSI-----NQGVSIGTIKTKANICCVQF 626
Query: 278 LSSDGNYALSGSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 454
S G GS D + +DL K H K V V F VD+ +VS S D T+
Sbjct: 627 PSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRF-VDSSTLVSSSTDNTL 685
Query: 455 KLWN 466
KLW+
Sbjct: 686 KLWD 689
Score = 29.9 bits (64), Expect = 1.7
Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 1/114 (0%)
Frame = +2
Query: 95 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYG-IPQKRLYGHSHFISD 271
T+ GH+ V+ + ++SSS D TL +W L+ + P GH++ +
Sbjct: 657 TMIGHHKTVSYVRFVDS--STLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNF 714
Query: 272 VVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS 433
V LS Y +GS + ++ A ++ T D +S D Q +S
Sbjct: 715 VGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSELEVDDASQFIS 768
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 44.4 bits (100), Expect = 7e-05
Identities = 42/189 (22%), Positives = 83/189 (43%), Gaps = 7/189 (3%)
Frame = +2
Query: 155 MILSSSRDKTLIVWKLTRDENNYG-IPQKRLYGHS---HFISDVVLSSDGN-YALSGSWD 319
++ S+ DK + +W+ ++ + G +P G +S + S G+ Y SG
Sbjct: 57 VVASTGEDKKISLWR--KNGQSLGTVPVTGKDGGDSAEECLSAISFSKKGSRYICSGGTG 114
Query: 320 KTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD 499
+ +++WDL ++ + HT + V ++ + + S S + + N + + T
Sbjct: 115 QIVKIWDLQRKLCIKKLKGHTSTITGVMYNCKDEHLASVSVGGDLIVHNLASGARATELK 174
Query: 500 DGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPD 676
D + + + +S + ++V+ G D TV +W T K++ L HS V SP
Sbjct: 175 DPNGQVLRLLDYS-RSSRHLLVTAGDDGTVHLWDTTGRSPKMSWLKQHSAPTAGVCFSPS 233
Query: 677 G-SLCASGG 700
+ AS G
Sbjct: 234 NEKIIASVG 242
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +2
Query: 296 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 475
Y+ WD +LRL L K R F+ H V+S++ +SGS D+T+ LW+
Sbjct: 92 YSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQRV 151
Query: 476 E-CKYTIQDDG 505
E C+ ++ G
Sbjct: 152 EKCQGLLRVQG 162
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +2
Query: 146 YPDMILSSSR---DKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSW 316
+P ++ SSR D +L + L+ +N Y + GH + + L S G +SGS
Sbjct: 86 HPTTVIYSSRNGWDDSLRL--LSLHDNKY---LRYFKGHHDRVVSLSLCSGGECFISGSL 140
Query: 317 DKTLRLWD 340
D+T+ LWD
Sbjct: 141 DRTVLLWD 148
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +2
Query: 296 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 475
Y+ WD +LRL L K R F+ H V+S++ +SGS D+T+ LW+
Sbjct: 89 YSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQRV 148
Query: 476 E-CKYTIQDDG 505
E C+ ++ G
Sbjct: 149 EKCQGLLRVQG 159
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Frame = +2
Query: 146 YPDMILSSSR---DKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSW 316
+P ++ SSR D +L + L+ +N Y + GH + + L S G +SGS
Sbjct: 83 HPTTVIYSSRNGWDDSLRL--LSLHDNKY---LRYFKGHHDRVVSLSLCSGGECFISGSL 137
Query: 317 DKTLRLWD 340
D+T+ LWD
Sbjct: 138 DRTVLLWD 145
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 44.0 bits (99), Expect = 1e-04
Identities = 32/147 (21%), Positives = 73/147 (49%), Gaps = 4/147 (2%)
Frame = +2
Query: 71 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 250
+++L + + H G V +A + ++ + S D+ L++W L + P + +
Sbjct: 214 NKSLDAQQIFKAHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASK--PVQSVVA 271
Query: 251 HSHFISDVVLSSDGNYAL-SGSWDKTLRLWDLAAGKTT-RRFEDHTKDVLSVAFSVDNRQ 424
HS ++ + + + + +GS DKT++L+DL T F+ H ++V V ++ N
Sbjct: 272 HSMEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKLSTALHTFDSHKEEVFQVGWNPKNET 331
Query: 425 IV-SGSRDKTIKLWN-TLAECKYTIQD 499
I+ S + + +W+ + + + T++D
Sbjct: 332 ILASCCLGRRLMVWDLSRIDEEQTVED 358
Score = 35.1 bits (77), Expect = 0.045
Identities = 45/182 (24%), Positives = 83/182 (45%), Gaps = 16/182 (8%)
Frame = +2
Query: 107 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGI-----PQKRLYGHSHFISD 271
H+G V + P+ P +I + + + + V+ ++ + + P +L GHS
Sbjct: 124 HDGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLRGHSSEGYG 183
Query: 272 VVLSS-DGNYALSGSWDKTLRLWDLAAGKTTRR------FEDHTKDVLSVAFSVDNRQIV 430
+ S + LSGS D + LWD+ A + F+ H V VA+ + + +
Sbjct: 184 LSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVEDVAWHLRHEYLF 243
Query: 431 -SGSRDKTIKLWNTLA-ECKYTIQD-DGHSDWVSCVRFSPNHANPIIVSCG-WDRTVKVW 598
S D+ + +W+ + +Q HS V+C+ F+P N +V+ G D+TVK++
Sbjct: 244 GSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNP--FNEWVVATGSTDKTVKLF 301
Query: 599 HL 604
L
Sbjct: 302 DL 303
Score = 33.9 bits (74), Expect = 0.10
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 10/94 (10%)
Frame = +2
Query: 95 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGI------PQKRLY--- 247
T H V Q+ NPK ++ S + L+VW L+R + + P + L+
Sbjct: 312 TFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTVEDAEDGPPELLFIHG 371
Query: 248 GHSHFISDVVLSSDGNYALSG-SWDKTLRLWDLA 346
GH+ ISD + ++ +S + D L++W +A
Sbjct: 372 GHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +2
Query: 317 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQ 496
D +RL+D+ K R F HT + + FS D + ++S S D ++++W+ + +
Sbjct: 536 DFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDVILAKQI--- 592
Query: 497 DDGHSDW-VSCVRFSPN 544
D H D ++ + SPN
Sbjct: 593 DGVHVDVPITALSLSPN 609
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 248 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 355
GH+ I+D+ S DG + +S S D +LR+WD+ K
Sbjct: 555 GHTDRITDLCFSEDGKWVISSSMDGSLRIWDVILAK 590
Score = 38.3 bits (85), Expect = 0.005
Identities = 29/158 (18%), Positives = 74/158 (46%)
Frame = +2
Query: 221 YGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSV 400
+ + +KR Y H + V S +S + L++WD + ++ D ++ +
Sbjct: 463 FDMSEKRRYAHDGEVIGVACDSTNTLMISAGYHGDLKVWDFKKRELKSQW-DVGCSLVKI 521
Query: 401 AFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWD 580
+ N + + + D I+L++ + K + GH+D ++ + FS + ++S D
Sbjct: 522 VYHRVNGLLATVADDFVIRLYDVVT-LKMVREFRGHTDRITDLCFSED--GKWVISSSMD 578
Query: 581 RTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCAS 694
++++W + K +I+ + + +++SP+ + A+
Sbjct: 579 GSLRIWDVILAK-QIDGVHVDVPITALSLSPNMDVLAT 615
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 44.0 bits (99), Expect = 1e-04
Identities = 50/193 (25%), Positives = 81/193 (41%), Gaps = 25/193 (12%)
Frame = +2
Query: 95 TLRGHNGWVTQIA-TNPKYPDMILSSSRDKTLIVWKLTRD----------ENNYGIPQKR 241
TL GH G V Q+A +PK+ ++ S S D +I+WK ++ +
Sbjct: 51 TLTGHRGPVWQVAWAHPKFGSLLASCSYDGQIILWKEGNQNQWTQAHVFTDHKVSVNSIA 110
Query: 242 LYGHSHFISDVVLSSDGNYAL-----SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 406
H +S +SDGN ++ G WD T G T+ + T+ V+
Sbjct: 111 WAPHELGLSLACGASDGNISVFSARADGGWDTTKIDQAHPVGVTSVSWAPATEPGALVSS 170
Query: 407 SVDNR--QIVSGSRDKTIKLW-----NTLAECKYTIQDDGHSDWVSCVRFSPNHANP--I 559
+ + ++ SG D T+K+W + +C + H+DWV V ++PN P
Sbjct: 171 GMIDPVYKLASGGCDSTVKVWKFSNGSWKMDCFPALNK--HTDWVRDVAWAPNLGLPKST 228
Query: 560 IVSCGWDRTVKVW 598
I S D V +W
Sbjct: 229 IASGSEDGKVIIW 241
Score = 30.3 bits (65), Expect = 1.3
Identities = 48/197 (24%), Positives = 84/197 (42%), Gaps = 22/197 (11%)
Frame = +2
Query: 104 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ-KRLYGHSHFISDVVL 280
GH+ + + + Y + ++S D T+ K+T N+ G L GH + V
Sbjct: 9 GHSDTIHDVVMD-YYGKRVATASSDCTI---KITGVSNSGGSQHLATLTGHRGPVWQVAW 64
Query: 281 SSD--GNYALSGSWDKTLRLWDLA-AGKTTRR--FEDHTKDVLSVAFSVDNR--QIVSGS 439
+ G+ S S+D + LW + T+ F DH V S+A++ + G+
Sbjct: 65 AHPKFGSLLASCSYDGQIILWKEGNQNQWTQAHVFTDHKVSVNSIAWAPHELGLSLACGA 124
Query: 440 RDKTIKLWNTLAECKY--TIQDDGHSDWVSCVRFSP----------NHANPI--IVSCGW 577
D I +++ A+ + T D H V+ V ++P +P+ + S G
Sbjct: 125 SDGNISVFSARADGGWDTTKIDQAHPVGVTSVSWAPATEPGALVSSGMIDPVYKLASGGC 184
Query: 578 DRTVKVWHLTNCKLKIN 628
D TVKVW +N K++
Sbjct: 185 DSTVKVWKFSNGSWKMD 201
Score = 28.3 bits (60), Expect = 5.2
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 7/122 (5%)
Frame = +2
Query: 230 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLA---AGKTTRRFEDHTKDVLSV 400
PQK GHS I DVV+ G + S D T+++ ++ + H V V
Sbjct: 3 PQKIETGHSDTIHDVVMDYYGKRVATASSDCTIKITGVSNSGGSQHLATLTGHRGPVWQV 62
Query: 401 AFSVD--NRQIVSGSRDKTIKLWNTLAECKYTIQD--DGHSDWVSCVRFSPNHANPIIVS 568
A++ + S S D I LW + ++T H V+ + ++P H + ++
Sbjct: 63 AWAHPKFGSLLASCSYDGQIILWKEGNQNQWTQAHVFTDHKVSVNSIAWAP-HELGLSLA 121
Query: 569 CG 574
CG
Sbjct: 122 CG 123
>At5g43930.1 68418.m05374 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo
sapiens]
Length = 726
Score = 43.6 bits (98), Expect = 1e-04
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Frame = +2
Query: 383 KDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHANPI 559
+ ++ AFS D R + S D T+K+ + C + + WV VRF P+H+ I
Sbjct: 107 RSTIAAAFSTDGRTLASTHGDHTVKIIDCETGNCLKVLTGHRRTPWV--VRFHPHHSE-I 163
Query: 560 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCA 691
+ S D V++W+ T + +HL + + ++ +G L A
Sbjct: 164 VASGSLDLEVRLWNTTTSECIRSHLFYRP-IASIAFHAEGELLA 206
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 43.6 bits (98), Expect = 1e-04
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Frame = +2
Query: 230 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK--DVLSVA 403
P L GH H + DV + +GS D LR+WD + H++ VL+VA
Sbjct: 9 PVAVLRGHRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHSRANGVLAVA 68
Query: 404 FS--VDNRQIVSGSRDKTIKLWN 466
S + +I+S RD T+K W+
Sbjct: 69 ASPWLGEDKIISQGRDGTVKCWD 91
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/101 (22%), Positives = 44/101 (43%)
Frame = +2
Query: 161 LSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWD 340
+S D ++++ L + I +K + +S + DG A + WD +R+++
Sbjct: 278 ISGGADDKIVMYNLNHSTGSCTI-RKEITLERPGVSGTSIRVDGKIAATAGWDHRIRVYN 336
Query: 341 LAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 463
G + H +V++S D + S S D T+ LW
Sbjct: 337 YRKGNALAILKYHRATCNAVSYSPDCELMASASEDATVALW 377
Score = 35.5 bits (78), Expect = 0.034
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +2
Query: 377 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE-CKYTIQDDGHSDWVSCVRFSPNHAN 553
H V+ V+F + +GS D +++W+T+ + ++ V V SP
Sbjct: 16 HRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHSRANGVLAVAASPWLGE 75
Query: 554 PIIVSCGWDRTVKVWHL 604
I+S G D TVK W +
Sbjct: 76 DKIISQGRDGTVKCWDI 92
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 43.6 bits (98), Expect = 1e-04
Identities = 33/112 (29%), Positives = 53/112 (47%)
Frame = +2
Query: 263 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 442
IS++ S++ ++ L SWDK +RL+D++ F H VL F D G+
Sbjct: 20 ISNLRFSNNSDHLLVSSWDKRVRLYDVSTNSLKGEFL-HGGAVLDCCFHDDFSGFSVGAD 78
Query: 443 DKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 598
K ++ + K I H V CV +S +A +++ WD+TVK W
Sbjct: 79 YKVRRIVFNVG--KEDILGT-HDKAVRCVEYS--YAAGQVITGSWDKTVKCW 125
Score = 31.5 bits (68), Expect = 0.56
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 377 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 466
H K V V +S Q+++GS DKT+K W+
Sbjct: 97 HDKAVRCVEYSYAAGQVITGSWDKTVKCWD 126
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 251 HSHFISDVVLSSDGNYALSGSWDKTLRLWD 340
H + V S ++GSWDKT++ WD
Sbjct: 97 HDKAVRCVEYSYAAGQVITGSWDKTVKCWD 126
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 43.2 bits (97), Expect = 2e-04
Identities = 52/209 (24%), Positives = 94/209 (44%), Gaps = 11/209 (5%)
Frame = +2
Query: 107 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSS 286
H V +A N ++ +++ S+S DK + VW + G + + H+ + V +
Sbjct: 232 HTRSVLGLAWNKEFRNILASASADKKVKVWDVAT-----GTCKITMEHHTKEVQAVAWNH 286
Query: 287 DG-NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ-IVSGSRDKTIKL 460
LSGS+D+T+ L D + DV S+A+ + V D T+K
Sbjct: 287 YAPEVLLSGSFDQTVVLKDGRQPSHSGFKWSVMSDVESLAWDPHSEHSFVVSLEDGTVKG 346
Query: 461 WN------TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLK 622
++ + +E + +GH + + V ++ + N ++ + DRTVK+W L+N +
Sbjct: 347 FDVRQASISASESNPSFTINGHDEAATSVSYNISAPN-LLATGSKDRTVKLWDLSNNEPS 405
Query: 623 --INHLGHSGYLNTVTVSPDGS-LCASGG 700
H ++G L + SPD L A GG
Sbjct: 406 CIATHNPNAGGLFFIAFSPDNPFLLAMGG 434
Score = 38.3 bits (85), Expect = 0.005
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Frame = +2
Query: 230 PQKRLYGHSHFISDVVLS-SDGNYALSGSWDKTLRLWDLAAGKTT--RRFEDHTKDVLSV 400
P + GH + V + S N +GS D+T++LWDL+ + + + + +
Sbjct: 361 PSFTINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNEPSCIATHNPNAGGLFFI 420
Query: 401 AFSVDNRQIVS-GSRDKTIKLWNTLAE 478
AFS DN +++ G +KLW+TL++
Sbjct: 421 AFSPDNPFLLAMGGVMGELKLWDTLSD 447
Score = 37.9 bits (84), Expect = 0.006
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +2
Query: 95 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 274
T+ GH+ T ++ N P+++ + S+D+T+ +W L+ +E + G FI+
Sbjct: 364 TINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNEPSCIATHNPNAGGLFFIA-- 421
Query: 275 VLSSDGNYALS-GSWDKTLRLWD 340
S D + L+ G L+LWD
Sbjct: 422 -FSPDNPFLLAMGGVMGELKLWD 443
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Frame = +2
Query: 203 TRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT 382
T EN + H + I D+ + L+ S D+T+++WD+ K T HT
Sbjct: 111 THQENTEKARFRDWIAHYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHT 170
Query: 383 KDVLSVAFSVDNRQ-IVSGSRDKTIKLWN 466
V S+ N +VSGSRD LW+
Sbjct: 171 GTVKSMCSHPTNSDLLVSGSRDGCFALWD 199
Score = 35.9 bits (79), Expect = 0.026
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +2
Query: 74 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 202
E K G L GH G V + ++P D+++S SRD +W L
Sbjct: 158 EENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWDL 200
Score = 35.9 bits (79), Expect = 0.026
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +2
Query: 260 FISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDN-RQIVS 433
F ++S DG Y LSGS D +W + + + H +V +V +S ++ +
Sbjct: 340 FFVRTMISPDGEYVLSGSSDGNAYIWQVNKPQVDPIILKGHDFEVTAVDWSPSEIGKVAT 399
Query: 434 GSRDKTIKLWN 466
S D T++LWN
Sbjct: 400 ASDDFTVRLWN 410
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +2
Query: 158 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS-SDGNYALSGSWDKTLRL 334
+L++S D+T+ VW + ++ G+ L GH+ + + ++ + +SGS D L
Sbjct: 143 LLTASGDQTIKVWDVEENKCT-GV----LIGHTGTVKSMCSHPTNSDLLVSGSRDGCFAL 197
Query: 335 WDLAAGKTTRRFE 373
WDL ++ + E
Sbjct: 198 WDLRCKSSSHKEE 210
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 560 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS-LCASG 697
+++ D+T+KVW + K +GH+G + ++ P S L SG
Sbjct: 143 LLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLLVSG 189
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/82 (25%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Frame = +2
Query: 233 QKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE-DHTKDVLSVAF- 406
++ L GH ++ + +S+G+ +SGS D + +W+ ++ K + HT ++ F
Sbjct: 43 EQELEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFV 102
Query: 407 -SVDNRQIVSGSRDKTIKLWNT 469
+ +VSG+ D ++L+NT
Sbjct: 103 PETSDELVVSGAGDAEVRLFNT 124
Score = 29.9 bits (64), Expect = 1.7
Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 5/88 (5%)
Frame = +2
Query: 227 IPQKRLY-GHSHFISDV----VLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 391
I KR Y GH + +D+ L G Y SGS D +W+ G+ + +
Sbjct: 607 IDMKRRYVGHCNVGTDIKQASFLGQRGEYIASGSDDGRWFIWEKQTGRLMKVLVGDESVL 666
Query: 392 LSVAFSVDNRQIVSGSRDKTIKLWNTLA 475
+ + + + D TIK+W+ A
Sbjct: 667 NCIQCHPFDSVVATSGIDNTIKIWSPTA 694
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 42.7 bits (96), Expect = 2e-04
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 2/126 (1%)
Frame = +2
Query: 239 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR-FEDHTKDVLSVAFSVD 415
RL GH I +V S DG+ +S S D++ R+W++ + + H+ V S
Sbjct: 230 RLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCCIS-- 287
Query: 416 NRQIVSGSRDKTIKLWNTLAECKYTIQDD-GHSDWVSCVRFSPNHANPIIVSCGWDRTVK 592
+ IV+ D T ++W I++ G W C+ + PN + ++V+ G+D +K
Sbjct: 288 DSLIVTAGEDCTCRVWGVDGTQLEVIKEHIGRGIW-RCL-YDPN--SSLLVTAGFDSAIK 343
Query: 593 VWHLTN 610
V L N
Sbjct: 344 VHQLHN 349
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 42.7 bits (96), Expect = 2e-04
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 2/126 (1%)
Frame = +2
Query: 239 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR-FEDHTKDVLSVAFSVD 415
RL GH I +V S DG+ +S S D++ R+W++ + + H+ V S
Sbjct: 230 RLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCCIS-- 287
Query: 416 NRQIVSGSRDKTIKLWNTLAECKYTIQDD-GHSDWVSCVRFSPNHANPIIVSCGWDRTVK 592
+ IV+ D T ++W I++ G W C+ + PN + ++V+ G+D +K
Sbjct: 288 DSLIVTAGEDCTCRVWGVDGTQLEVIKEHIGRGIW-RCL-YDPN--SSLLVTAGFDSAIK 343
Query: 593 VWHLTN 610
V L N
Sbjct: 344 VHQLHN 349
>At2g47790.1 68415.m05965 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; The first 3 exons are
identical to that of GB:AJ224957. This gene appears to
be a truncated version of that in GB:AJ224957; contains
4 WD-40 repeats (PF00400)
Length = 392
Score = 42.7 bits (96), Expect = 2e-04
Identities = 26/110 (23%), Positives = 52/110 (47%), Gaps = 5/110 (4%)
Frame = +2
Query: 248 GHSHFISDVVLSSDG----NYALSGSWDKTLRLWDLAAGKTTRRFED-HTKDVLSVAFSV 412
GHS ++ + SSD + S S D T+R WD + + R + + +++ S ++
Sbjct: 81 GHSDTVNQIAFSSDSAASPHVLHSCSSDGTIRSWDTRSFQQVSRIDTGNDQEIFSFSYGG 140
Query: 413 DNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPII 562
+++G + + LW+ + ++ H D V+ V F PN N ++
Sbjct: 141 AADNLLAGGCKEQVLLWDWRNSKQVACLEESHMDDVTQVHFVPNKPNKLL 190
>At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]
Length = 339
Score = 42.7 bits (96), Expect = 2e-04
Identities = 33/112 (29%), Positives = 55/112 (49%)
Frame = +2
Query: 263 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 442
IS++ S++ ++ L SWDK++RL+D A G R H VL F D+ S
Sbjct: 19 ISNLRFSNNSDHLLVSSWDKSVRLYD-ANGDLMRGEFKHGGAVLDCCFH-DDSSGFSVCA 76
Query: 443 DKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 598
D ++ + A + + H V CV +S +A +++ WD+T+K W
Sbjct: 77 DTKVRRIDFNAGKEDVL--GTHEKPVRCVEYS--YAAGQVITGSWDKTIKCW 124
Score = 36.7 bits (81), Expect = 0.015
Identities = 33/105 (31%), Positives = 48/105 (45%)
Frame = +2
Query: 152 DMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLR 331
D +L SS DK++ ++ D N G + + H + D D + S D +R
Sbjct: 29 DHLLVSSWDKSVRLY----DAN--GDLMRGEFKHGGAVLDCCFHDDSS-GFSVCADTKVR 81
Query: 332 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 466
D AGK H K V V +S Q+++GS DKTIK W+
Sbjct: 82 RIDFNAGKEDV-LGTHEKPVRCVEYSYAAGQVITGSWDKTIKCWD 125
Score = 31.1 bits (67), Expect = 0.74
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = +2
Query: 197 KLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR 367
K+ R + N G + L H + V S ++GSWDKT++ WD T R
Sbjct: 79 KVRRIDFNAG-KEDVLGTHEKPVRCVEYSYAAGQVITGSWDKTIKCWDPRGASGTER 134
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 42.7 bits (96), Expect = 2e-04
Identities = 35/152 (23%), Positives = 65/152 (42%), Gaps = 6/152 (3%)
Frame = +2
Query: 263 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR---FEDHTKDVLSVAFSVDNRQ--I 427
++ V+ S DG+ ++L+ G+ R+ + H V ++FS N+Q +
Sbjct: 420 VNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDISFSTPNKQLCV 479
Query: 428 VSGSRDKTIKLWNTLAECK-YTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 604
++ DKTIK+W+ K +T + + C + N I S D +K W
Sbjct: 480 ITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQ--FIFSTALDGKIKAWLY 537
Query: 605 TNCKLKINHLGHSGYLNTVTVSPDGSLCASGG 700
N ++++ + T+ S DG+ S G
Sbjct: 538 DNMGSRVDYDAPGRWCTTMAYSADGTRLFSCG 569
Score = 36.3 bits (80), Expect = 0.020
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +2
Query: 287 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 466
D N G D T++++++ + + + H+K + +AFS +VS D + +WN
Sbjct: 888 DNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 947
Query: 467 T 469
T
Sbjct: 948 T 948
Score = 33.5 bits (73), Expect = 0.14
Identities = 26/119 (21%), Positives = 52/119 (43%), Gaps = 5/119 (4%)
Frame = +2
Query: 320 KTLRLWDLAAGKTTRRFEDHTKDVLSV---AFSVDNRQIVSGSRDKTIKLWNTLA--ECK 484
KT ++WDL+ + + V+SV +S D ++L++ + +
Sbjct: 394 KTFKVWDLSKCSMPLQAALVKEPVVSVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMR 453
Query: 485 YTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTV 661
++ D H V+ + FS + +++CG D+T+KVW + GH + +V
Sbjct: 454 QHLEIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSV 512
Score = 27.9 bits (59), Expect = 6.9
Identities = 22/88 (25%), Positives = 39/88 (44%)
Frame = +2
Query: 77 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 256
T K T T +A +P+ ++I D T+ ++ + DE + +L GHS
Sbjct: 865 TFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDE-----VKSKLKGHS 919
Query: 257 HFISDVVLSSDGNYALSGSWDKTLRLWD 340
I+ + S+ N +S D L +W+
Sbjct: 920 KRITGLAFSNVLNVLVSSGADAQLCVWN 947
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 42.7 bits (96), Expect = 2e-04
Identities = 35/152 (23%), Positives = 65/152 (42%), Gaps = 6/152 (3%)
Frame = +2
Query: 263 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR---FEDHTKDVLSVAFSVDNRQ--I 427
++ V+ S DG+ ++L+ G+ R+ + H V ++FS N+Q +
Sbjct: 420 VNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDISFSTPNKQLCV 479
Query: 428 VSGSRDKTIKLWNTLAECK-YTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 604
++ DKTIK+W+ K +T + + C + N I S D +K W
Sbjct: 480 ITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQ--FIFSTALDGKIKAWLY 537
Query: 605 TNCKLKINHLGHSGYLNTVTVSPDGSLCASGG 700
N ++++ + T+ S DG+ S G
Sbjct: 538 DNMGSRVDYDAPGRWCTTMAYSADGTRLFSCG 569
Score = 36.3 bits (80), Expect = 0.020
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +2
Query: 287 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 466
D N G D T++++++ + + + H+K + +AFS +VS D + +WN
Sbjct: 888 DNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 947
Query: 467 T 469
T
Sbjct: 948 T 948
Score = 33.5 bits (73), Expect = 0.14
Identities = 26/119 (21%), Positives = 52/119 (43%), Gaps = 5/119 (4%)
Frame = +2
Query: 320 KTLRLWDLAAGKTTRRFEDHTKDVLSV---AFSVDNRQIVSGSRDKTIKLWNTLA--ECK 484
KT ++WDL+ + + V+SV +S D ++L++ + +
Sbjct: 394 KTFKVWDLSKCSMPLQAALVKEPVVSVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMR 453
Query: 485 YTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTV 661
++ D H V+ + FS + +++CG D+T+KVW + GH + +V
Sbjct: 454 QHLEIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSV 512
Score = 27.9 bits (59), Expect = 6.9
Identities = 22/88 (25%), Positives = 39/88 (44%)
Frame = +2
Query: 77 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS 256
T K T T +A +P+ ++I D T+ ++ + DE + +L GHS
Sbjct: 865 TFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDE-----VKSKLKGHS 919
Query: 257 HFISDVVLSSDGNYALSGSWDKTLRLWD 340
I+ + S+ N +S D L +W+
Sbjct: 920 KRITGLAFSNVLNVLVSSGADAQLCVWN 947
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/71 (30%), Positives = 36/71 (50%)
Frame = +2
Query: 251 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 430
HS +S + L+ D S SWD+T+++W + K + H V SV + +
Sbjct: 134 HSDAVSCLSLAEDQGLLYSASWDRTVKVWRIHDLKCIESIKAHDDAVNSV--TTAESLVF 191
Query: 431 SGSRDKTIKLW 463
+GS D T+K+W
Sbjct: 192 TGSADGTVKVW 202
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +2
Query: 506 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVS 670
HSD VSC+ + + ++ S WDRTVKVW + + K + H +N+VT +
Sbjct: 134 HSDAVSCLSLAEDQG--LLYSASWDRTVKVWRIHDLKCIESIKAHDDAVNSVTTA 186
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 41.5 bits (93), Expect = 5e-04
Identities = 39/161 (24%), Positives = 66/161 (40%), Gaps = 12/161 (7%)
Frame = +2
Query: 248 GHSHFISDVVLSSDGNYALSGSWDKTLRLWD---LAAGKTTR----RFEDHTKDVLSVAF 406
GH+ + + S G SG D + +WD +A+ TR RFE+HT V ++A+
Sbjct: 216 GHTEEVCGLKWSESGKKLASGGNDNVVHIWDHRSVASSNPTRQWLHRFEEHTAAVRALAW 275
Query: 407 SVDNRQIVS---GSRDKTIKLWNT-LAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCG 574
+++ G D IK WNT C +++ C ++ S G
Sbjct: 276 CPFQASLLATGGGVGDGKIKFWNTHTGACLNSVETGSQ----VCSLLWSKSERELLSSHG 331
Query: 575 WDRT-VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCAS 694
+ + + +W + GH+ + + SPDG AS
Sbjct: 332 FTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVAS 372
Score = 36.3 bits (80), Expect = 0.020
Identities = 30/129 (23%), Positives = 58/129 (44%), Gaps = 3/129 (2%)
Frame = +2
Query: 323 TLRLWDLAAGKTTR--RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQ 496
T+ LWD ++G T + ++ V S+ ++ D + G + ++LW+ ++ +
Sbjct: 113 TVYLWDASSGSTYKLVTIDEEEGPVTSINWTQDGLDLAIGLDNSEVQLWDCVSNRQVRTL 172
Query: 497 DDGHSDWVSCVRFSPNHANPIIVSCGWD-RTVKVWHLTNCKLKINHLGHSGYLNTVTVSP 673
GH V + ++ NH I+ + G D + V + +LGH+ + + S
Sbjct: 173 RGGHESRVGSLAWN-NH---ILTTGGMDGKIVNNDVRIRSSIVETYLGHTEEVCGLKWSE 228
Query: 674 DGSLCASGG 700
G ASGG
Sbjct: 229 SGKKLASGG 237
Score = 35.9 bits (79), Expect = 0.026
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +2
Query: 308 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 478
G L LW + HT VL +A S D + S + D+T++LWN E
Sbjct: 331 GFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGE 387
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +2
Query: 227 IPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL--AAGKTTRR 367
+ L GH+ + + S DG S + D+TLRLW++ KTT++
Sbjct: 346 VKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGEPPKTTKK 394
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 41.1 bits (92), Expect = 7e-04
Identities = 38/159 (23%), Positives = 64/159 (40%), Gaps = 10/159 (6%)
Frame = +2
Query: 248 GHSHFISDVVLSSDGNYALSGSWDKTLRLWD--LAAGKTTR----RFEDHTKDVLSVAFS 409
GH+ + + S G SG D + +WD LA+ TR RFE+HT V ++A+
Sbjct: 234 GHTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWC 293
Query: 410 VDNRQIVS---GSRDKTIKLWNT-LAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGW 577
+++ G D I WNT C +++ V + +S + +
Sbjct: 294 PFQASLLATGGGVGDGKINFWNTHTGACLNSVETGSQ---VCSLLWSKSERELLSAHGFT 350
Query: 578 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCAS 694
+ +W + GH+ + + SPDG AS
Sbjct: 351 QNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVAS 389
Score = 35.9 bits (79), Expect = 0.026
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +2
Query: 308 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 478
G L LW + HT VL +A S D + S + D+T++LWN E
Sbjct: 348 GFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGE 404
Score = 31.5 bits (68), Expect = 0.56
Identities = 29/130 (22%), Positives = 59/130 (45%), Gaps = 4/130 (3%)
Frame = +2
Query: 323 TLRLWDLAAGKTTR--RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQ 496
T+ LWD ++ T++ +D V S+ ++ D + G + +++W+ ++
Sbjct: 131 TVYLWDASSCYTSKLVTIDDENGPVTSINWTQDGLDLAVGLDNSEVQVWDCVSNRHVRTL 190
Query: 497 DDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKI--NHLGHSGYLNTVTVS 670
GH V + ++ NH I+ + G D + V + + I ++GH+ + + S
Sbjct: 191 RGGHESRVGSLAWN-NH---ILTTGGMDGKI-VNNDVRIRSSIIGTYVGHTEEVCGLKWS 245
Query: 671 PDGSLCASGG 700
G ASGG
Sbjct: 246 ESGKKLASGG 255
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +2
Query: 227 IPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL--AAGKTTRR 367
+ L GH+ + + S DG S + D+TLRLW++ KTT++
Sbjct: 363 VKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGEPPKTTKK 411
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 41.1 bits (92), Expect = 7e-04
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +2
Query: 236 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED-HTKDVLSVAFS- 409
K+L H ++ V ++DG+ LSGS D+ + LWD F+ H ++ F
Sbjct: 49 KKLDKHKGCVNTVSFNADGDILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFMP 108
Query: 410 -VDNRQIVSGSRDKTIK 457
D+R IV+ + DK ++
Sbjct: 109 FSDDRTIVTSAADKQVR 125
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Frame = +2
Query: 362 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 541
++ + H V +V+F+ D ++SGS D+ + LW+ D GH + + +F P
Sbjct: 49 KKLDKHKGCVNTVSFNADGDILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFMP 108
Query: 542 NHANPIIVSCGWDRTVKVWH-LTNCKLKINHLG-HSGYLNTVTVSP 673
+ IV+ D+ V+ L + +++ + LG H G ++ + V P
Sbjct: 109 FSDDRTIVTSAADKQVRYSKILESGQVETSLLGKHQGPVHKLAVEP 154
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5
WD-40 repeats (PF0400); similar to WD-40 repeat protein
MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 41.1 bits (92), Expect = 7e-04
Identities = 34/133 (25%), Positives = 51/133 (38%), Gaps = 7/133 (5%)
Frame = +2
Query: 89 RGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFIS 268
RG GH V +A P S D L++W + +K H +
Sbjct: 274 RGIYNGHKDTVEDVAFCPSSAQEFCSVGDDSCLMLWDARTGTSPAMKVEKAHDADLHCVD 333
Query: 269 DVVLSSDGNYALSGSWDKTLRLWDL------AAGKTTRRFEDHTKDVLSVAFSVDNRQIV 430
D N L+GS D T+R++D G +FE H VL V +S D +
Sbjct: 334 --WNPHDNNLILTGSADNTVRVFDRRNLTSNGVGSPVYKFEGHRAAVLCVQWSPDKSSVF 391
Query: 431 -SGSRDKTIKLWN 466
S + D + +W+
Sbjct: 392 GSSAEDGLLNIWD 404
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Frame = +2
Query: 107 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNY---GIPQKR----LYGHSHFI 265
H G V +I P+ ++ + + +++W + Y G P R L GH
Sbjct: 152 HPGEVNRIRELPQNSKIVATHTDSPDILIWNTETQPDRYAVLGAPDSRPDLLLIGHQDDA 211
Query: 266 S-DVVLSSDGNYALSGSWDKTLRLWDL 343
+ + + LSG DK++ LW++
Sbjct: 212 EFALAMCPTEPFVLSGGKDKSVILWNI 238
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +2
Query: 293 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTI 454
N S S DK +++WD+A G E HTK+V +VA++ ++SGS D+T+
Sbjct: 279 NILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTV 333
Score = 37.9 bits (84), Expect = 0.006
Identities = 20/68 (29%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Frame = +2
Query: 284 SDGNYALSGSWDKTLRLWDLAAGKTT--RRFEDHTKDVLSVAFSVDNRQIVS-GSRDKTI 454
S N +GS DK+++LWDL+ + + + + V S++F+VDN +++ G +
Sbjct: 415 STPNLLATGSMDKSVKLWDLSNNEPSCIATHQPNAGAVFSISFAVDNPFLLAIGGSKGEL 474
Query: 455 KLWNTLAE 478
+W+TL +
Sbjct: 475 HVWDTLLD 482
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 40.7 bits (91), Expect = 0.001
Identities = 40/197 (20%), Positives = 92/197 (46%), Gaps = 8/197 (4%)
Frame = +2
Query: 47 LFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN--N 220
L KP S+ S L+G+ G ++ I+ N K ++ S+S + T ++W L + + N
Sbjct: 152 LLKP-SEPSHFPLLKGSGSATQGEISFISWNRKVQQILASTSYNGTTVIWDLRKQKPIIN 210
Query: 221 YGIPQKR----LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLA-AGKTTRRFEDHTK 385
+ +R L + + + ++++SD + + TL+LWD+ R F H +
Sbjct: 211 FADSVRRRCSVLQWNPNVTTQIMVASDDDSS------PTLKLWDMRNIMSPVREFTGHQR 264
Query: 386 DVLSVAF-SVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPII 562
V+++ + D+ +++ ++D W+T + + ++W V + P +I
Sbjct: 265 GVIAMEWCPSDSSYLLTCAKDNRTICWDT-NTAEIVAELPAGNNWNFDVHWYPKIPG-VI 322
Query: 563 VSCGWDRTVKVWHLTNC 613
+ +D + ++++ C
Sbjct: 323 SASSFDGKIGIYNIEGC 339
Score = 36.3 bits (80), Expect = 0.020
Identities = 43/186 (23%), Positives = 73/186 (39%), Gaps = 8/186 (4%)
Frame = +2
Query: 86 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS--H 259
L G L H G V + N +++ S + D + +W L + P + G +
Sbjct: 114 LVGHLSVHKGPVRGLEFNAISSNLLASGADDGEICIWDLLKPSEPSHFPLLKGSGSATQG 173
Query: 260 FISDVVLSSDGNYAL-SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN--RQIV 430
IS + + L S S++ T +WDL K F D + SV N QI+
Sbjct: 174 EISFISWNRKVQQILASTSYNGTTVIWDLRKQKPIINFADSVRRRCSVLQWNPNVTTQIM 233
Query: 431 SGSRD---KTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 601
S D T+KLW+ + GH V + + P+ ++ +++C D W
Sbjct: 234 VASDDDSSPTLKLWDMRNIMSPVREFTGHQRGVIAMEWCPSDSS-YLLTCAKDNRTICWD 292
Query: 602 LTNCKL 619
++
Sbjct: 293 TNTAEI 298
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 40.7 bits (91), Expect = 0.001
Identities = 40/197 (20%), Positives = 92/197 (46%), Gaps = 8/197 (4%)
Frame = +2
Query: 47 LFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN--N 220
L KP S+ S L+G+ G ++ I+ N K ++ S+S + T ++W L + + N
Sbjct: 152 LLKP-SEPSHFPLLKGSGSATQGEISFISWNRKVQQILASTSYNGTTVIWDLRKQKPIIN 210
Query: 221 YGIPQKR----LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLA-AGKTTRRFEDHTK 385
+ +R L + + + ++++SD + + TL+LWD+ R F H +
Sbjct: 211 FADSVRRRCSVLQWNPNVTTQIMVASDDDSS------PTLKLWDMRNIMSPVREFTGHQR 264
Query: 386 DVLSVAF-SVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPII 562
V+++ + D+ +++ ++D W+T + + ++W V + P +I
Sbjct: 265 GVIAMEWCPSDSSYLLTCAKDNRTICWDT-NTAEIVAELPAGNNWNFDVHWYPKIPG-VI 322
Query: 563 VSCGWDRTVKVWHLTNC 613
+ +D + ++++ C
Sbjct: 323 SASSFDGKIGIYNIEGC 339
Score = 36.3 bits (80), Expect = 0.020
Identities = 43/186 (23%), Positives = 73/186 (39%), Gaps = 8/186 (4%)
Frame = +2
Query: 86 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHS--H 259
L G L H G V + N +++ S + D + +W L + P + G +
Sbjct: 114 LVGHLSVHKGPVRGLEFNAISSNLLASGADDGEICIWDLLKPSEPSHFPLLKGSGSATQG 173
Query: 260 FISDVVLSSDGNYAL-SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN--RQIV 430
IS + + L S S++ T +WDL K F D + SV N QI+
Sbjct: 174 EISFISWNRKVQQILASTSYNGTTVIWDLRKQKPIINFADSVRRRCSVLQWNPNVTTQIM 233
Query: 431 SGSRD---KTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 601
S D T+KLW+ + GH V + + P+ ++ +++C D W
Sbjct: 234 VASDDDSSPTLKLWDMRNIMSPVREFTGHQRGVIAMEWCPSDSS-YLLTCAKDNRTICWD 292
Query: 602 LTNCKL 619
++
Sbjct: 293 TNTAEI 298
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 40.7 bits (91), Expect = 0.001
Identities = 38/173 (21%), Positives = 77/173 (44%), Gaps = 3/173 (1%)
Frame = +2
Query: 188 IVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR 367
+VW++ +N YG + GH + + S AL S+D + L + G
Sbjct: 251 MVWRIPLTDNGYGAAEHVDIGHQPLDISIAVDSPEATALV-SFDSGVVLLN---GLNILS 306
Query: 368 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE--CKYTIQDDGHSDWVSCVRFSP 541
D V + S D ++ + G +D + +++ + K + H ++ +R+SP
Sbjct: 307 KIDLGFAVAASVISPDGKEAIVGGQDGKLHIYSVSGDNNLKEEAVLEKHRGALTVIRYSP 366
Query: 542 NHANPIIVSCGWDRTVKVWHLTNCKLKINH-LGHSGYLNTVTVSPDGSLCASG 697
+ + S +R VW ++K+N+ L H+ +N++ SP+ + A+G
Sbjct: 367 DLT--MFASGDANREAVVWDRETKQVKLNNMLFHTARINSLAWSPNNKMVATG 417
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +2
Query: 251 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF--ED-HTKDVLSVAFSVDNR 421
HS+F++ + S DG ++ S DK ++D G ED H + +V++S D++
Sbjct: 50 HSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPDSK 109
Query: 422 QIVSGSRDKTIKLW 463
++++ S DK+ K+W
Sbjct: 110 RVLTVSADKSAKVW 123
Score = 36.7 bits (81), Expect = 0.015
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = +2
Query: 500 DGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDG 679
DGHS V F P I +CG D V + K +H HS ++N + SPDG
Sbjct: 5 DGHSRRVLSCAFKPTRPFRI-ATCGEDFLVNFYDGPPFKFHSSHREHSNFVNCIRYSPDG 63
Query: 680 S 682
+
Sbjct: 64 T 64
Score = 34.7 bits (76), Expect = 0.060
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Frame = +2
Query: 368 FEDHTKDVLSVAFSVDNR-QIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPN 544
F+ H++ VLS AF +I + D + ++ K+ HS++V+C+R+SP+
Sbjct: 4 FDGHSRRVLSCAFKPTRPFRIATCGEDFLVNFYDG-PPFKFHSSHREHSNFVNCIRYSPD 62
Query: 545 HANPIIVSCGWDRTVKVWH-LTNCKL--KINHLGHSGYLNTVTVSPD 676
I VS D+ ++ T K+ + GH G + V+ SPD
Sbjct: 63 GTKFITVSS--DKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPD 107
Score = 32.7 bits (71), Expect = 0.24
Identities = 42/179 (23%), Positives = 70/179 (39%), Gaps = 7/179 (3%)
Frame = +2
Query: 83 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 262
K + R H+ +V I +P I SS K +I T D+ + GH
Sbjct: 42 KFHSSHREHSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASED---GHKGS 98
Query: 263 ISDVVLSSDGNYALSGSWDKTLRLWDLAAG-------KTTRRFEDHTKDVLSVAFSVDNR 421
I V S D L+ S DK+ ++W++A KT E + + V N
Sbjct: 99 IYAVSWSPDSKRVLTVSADKSAKVWEVAEDGTIGSVIKTLSFMESGGAEDMLVGCLWQND 158
Query: 422 QIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 598
+++ S T+ L++ K + GH V+ + + I+ SC +D + W
Sbjct: 159 HLITVSLGGTMSLFSADDMDKPPLLLSGHIKNVTSLAVLGENQKTIL-SCSYDGLIVKW 216
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 40.7 bits (91), Expect = 0.001
Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 4/124 (3%)
Frame = +2
Query: 239 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR-RFED---HTKDVLSVAF 406
R H ++ + ++DG Y LS D +RLWD+ +G+ T FE T + +
Sbjct: 307 RATAHYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGRNTLVNFETGRIQTNKGIQLDT 366
Query: 407 SVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRT 586
S D+ +V KT+K + + + T+ GH + V+ F+ N + + G DR
Sbjct: 367 S-DDPALVFVPCMKTVKAFG-MWSGRTTLMLRGHYESVNTCCFNSNDQE--LYTSGSDRQ 422
Query: 587 VKVW 598
+ VW
Sbjct: 423 ILVW 426
Score = 31.9 bits (69), Expect = 0.42
Identities = 27/122 (22%), Positives = 55/122 (45%), Gaps = 2/122 (1%)
Frame = +2
Query: 107 HNGWVTQI-ATNPKYPDMILSSSRDKTLIVWKLTRDENNY-GIPQKRLYGHSHFISDVVL 280
H G VT + ATN +LS+ D + +W + N R+ + D
Sbjct: 311 HYGAVTGLKATNDGM--YLLSAGSDSRIRLWDIESGRNTLVNFETGRIQTNKGIQLD--- 365
Query: 281 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 460
+SD + KT++ + + +G+TT H + V + F+ +++++ + D+ I +
Sbjct: 366 TSDDPALVFVPCMKTVKAFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTSGSDRQILV 425
Query: 461 WN 466
W+
Sbjct: 426 WS 427
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 40.3 bits (90), Expect = 0.001
Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 10/167 (5%)
Frame = +2
Query: 230 PQKRLYGHSHFISDVVLSS-DGNYALSGSWDKTLRLWDLAAGKTTR------RFEDHTKD 388
P RL GH + SS Y LSGS D+ + LWD++A T + +E H
Sbjct: 161 PDLRLMGHEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSI 220
Query: 389 VLSVAFSVDNRQIV-SGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIV 565
+ VA+ + N I S D + +W+ L + Q H ++ + F+P + ++
Sbjct: 221 IEDVAWHMKNENIFGSAGDDCQLVIWD-LRTNQMQHQVKVHEREINYLSFNPFN-EWVLA 278
Query: 566 SCGWDRTVKVWHLTNCKLKINHLG-HSGYLNTVTVSPD-GSLCASGG 700
+ D TV ++ L ++ L H G + V P+ ++ AS G
Sbjct: 279 TASSDSTVALFDLRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSG 325
Score = 39.1 bits (87), Expect = 0.003
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 12/109 (11%)
Frame = +2
Query: 98 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR--DE------NNYGIPQKRLY-- 247
L H G V Q+ +P + ++ SS D+ L+VW + R DE + P + L+
Sbjct: 301 LSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAEDGPPELLFSH 360
Query: 248 -GHSHFISDVVLSSDGNYALSG-SWDKTLRLWDLAAGKTTRRFEDHTKD 388
GH ISD + D + +S + D +L++W +A ED D
Sbjct: 361 GGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQMAESIYREDDEDEDDD 409
Score = 29.9 bits (64), Expect = 1.7
Identities = 25/124 (20%), Positives = 55/124 (44%), Gaps = 3/124 (2%)
Frame = +2
Query: 104 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 283
GH + +A + K ++ S+ D L++W L ++ Q ++ H I+ + +
Sbjct: 216 GHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRTNQ-----MQHQVKVHEREINYLSFN 270
Query: 284 SDGNYAL-SGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS-RDKTI 454
+ L + S D T+ L+DL H +V V + ++ +++ S D+ +
Sbjct: 271 PFNEWVLATASSDSTVALFDLRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRL 330
Query: 455 KLWN 466
+W+
Sbjct: 331 MVWD 334
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/110 (25%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Frame = +2
Query: 152 DMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG-----HSHFISDVVLSSDGNYALSGSW 316
D++++SS D +L ++ + + I + +G +H S ++ SS N +G
Sbjct: 37 DLLVTSSEDDSLRLFDIA-NAKQLKITYHKKHGTDRVCFTHHPSSLICSSRYNLESTGES 95
Query: 317 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 466
+ L ++D + R F+ H V+S+ S N +SGS D++++LW+
Sbjct: 96 LRYLSMYD---NRILRYFKGHKDRVVSLCMSPINDSFMSGSLDRSVRLWD 142
Score = 37.9 bits (84), Expect = 0.006
Identities = 24/103 (23%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Frame = +2
Query: 248 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF--EDHTKDVLSVAFSVDNR 421
G + ++D+ S+DG L + + + + D G+ F E + F+ D +
Sbjct: 198 GDTAEVNDIKFSNDGKSMLLTTTNNNIYVLDAYRGEKKCGFSLEPSQGTPIEATFTPDGK 257
Query: 422 QIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHA 550
++SGS D T+ WN + + + + VSC++++P A
Sbjct: 258 YVLSGSGDGTLHAWN-IENPSEVARWENNIGVVSCLKWAPRRA 299
Score = 32.3 bits (70), Expect = 0.32
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = +2
Query: 269 DVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 439
+ + DG Y LSGS D TL W++ R+E++ V + ++ V+ S
Sbjct: 249 EATFTPDGKYVLSGSGDGTLHAWNIENPSEVARWENNIGVVSCLKWAPRRAMFVAAS 305
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +2
Query: 146 YPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY-GHSHFISDVVLSSDGNYALSGSWDK 322
+P ++ SSR + R + Y R + GH + + +S + +SGS D+
Sbjct: 77 HPSSLICSSRYNLESTGESLRYLSMYDNRILRYFKGHKDRVVSLCMSPINDSFMSGSLDR 136
Query: 323 TLRLWDL 343
++RLWDL
Sbjct: 137 SVRLWDL 143
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = +2
Query: 209 DENNYGIPQKRLYGHSHFISDVVLS-SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 385
D N++G+ + Y I L GN ++G D +RL+D GK + H
Sbjct: 214 DANHFGLVKS--YDMPCNIESASLEPKSGNKFVAGGEDMWVRLFDFHTGKEIGCNKGHHG 271
Query: 386 DVLSVAFSVDNRQIVSGSRDKTIKLWNT 469
V V F+ SGS D TI++W T
Sbjct: 272 PVHCVRFAPTGESYASGSEDGTIRIWQT 299
Score = 36.7 bits (81), Expect = 0.015
Identities = 32/124 (25%), Positives = 51/124 (41%)
Frame = +2
Query: 326 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDG 505
+RLWD+ +GK + E + V S S D R I + T+K W+ A ++
Sbjct: 170 VRLWDVRSGKIVQTLETKS-PVTSAEVSQDGRYITTAD-GSTVKFWD--ANHFGLVKSYD 225
Query: 506 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSL 685
+ P N + G D V+++ K + GH G ++ V +P G
Sbjct: 226 MPCNIESASLEPKSGNKFVAG-GEDMWVRLFDFHTGKEIGCNKGHHGPVHCVRFAPTGES 284
Query: 686 CASG 697
ASG
Sbjct: 285 YASG 288
Score = 35.1 bits (77), Expect = 0.045
Identities = 35/144 (24%), Positives = 59/144 (40%), Gaps = 4/144 (2%)
Frame = +2
Query: 245 YGHSHFISDVVLSS---DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 415
+GHS + D+ S DG + +S S D L + G FE H V S +
Sbjct: 13 HGHSRPVVDLFYSPITPDGFFLISASKDSQPMLRNGETGDWIGTFEGHKGAVWSSCLDNN 72
Query: 416 NRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKV 595
+ S S D + KLW+ L + H V FS + +++ G+++ ++V
Sbjct: 73 ALRAASASADFSAKLWDALT--GDVLHSFEHKHIVRACAFSQD--TKYLITGGFEKILRV 128
Query: 596 WHLTNCKLKINHLGHS-GYLNTVT 664
+ L + S G + T+T
Sbjct: 129 FDLNRLDAPPTEIDKSPGSIRTLT 152
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 39.9 bits (89), Expect = 0.002
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Frame = +2
Query: 287 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLW 463
D + +SG D ++ WD+A H V S V++ +V+GS D T+K+W
Sbjct: 147 DKLHLVSGGDDGVVKYWDVAGATVISDLLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVW 206
Query: 464 NTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 604
+ I + H V V + P + +I + G +VKVW L
Sbjct: 207 DARVHTSNWIAEINHGLPVEDVVYLP--SGGLIATAG-GNSVKVWDL 250
Score = 37.9 bits (84), Expect = 0.006
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Frame = +2
Query: 98 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 277
L GH +V +P M+++ S D T+ VW +N+ I + H + DVV
Sbjct: 174 LLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVWDARVHTSNW-IAE---INHGLPVEDVV 229
Query: 278 -LSSDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSV 400
L S G A +G ++++WDL GK E H K V S+
Sbjct: 230 YLPSGGLIATAGG--NSVKVWDLIGGGKMVCSMESHNKTVTSL 270
Score = 27.5 bits (58), Expect = 9.1
Identities = 32/136 (23%), Positives = 60/136 (44%), Gaps = 2/136 (1%)
Frame = +2
Query: 296 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS-VAFSVDNRQIVSGSRDKTIKLWNTL 472
++L+ + T+ L+ + ++RRF +DV+S V F D + +++++ +
Sbjct: 66 HSLAVAHSATVSLFSSQSLSSSRRFS--FRDVVSSVCFRSDGALFAACDLSGVVQVFD-I 122
Query: 473 AECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYL 652
E HS V++ P +VS G D VK W + + + LGH Y+
Sbjct: 123 KERMALRTLRSHSAPARFVKY-PVQDKLHLVSGGDDGVVKYWDVAGATVISDLLGHKDYV 181
Query: 653 NTVTVSP-DGSLCASG 697
SP + S+ +G
Sbjct: 182 RCGDCSPVNDSMLVTG 197
>At1g69400.2 68414.m07968 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 272
Score = 39.9 bits (89), Expect = 0.002
Identities = 34/136 (25%), Positives = 57/136 (41%)
Frame = +2
Query: 263 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 442
+S + S N L SWD LRL+D+ + + +L F ++ SGS
Sbjct: 16 VSRLRFSPQSNNLLVASWDSYLRLYDVESSSLSLELNSQAA-LLDCCFENESTSFTSGS- 73
Query: 443 DKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLK 622
D I+ ++ A TI H D + + +S + ++S G+D +K W +
Sbjct: 74 DGFIRRYDLNAGTVDTI--GRHDDISTSIVYS--YEKGEVISTGFDEKIKFWDTRQRESL 129
Query: 623 INHLGHSGYLNTVTVS 670
+ G + VTVS
Sbjct: 130 VFSTDAGGAVGCVTVS 145
>At1g69400.1 68414.m07969 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 314
Score = 39.9 bits (89), Expect = 0.002
Identities = 34/136 (25%), Positives = 57/136 (41%)
Frame = +2
Query: 263 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 442
+S + S N L SWD LRL+D+ + + +L F ++ SGS
Sbjct: 16 VSRLRFSPQSNNLLVASWDSYLRLYDVESSSLSLELNSQAA-LLDCCFENESTSFTSGS- 73
Query: 443 DKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLK 622
D I+ ++ A TI H D + + +S + ++S G+D +K W +
Sbjct: 74 DGFIRRYDLNAGTVDTI--GRHDDISTSIVYS--YEKGEVISTGFDEKIKFWDTRQRESL 129
Query: 623 INHLGHSGYLNTVTVS 670
+ G + VTVS
Sbjct: 130 VFSTDAGGAVGCVTVS 145
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 39.9 bits (89), Expect = 0.002
Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 4/143 (2%)
Frame = +2
Query: 245 YGHSHFISDVVLSS---DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 415
+GHS + DV S DG + +S S D L + G FE H V S + +
Sbjct: 8 HGHSRPVVDVAYSPVTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCSLDKN 67
Query: 416 NRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKV 595
+ S S D T K+WN L + + H V FS + +++ G ++ +++
Sbjct: 68 AIRAASASADFTAKIWNALTGDE--LHSFEHKHIVRACAFSEDTHR--LLTGGMEKILRI 123
Query: 596 WHLTNCKLKINHLGHS-GYLNTV 661
+ L +G+S G + TV
Sbjct: 124 FDLNRPDAPPKEVGNSPGSIRTV 146
Score = 30.7 bits (66), Expect = 0.98
Identities = 15/58 (25%), Positives = 26/58 (44%)
Frame = +2
Query: 290 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 463
GN ++G D + +D G+ + H V V ++ SGS D T+++W
Sbjct: 235 GNTFIAGGEDMWVHRFDFQTGEEIGCNKGHHGPVHCVRYAPGGESYTSGSEDGTVRIW 292
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 39.1 bits (87), Expect = 0.003
Identities = 31/136 (22%), Positives = 58/136 (42%), Gaps = 12/136 (8%)
Frame = +2
Query: 239 RLYGHSHFISDVVLSSDGNYALSGSWDKT-----LRLWDLAAGKTTRRFEDHTKDVLSVA 403
+LYGH + + + GN S ++ + LW++ K R + H+ V +
Sbjct: 595 KLYGHGNELFSLCSDHKGNLVASSCKAQSASMAEIWLWEVGTWKAVGRLQSHSLTVTHLE 654
Query: 404 FSVDNRQIVSGSRDKTIKLW------NTLAECKYTIQDDGHSDWVSCVRFSP-NHANPII 562
FS D+ ++S SRD+ ++ N K + + H + ++P H
Sbjct: 655 FSYDDTLLLSVSRDRHFSVFSIQRTDNGEVSHKLMAKVEAHKRIIWACSWNPFGHQ---F 711
Query: 563 VSCGWDRTVKVWHLTN 610
+ D+TVK+W + N
Sbjct: 712 ATSSRDKTVKIWSVEN 727
Score = 34.7 bits (76), Expect = 0.060
Identities = 43/181 (23%), Positives = 76/181 (41%), Gaps = 32/181 (17%)
Frame = +2
Query: 158 ILSSSRDKTLIVWKLTRDENNYG------IPQKRLYGHSHFISDVVLSSDGNYALSGSWD 319
+LS D +I+W+L+ N+ +P G + + +V +D +A S S D
Sbjct: 85 LLSGDSDGIIILWELSTLNNDQQWRHVLQLPLSHKKGVTCITAYMVSETDAMFA-SASSD 143
Query: 320 KTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS-----------------GSRDK 448
+ +WD++ + K V + VD + IV+ G D
Sbjct: 144 GVVNVWDVSFPSQP---SEECKVVCLDSICVDTKAIVTLSLAELPQNPGRFALALGGLDN 200
Query: 449 TIKLWNTLAECKYT--IQDDGHSDWVSCVRFS-PNHANP------IIVSCGWDRTVKVWH 601
IKL++ K+T + GH+DW+ + FS P H ++VS D+ +++W
Sbjct: 201 KIKLYSGERTGKFTSVCELKGHTDWIRSLDFSLPLHTTEEIPNSIMLVSSSQDKVIRIWK 260
Query: 602 L 604
L
Sbjct: 261 L 261
Score = 30.7 bits (66), Expect = 0.98
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 13/100 (13%)
Frame = +2
Query: 203 TRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED-- 376
+++ N+ + QK GH ++DV + G Y LS S D+T R++ ED
Sbjct: 399 SKESENWQM-QKVPSGHFAAVTDVTWARTGEYLLSVSQDQTTRVFSAWKNDEGNEAEDEH 457
Query: 377 ---------HTKDVLSVAF--SVDNRQIVSGSRDKTIKLW 463
H D+ VA N + VSG+ +K ++++
Sbjct: 458 WHELARPQVHGHDINCVAMVQGKGNHRFVSGAEEKVVRVF 497
Score = 30.3 bits (65), Expect = 1.3
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Frame = +2
Query: 62 SKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIV---WKL-----TRDEN 217
SK SE +++ GH VT + T + + +LS S+D+T V WK DE+
Sbjct: 399 SKESENWQMQKVPSGHFAAVTDV-TWARTGEYLLSVSQDQTTRVFSAWKNDEGNEAEDEH 457
Query: 218 NYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWD 340
+ + + +++GH +V + +SG+ +K +R+++
Sbjct: 458 WHELARPQVHGHDINCVAMVQGKGNHRFVSGAEEKVVRVFE 498
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 8/43 (18%)
Frame = +2
Query: 98 LRGHNGWVTQIA------TNPKYPD--MILSSSRDKTLIVWKL 202
L+GH W+ + T + P+ M++SSS+DK + +WKL
Sbjct: 219 LKGHTDWIRSLDFSLPLHTTEEIPNSIMLVSSSQDKVIRIWKL 261
Score = 27.9 bits (59), Expect = 6.9
Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 11/110 (10%)
Frame = +2
Query: 302 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 481
+S S DK +R+W L + +++A ++ VSG+ I + + L
Sbjct: 248 VSSSQDKVIRIWKLVLVGDVGSWRRE----ITLASYIEGPVFVSGTFTYQISVESVLI-- 301
Query: 482 KYTIQDDGHSDWVSCVRFSP-----------NHANPIIVSCGWDRTVKVW 598
GH DWV V + P NH I+S D+T+ +W
Sbjct: 302 -------GHEDWVYSVEWQPPVIDFIDGRLVNHQPLSILSASMDKTMMIW 344
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 83 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRD 211
KL + H + + NP + +SSRDKT+ +W + D
Sbjct: 687 KLMAKVEAHKRIIWACSWNP-FGHQFATSSRDKTVKIWSVEND 728
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 38.7 bits (86), Expect = 0.004
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 4/127 (3%)
Frame = +2
Query: 236 KRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED-HTKDVLSVAFS- 409
K+L H ++ V +++G+ +SGS D+ + LWD G F H +V F
Sbjct: 53 KKLEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGNVKLSFHSGHANNVFQAKFMP 112
Query: 410 -VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDG-HSDWVSCVRFSPNHANPIIVSCGWDR 583
D+R IV+ + D ++ + L K G H + P + + I +CG D
Sbjct: 113 FSDDRTIVTCAADGMVRRASILEGDKVETSFLGLHQGRAHKLCIEPGNPH-IFYTCGEDG 171
Query: 584 TVKVWHL 604
V+ + L
Sbjct: 172 LVQRFDL 178
Score = 27.5 bits (58), Expect = 9.1
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +2
Query: 404 FSVDNRQIVSGSRDKTIKLWNTLA-ECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWD 580
F + +VSGS I +W E ++ D H V+C+ P+ P++ S G +
Sbjct: 342 FGPRSEYVVSGSDCGRIFIWRKKGGELIRVMEADRHV--VNCIE--PHPHIPVLASSGIE 397
Query: 581 RTVKVW 598
+KVW
Sbjct: 398 SDIKVW 403
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 38.7 bits (86), Expect = 0.004
Identities = 40/151 (26%), Positives = 63/151 (41%), Gaps = 5/151 (3%)
Frame = +2
Query: 263 ISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRR---FEDHTKDVLSVAFSVDNRQ--I 427
++ V S DGN L S+ K L G R+ + H V +AF+ N+Q +
Sbjct: 412 VTRVAWSPDGNL-LGVSFTKHLIHVYAYQGSDLRQHLEIDAHVGCVNDLAFAHPNKQMCV 470
Query: 428 VSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLT 607
V+ DK IK+W+ + +T + GH V + I S D +K W
Sbjct: 471 VTCGDDKLIKVWDLSGKKLFTFE--GHEAPVYSICPHQKENIQFIFSTALDGKIKAWLYD 528
Query: 608 NCKLKINHLGHSGYLNTVTVSPDGSLCASGG 700
N ++++ + T+ S DGS S G
Sbjct: 529 NVGSRVDYDAPGQWCTTMLYSADGSRLFSCG 559
Score = 30.7 bits (66), Expect = 0.98
Identities = 13/59 (22%), Positives = 26/59 (44%)
Frame = +2
Query: 287 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 463
D N G D ++ ++++ + + + H K + +AFS +VS D + W
Sbjct: 884 DNNIIAIGMEDSSIHIYNVRVDEVKTKLKGHQKHITGLAFSTALNILVSSGADAQLFFW 942
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +2
Query: 383 KDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHANPI 559
+ ++ AFS D R + S D T+K+ + +C + + WV VRF P H+ I
Sbjct: 104 RSTIAAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWV--VRFHPRHSE-I 160
Query: 560 IVSCGWDRTVKVWH 601
+ S D V++W+
Sbjct: 161 VASGSLDHEVRLWN 174
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +2
Query: 305 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 466
SGS D +RLW+ G+ R D + + S+AF + S K + +W+
Sbjct: 163 SGSLDHEVRLWNAKTGECIRT-HDFYRPIASIAFHAGGELLAVASGHK-LHIWH 214
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +2
Query: 383 KDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFSPNHANPI 559
+ ++ AFS D R + S D T+K+ + +C + + WV VRF P H+ I
Sbjct: 104 RSTIAAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWV--VRFHPRHSE-I 160
Query: 560 IVSCGWDRTVKVWH 601
+ S D V++W+
Sbjct: 161 VASGSLDHEVRLWN 174
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +2
Query: 305 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 466
SGS D +RLW+ G+ R D + + S+AF + S K + +W+
Sbjct: 163 SGSLDHEVRLWNAKTGECIRT-HDFYRPIASIAFHAGGELLAVASGHK-LHIWH 214
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 38.3 bits (85), Expect = 0.005
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 19/91 (20%)
Frame = +2
Query: 251 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR--------------RFED---- 376
H H ++ V LS D + S S D T+ WD+++GK+ +F++
Sbjct: 144 HQHSVTGVALSDDDSRGFSVSKDGTILHWDVSSGKSDEYKWPSDEVLKSHGLKFQESWYT 203
Query: 377 -HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 466
H K L++A S D R + +G D + LW+
Sbjct: 204 RHNKQSLALAVSSDGRYLATGGVDCHVHLWD 234
Score = 34.3 bits (75), Expect = 0.079
Identities = 18/72 (25%), Positives = 35/72 (48%)
Frame = +2
Query: 248 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI 427
GH +S + SGS+D TL +W+ H ++LS+ ++ ++
Sbjct: 261 GHCGIVSSLCFREGTAELFSGSYDGTLSIWNAEHRTYIESCFGHQSELLSID-ALGRERV 319
Query: 428 VSGSRDKTIKLW 463
+S RD+T++L+
Sbjct: 320 LSVGRDRTMQLY 331
Score = 33.9 bits (74), Expect = 0.10
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 17/126 (13%)
Frame = +2
Query: 272 VVLSSDGNYALSGSWDKTLRLWDLAAGKTTR---------------RFEDHTKDVLSVAF 406
+ +SSDG Y +G D + LWD+ + + F H V S+ F
Sbjct: 212 LAVSSDGRYLATGGVDCHVHLWDIRTREHVQVNKLKNNQVKDSVHCAFTGHCGIVSSLCF 271
Query: 407 SVDNRQIVSGSRDKTIKLWNTLAECKYTIQD-DGH-SDWVSCVRFSPNHANPIIVSCGWD 580
++ SGS D T+ +WN AE + I+ GH S+ +S ++S G D
Sbjct: 272 REGTAELFSGSYDGTLSIWN--AEHRTYIESCFGHQSELLSIDALGRER----VLSVGRD 325
Query: 581 RTVKVW 598
RT++++
Sbjct: 326 RTMQLY 331
Score = 32.7 bits (71), Expect = 0.24
Identities = 41/167 (24%), Positives = 72/167 (43%), Gaps = 3/167 (1%)
Frame = +2
Query: 104 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGH-SHFISDVVL 280
GH G V+ + ++ S S D TL +W + Y + +GH S +S L
Sbjct: 261 GHCGIVSSLCFREGTAELF-SGSYDGTLSIWNA--EHRTY---IESCFGHQSELLSIDAL 314
Query: 281 SSDGNYALSGSWDKTLRLWD--LAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 454
+ LS D+T++L+ + ++TR ++ V++ + +SGS + +I
Sbjct: 315 GRER--VLSVGRDRTMQLYKVGIVVPESTRLIYRASESNFECCCFVNSDEFLSGSDNGSI 372
Query: 455 KLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKV 595
LW+ L + I ++ H V S NH +C W +V V
Sbjct: 373 ALWSILKKKPVFIVNNAHH--VIADHDSVNH--NCTPACSWVSSVAV 415
Score = 28.3 bits (60), Expect = 5.2
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +2
Query: 326 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 466
LR+ DL + R H V VA S D+ + S S+D TI W+
Sbjct: 127 LRVQDLQSSDKFRVIVKHQHSVTGVALSDDDSRGFSVSKDGTILHWD 173
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 38.3 bits (85), Expect = 0.005
Identities = 37/130 (28%), Positives = 54/130 (41%), Gaps = 16/130 (12%)
Frame = +2
Query: 158 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 337
+ + S D T+ W L +D G + GH +S +V+ + Y SGSWD T+RLW
Sbjct: 600 VYTGSGDNTIKAWSL-QD----GSLLCTMSGHKSVVSTLVVVNGVLY--SGSWDGTVRLW 652
Query: 338 DLAAGKTTRRFEDHT------KDVLSVAFSVDNRQIVS----------GSRDKTIKLWNT 469
L+ + T D L + + N I+S G DKTI +
Sbjct: 653 SLSDNSLLTVLGEETPGIIWRDDTLMKSMKIQNGAILSIAVNGKWLFTGGWDKTINVQGN 712
Query: 470 LAECKYTIQD 499
L K +QD
Sbjct: 713 LGRLKRNVQD 722
Score = 37.1 bits (82), Expect = 0.011
Identities = 32/123 (26%), Positives = 52/123 (42%)
Frame = +2
Query: 251 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 430
H V +S DG + W T L + K + + ++A+S + +
Sbjct: 544 HIEGTEPVCVSGDGGGGIF-VWSTTFPLEEQPLRKWYEPKDWRYTGIHALAYS-EYGHVY 601
Query: 431 SGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTN 610
+GS D TIK W+ L + GH VS + N ++ S WD TV++W L++
Sbjct: 602 TGSGDNTIKAWS-LQDGSLLCTMSGHKSVVSTLVV----VNGVLYSGSWDGTVRLWSLSD 656
Query: 611 CKL 619
L
Sbjct: 657 NSL 659
>At5g52250.1 68418.m06485 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to photomorphogenesis repressor PnCOP1
(GI:11127996) [Ipomoea nil]
Length = 385
Score = 37.9 bits (84), Expect = 0.006
Identities = 40/149 (26%), Positives = 60/149 (40%), Gaps = 6/149 (4%)
Frame = +2
Query: 269 DVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF--EDHTKDVLSVAFS-VDNRQIVSGS 439
D L + SGS D T+++WD G T + SV F I G
Sbjct: 173 DYTLYNGSLIGASGSDDGTVQMWDPRNGGTLEETVRPGGGAAICSVEFDPFGGSSIAVGC 232
Query: 440 RDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKL 619
D+ +++ I DGH+ V+ RF +H IV+ D ++K W + N +
Sbjct: 233 ADRNAYVYDIRRLVDPLIVLDGHTKTVTYARFMDSHT---IVTGSTDGSLKQWDIDNGRR 289
Query: 620 KI-NHLGHSGYLNTVTVS--PDGSLCASG 697
+ + GH N V +S G L SG
Sbjct: 290 VVRTYRGHVNSRNFVGLSVWRHGGLVVSG 318
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 37.9 bits (84), Expect = 0.006
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 12/110 (10%)
Frame = +2
Query: 98 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR-DENNYGI-------PQKRLY-- 247
+ H G V Q+ +P + ++ SS D+ L+VW L R E I P + L+
Sbjct: 300 MSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPELLFSH 359
Query: 248 -GHSHFISDVVLSSDGNYAL-SGSWDKTLRLWDLAAGKTTRRFEDHTKDV 391
GH ISD + + + + S + D +L++W +A ++ R E+ +D+
Sbjct: 360 GGHKAKISDFAWNKNEPWVIASVAEDNSLQVWQMA--ESIYRDEEDAEDI 407
Score = 36.7 bits (81), Expect = 0.015
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 10/167 (5%)
Frame = +2
Query: 230 PQKRLYGHSHFISDVVLSS-DGNYALSGSWDKTLRLWDLAAGKTTR------RFEDHTKD 388
P RL GH + S Y LSGS D+ + LWD++A + +E H
Sbjct: 160 PDLRLVGHDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESA 219
Query: 389 VLSVAFSVDNRQIV-SGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIV 565
+ V++ + N + S D + +W+T + Q H V+ + F+P + ++
Sbjct: 220 IADVSWHMKNENLFGSAGEDGRLVIWDTRTN-QMQHQVKVHEREVNYLSFNPFN-EWVLA 277
Query: 566 SCGWDRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPD-GSLCASGG 700
+ D TV ++ L ++ + H G + V P+ ++ AS G
Sbjct: 278 TASSDSTVALFDLRKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSG 324
Score = 29.9 bits (64), Expect = 1.7
Identities = 37/186 (19%), Positives = 78/186 (41%), Gaps = 19/186 (10%)
Frame = +2
Query: 104 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 283
GH + ++ + K ++ S+ D L++W ++ Q ++ H ++ + +
Sbjct: 215 GHESAIADVSWHMKNENLFGSAGEDGRLVIWDTRTNQ-----MQHQVKVHEREVNYLSFN 269
Query: 284 SDGNYAL-SGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS-RDKTI 454
+ L + S D T+ L+DL H +V V + ++ +++ S D+ +
Sbjct: 270 PFNEWVLATASSDSTVALFDLRKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRL 329
Query: 455 KLW--NTLAECKYTIQDD-------------GHSDWVSCVRFSPNHANP-IIVSCGWDRT 586
+W N + E + I+ D GH +S F+ N P +I S D +
Sbjct: 330 MVWDLNRVGEEQLEIELDAEDGPPELLFSHGGHKAKIS--DFAWNKNEPWVIASVAEDNS 387
Query: 587 VKVWHL 604
++VW +
Sbjct: 388 LQVWQM 393
>At1g80710.1 68414.m09470 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to damage-specific DNA-binding protein 2 (DDB2)
[Mus musculus]
Length = 516
Score = 37.9 bits (84), Expect = 0.006
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Frame = +2
Query: 332 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIKLWNTL---AECKYTIQD 499
+WDL AGK+ +E H + + S+ F+ N ++ + S D T LW+ A+ T+
Sbjct: 332 VWDLRAGKSVFHWELHERRINSIDFNPQNPHVMATSSTDGTACLWDLRSMGAKKPKTLST 391
Query: 500 DGHSDWVSCVRFSPN 544
HS V FSP+
Sbjct: 392 VNHSRAVHSAYFSPS 406
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 37.5 bits (83), Expect = 0.009
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 7/153 (4%)
Frame = +2
Query: 263 ISDVVLSSDGNYALSGSWDKTL-RLWDLAAGKTTRR---FEDHTKDVLSVAFSVDNRQ-- 424
++ VV S DG L ++ K + ++ G+ R + H +V +AFS N+Q
Sbjct: 422 VNRVVWSPDGGL-LGVAYSKHIVHIYSYHGGEDLRNHLEIDAHAGNVNDLAFSQPNQQLC 480
Query: 425 IVSGSRDKTIKLWNTLAECK-YTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 601
+V+ DKTIK+W+ + K +T +GH V V I S D +K W
Sbjct: 481 VVTCGEDKTIKVWDAVTGNKLHTF--EGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAWL 538
Query: 602 LTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG 700
N ++++ ++ DG+ S G
Sbjct: 539 YDNMGSRVDYDAPGRSCTSMAYCADGTRLFSCG 571
Score = 34.3 bits (75), Expect = 0.079
Identities = 22/98 (22%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Frame = +2
Query: 320 KTLRLWDLAAGKTTRRFE---DHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA--ECK 484
++ ++WDLA + ++T V V +S D + + +++ + +
Sbjct: 396 RSFKVWDLATCTVNLQASLASEYTAAVNRVVWSPDGGLLGVAYSKHIVHIYSYHGGEDLR 455
Query: 485 YTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 598
++ D H+ V+ + FS + +V+CG D+T+KVW
Sbjct: 456 NHLEIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVW 493
Score = 30.7 bits (66), Expect = 0.98
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = +2
Query: 287 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 466
D N G D +++++++ + + + H K V +AFS +VS D + +W+
Sbjct: 898 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWS 957
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 37.5 bits (83), Expect = 0.009
Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 7/153 (4%)
Frame = +2
Query: 263 ISDVVLSSDGNYALSGSWDKTL-RLWDLAAGKTTRR---FEDHTKDVLSVAFSVDNRQ-- 424
++ VV S DG L ++ K + ++ G+ R + H +V +AFS N+Q
Sbjct: 422 VNRVVWSPDGGL-LGVAYSKHIVHIYSYHGGEDLRNHLEIDAHAGNVNDLAFSQPNQQLC 480
Query: 425 IVSGSRDKTIKLWNTLAECK-YTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 601
+V+ DKTIK+W+ + K +T +GH V V I S D +K W
Sbjct: 481 VVTCGEDKTIKVWDAVTGNKLHTF--EGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAWL 538
Query: 602 LTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG 700
N ++++ ++ DG+ S G
Sbjct: 539 YDNMGSRVDYDAPGRSCTSMAYCADGTRLFSCG 571
Score = 34.3 bits (75), Expect = 0.079
Identities = 22/98 (22%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Frame = +2
Query: 320 KTLRLWDLAAGKTTRRFE---DHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA--ECK 484
++ ++WDLA + ++T V V +S D + + +++ + +
Sbjct: 396 RSFKVWDLATCTVNLQASLASEYTAAVNRVVWSPDGGLLGVAYSKHIVHIYSYHGGEDLR 455
Query: 485 YTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVW 598
++ D H+ V+ + FS + +V+CG D+T+KVW
Sbjct: 456 NHLEIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVW 493
Score = 30.7 bits (66), Expect = 0.98
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = +2
Query: 287 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 466
D N G D +++++++ + + + H K V +AFS +VS D + +W+
Sbjct: 898 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWS 957
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 37.1 bits (82), Expect = 0.011
Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 5/108 (4%)
Frame = +2
Query: 392 LSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDD----GHSDWVSCVRFSPNHANP 556
LSV +S D ++I SGS D I+ W+ T Y I G S + CV +
Sbjct: 202 LSVTWSPDAKRIFSGSSDGLIRCWDATSCHEVYRITAGLGGLGSSSEI-CVWSLLSLRCS 260
Query: 557 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG 700
++VS TV+ W + L H H G +NT+ +P + S G
Sbjct: 261 VLVSGDSTGTVQFWDSEHGTLLEAHSNHKGDVNTLAAAPSHNRVFSAG 308
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 37.1 bits (82), Expect = 0.011
Identities = 27/143 (18%), Positives = 62/143 (43%), Gaps = 8/143 (5%)
Frame = +2
Query: 155 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 334
+I S S +++W N + +L H +S +G + + ++ +++
Sbjct: 211 VIASCSEGTDIVLWHGKTGRNLGHVDTNQLKNHM-----AAVSPNGRFLAAAAFTADVKV 265
Query: 335 WDLAAGKT--------TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYT 490
W++ K + + H V + FS ++ QI++ S+D +I++WN +Y
Sbjct: 266 WEIVYQKDGSVKEVSRVMQLKGHKSAVTWLCFSPNSEQIITASKDGSIRVWN--INVRYH 323
Query: 491 IQDDGHSDWVSCVRFSPNHANPI 559
+ +D + V + + NP+
Sbjct: 324 LDEDPKTLKVFPIPLCDSGGNPL 346
Score = 33.1 bits (72), Expect = 0.18
Identities = 35/148 (23%), Positives = 65/148 (43%), Gaps = 8/148 (5%)
Frame = +2
Query: 281 SSDGNYALSGSWDKT-LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 457
++DG+ ++ + T + LW G+ + + A S + R + + + +K
Sbjct: 205 TADGSVVIASCSEGTDIVLWHGKTGRNLGHVDTNQLKNHMAAVSPNGRFLAAAAFTADVK 264
Query: 458 LWN-------TLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCK 616
+W ++ E +Q GH V+ + FSPN I++ D +++VW++ N +
Sbjct: 265 VWEIVYQKDGSVKEVSRVMQLKGHKSAVTWLCFSPNSEQ--IITASKDGSIRVWNI-NVR 321
Query: 617 LKINHLGHSGYLNTVTVSPDGSLCASGG 700
HL T+ V P LC SGG
Sbjct: 322 Y---HLDEDP--KTLKVFPI-PLCDSGG 343
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 37.1 bits (82), Expect = 0.011
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 4/110 (3%)
Frame = +2
Query: 287 DGN-YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIKL 460
+GN Y +G +R+ D+ + + H V + Q+V + S+D++++L
Sbjct: 96 NGNPYVAAGGVKGIIRVIDVNSETIHKSLVGHGDSVNEIRTQPLKPQLVITASKDESVRL 155
Query: 461 WNTLAECKYTI--QDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 604
WN I GH V V F P+ SCG D T+K+W +
Sbjct: 156 WNVETGICILIFAGAGGHRYEVLSVDFHPSDIYRF-ASCGMDTTIKIWSM 204
Score = 32.7 bits (71), Expect = 0.24
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +2
Query: 71 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 202
SET+ +L GH V +I T P P +++++S+D+++ +W +
Sbjct: 117 SETI--HKSLVGHGDSVNEIRTQPLKPQLVITASKDESVRLWNV 158
Score = 30.7 bits (66), Expect = 0.98
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 15/129 (11%)
Frame = +2
Query: 137 NPKYPDMILSSSRDKTLIVWKLTRDENN-----------YGIPQKRLYGHSHFISDVVLS 283
N + D ILS S D +++W+ EN+ Y +P ++ F D+ LS
Sbjct: 246 NRWFGDFILSKSVDNEILLWEPQLKENSPGEGASDVLLRYPVPMCDIW-FIKFSCDLHLS 304
Query: 284 SDGNYALSGSWDKTLRLWDLAAGK---TTRRFEDHTKDVL-SVAFSVDNRQIVSGSRDKT 451
S G+ + + +WDL + T+ + +K V+ A SVD I++ D T
Sbjct: 305 S----VAIGNQEGKVYVWDLKSCPPVLITKLSHNQSKSVIRQTAMSVDGSTILACCEDGT 360
Query: 452 IKLWNTLAE 478
I W+ + +
Sbjct: 361 IWRWDVITK 369
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); phytochrome
A supressor spa1 (GI:4809171) [Arabidopsis thaliana]
Length = 837
Score = 36.3 bits (80), Expect = 0.020
Identities = 41/167 (24%), Positives = 69/167 (41%), Gaps = 2/167 (1%)
Frame = +2
Query: 200 LTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 379
+ D + P L G S S S + S ++D +++WD+A + ++H
Sbjct: 566 IVNDNRDIHYPVVELAGRSKLSSLCWNSYIKSQIASSNFDGVVQIWDVARSQLVTEMKEH 625
Query: 380 TKDVLSVAF-SVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 556
K V S+ S D + SGS D T TI+ + V CV+F P+ +
Sbjct: 626 KKRVWSIDISSADPTLLASGSDDGT-------GVSIGTIKTKAN---VCCVQF-PSDSGR 674
Query: 557 IIVSCGWDRTVKVWHLTNCKLKI-NHLGHSGYLNTVTVSPDGSLCAS 694
+ D V + L N K+ + +GHS ++ V +L +S
Sbjct: 675 SLAFGSADHKVYYYDLRNPKIPLCTMIGHSKTVSYVKFVDSSTLVSS 721
Score = 33.5 bits (73), Expect = 0.14
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 1/117 (0%)
Frame = +2
Query: 119 VTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNY 298
VT++ + K I SS D TL+ + ++ G+ + ++ S G
Sbjct: 619 VTEMKEHKKRVWSIDISSADPTLLA---SGSDDGTGVSIGTIKTKANVCCVQFPSDSGRS 675
Query: 299 ALSGSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 466
GS D + +DL K H+K V V F VD+ +VS S D T+KLW+
Sbjct: 676 LAFGSADHKVYYYDLRNPKIPLCTMIGHSKTVSYVKF-VDSSTLVSSSTDNTLKLWD 731
Score = 29.9 bits (64), Expect = 1.7
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +2
Query: 95 TLRGHNGWVTQIATNPKYPDM--ILSSSRDKTLIVWKLTRDENNYG-IPQKRLYGHSHFI 265
T+ GH+ V+ + K+ D ++SSS D TL +W L+ + P GH++
Sbjct: 699 TMIGHSKTVSYV----KFVDSSTLVSSSTDNTLKLWDLSMSASGINESPLHSFTGHTNLK 754
Query: 266 SDVVLSSDGNYALSGS 313
+ V LS Y +GS
Sbjct: 755 NFVGLSVSDGYIATGS 770
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 36.3 bits (80), Expect = 0.020
Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 4/124 (3%)
Frame = +2
Query: 239 RLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTR-RFED---HTKDVLSVAF 406
R H ++ + ++DG Y LS +RLWD+ +G+ T FE T + +
Sbjct: 307 RATAHYGVVTGLKATNDGMYLLSAGSYSRIRLWDIESGRNTLVNFETGRIQTDRAIQLDT 366
Query: 407 SVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRT 586
S D+ +V KT+K + + + T+ GH + V+ F+ N + + G DR
Sbjct: 367 S-DDPALVFVPCMKTVKGFG-MWSGRTTLMLRGHYESVNTCCFNSNDQE--LYTSGADRQ 422
Query: 587 VKVW 598
+ VW
Sbjct: 423 IIVW 426
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/49 (22%), Positives = 29/49 (59%)
Frame = +2
Query: 320 KTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 466
KT++ + + +G+TT H + V + F+ +++++ + D+ I +W+
Sbjct: 379 KTVKGFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTSGADRQIIVWS 427
>At2g25420.1 68415.m03045 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (3 repeats)
Length = 717
Score = 35.9 bits (79), Expect = 0.026
Identities = 33/146 (22%), Positives = 62/146 (42%), Gaps = 10/146 (6%)
Frame = +2
Query: 290 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 469
G+ G D ++ + L++ K + E H + + +AFS +VS D + LW+T
Sbjct: 481 GDLLAVGLDDGSIFIHCLSSRKVKEKLEGHDQKITCLAFSRCFNVLVSSDSDGKLCLWST 540
Query: 470 LAECKYTIQDDGH----------SDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKL 619
+ K T ++ + V+ ++F P ++V GW +V L +C+L
Sbjct: 541 KSWVKLTSKNSTRKFCNRSNLESTSLVTHIQFDPYQIELLVVHDGWIGLYEVRTL-DCRL 599
Query: 620 KINHLGHSGYLNTVTVSPDGSLCASG 697
+ + + T S DG + G
Sbjct: 600 QWIPDASDPAITSATYSSDGEIIYVG 625
>At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 35.5 bits (78), Expect = 0.034
Identities = 41/198 (20%), Positives = 82/198 (41%), Gaps = 7/198 (3%)
Frame = +2
Query: 125 QIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS--SDGNY 298
++A +P+ +I + L W+ +++N +K + + LS DG
Sbjct: 97 RMAIHPRQGGLICALPNSCRLFDWENIIEDDNEEESEKVVKELKDVGQQLSLSFNQDGTV 156
Query: 299 ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 478
+G+ D TLR+++ + KT V S+ FS + +VS ++W+ A
Sbjct: 157 LATGAEDGTLRVFEWPSMKTLLNESKTHASVKSLTFSESGKFLVSLGA-PLCRVWDVNAS 215
Query: 479 CKYTIQDDGHSDWVSCVRFSPNHANP--IIVSCGWDR--TVKVWHLTNCKLKINHL-GHS 643
+ + RFS +++ + V+ R ++ W T+ + + + L +
Sbjct: 216 AAIASLSKEKDEMFASCRFSVDNSGSEVLYVAANTQRGGSIITWDTTSWRRRSSKLIKRN 275
Query: 644 GYLNTVTVSPDGSLCASG 697
++ VS DG L A G
Sbjct: 276 NSISAFNVSADGKLLAVG 293
>At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 35.5 bits (78), Expect = 0.034
Identities = 41/198 (20%), Positives = 82/198 (41%), Gaps = 7/198 (3%)
Frame = +2
Query: 125 QIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS--SDGNY 298
++A +P+ +I + L W+ +++N +K + + LS DG
Sbjct: 97 RMAIHPRQGGLICALPNSCRLFDWENIIEDDNEEESEKVVKELKDVGQQLSLSFNQDGTV 156
Query: 299 ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 478
+G+ D TLR+++ + KT V S+ FS + +VS ++W+ A
Sbjct: 157 LATGAEDGTLRVFEWPSMKTLLNESKTHASVKSLTFSESGKFLVSLGA-PLCRVWDVNAS 215
Query: 479 CKYTIQDDGHSDWVSCVRFSPNHANP--IIVSCGWDR--TVKVWHLTNCKLKINHL-GHS 643
+ + RFS +++ + V+ R ++ W T+ + + + L +
Sbjct: 216 AAIASLSKEKDEMFASCRFSVDNSGSEVLYVAANTQRGGSIITWDTTSWRRRSSKLIKRN 275
Query: 644 GYLNTVTVSPDGSLCASG 697
++ VS DG L A G
Sbjct: 276 NSISAFNVSADGKLLAVG 293
>At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat
family protein similar to PAK/PLC-interacting protein 1
(GI:4211689) {Homo sapiens}
Length = 1115
Score = 35.5 bits (78), Expect = 0.034
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +2
Query: 425 IVSGSRDKTIKLWNTLAECKYTIQD-DGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWH 601
+ SG D +I++WN + + D H V+C FS + ++S D+T++VW
Sbjct: 866 LFSGFSDGSIRVWNVNKKIATLLWDIKEHKSTVTC--FSLSETGECVLSGSADKTIRVWQ 923
Query: 602 LTNCKLK 622
+ KL+
Sbjct: 924 IVKGKLE 930
Score = 35.1 bits (77), Expect = 0.045
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +2
Query: 251 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD 388
H ++ LS G LSGS DKT+R+W + GK TKD
Sbjct: 894 HKSTVTCFSLSETGECVLSGSADKTIRVWQIVKGKLECAEVIKTKD 939
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +2
Query: 305 SGSWDKTLRLWDLAAGKTTRRFE--DHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 463
SG D ++R+W++ T ++ +H V + S ++SGS DKTI++W
Sbjct: 868 SGFSDGSIRVWNVNKKIATLLWDIKEHKSTVTCFSLSETGECVLSGSADKTIRVW 922
>At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to Lipopolysaccharide-responsive and beige-like anchor
protein (CDC4-like protein) (Beige-like protein)
(SP:P50851) [Homo sapiens}
Length = 1280
Score = 35.1 bits (77), Expect = 0.045
Identities = 32/150 (21%), Positives = 67/150 (44%), Gaps = 1/150 (0%)
Frame = +2
Query: 230 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS-VAF 406
P L GH I+ + +S+D + +SGS D T L G+ R + + +S +A
Sbjct: 1103 PSHILCGHDDIITCLYVSTDLDIVISGSKDGTCVFHTLREGRYIRSLKHPSGSAVSKLAA 1162
Query: 407 SVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRT 586
S R ++ G D ++ L++ + + + +G ++C+ S +VS G
Sbjct: 1163 SHHGRIVLYGDDDLSLHLYSINGKHLASSESNGR---INCLELS--KCGEFLVSAGDQGQ 1217
Query: 587 VKVWHLTNCKLKINHLGHSGYLNTVTVSPD 676
+ V + ++ + G + ++TV+ +
Sbjct: 1218 IIVRSMNTLEVVKRYNGAGKIITSLTVTQE 1247
Score = 32.7 bits (71), Expect = 0.24
Identities = 37/173 (21%), Positives = 76/173 (43%), Gaps = 23/173 (13%)
Frame = +2
Query: 251 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT------KDVL------ 394
H +S V +++D +GS+D T+ +WD+ +T + +T KD++
Sbjct: 1045 HKDVVSCVAVTADSTILATGSYDTTVMVWDILRMRTPEKRVRNTHAEVLRKDIVIADAPS 1104
Query: 395 -----------SVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSP 541
+ S D ++SGS+D T +++TL E +Y I+ H + + +
Sbjct: 1105 HILCGHDDIITCLYVSTDLDIVISGSKDGTC-VFHTLREGRY-IRSLKHPSGSAVSKLAA 1162
Query: 542 NHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG 700
+H I++ D ++ ++ + L + +G +N + +S G S G
Sbjct: 1163 SHHGRIVLYGDDDLSLHLYSINGKHLASSE--SNGRINCLELSKCGEFLVSAG 1213
>At1g03110.1 68414.m00288 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat domain 4 protein (GI:9955698) [Mus
musculus]
Length = 427
Score = 35.1 bits (77), Expect = 0.045
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Frame = +2
Query: 158 ILSSSRDKTLIVWKLTRD--ENNYGIPQKRLYGHSHFISDVVLSSDGN----YALSGSWD 319
ILS+ RD + V + E + I Q GHS FI+ S Y +SGS D
Sbjct: 170 ILSADRDFKIRVTVFPKKPLEGAHEI-QSFCLGHSEFITCTAFVSTPELTQGYLMSGSGD 228
Query: 320 KTLRLWDLAAG 352
T+RLWD+ +G
Sbjct: 229 STVRLWDITSG 239
Score = 32.3 bits (70), Expect = 0.32
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 16/113 (14%)
Frame = +2
Query: 176 DKTLIVWKLTRDENNYG--IPQKR----LYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 337
DK +VW + D N G +P K+ L + I+ + S DG Y LS D +R+
Sbjct: 123 DKFGVVWVIELDGINDGKTLPSKKGALLLSHYCSIITSLEFSPDGRYILSADRDFKIRVT 182
Query: 338 -----DLAAGKTTRRF-EDHTKDVLSVAF----SVDNRQIVSGSRDKTIKLWN 466
L + F H++ + AF + ++SGS D T++LW+
Sbjct: 183 VFPKKPLEGAHEIQSFCLGHSEFITCTAFVSTPELTQGYLMSGSGDSTVRLWD 235
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 34.7 bits (76), Expect = 0.060
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 1/116 (0%)
Frame = +2
Query: 242 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDN 418
L GH + +G +G+ DKT R+WD ++ + + V S+ F+ D
Sbjct: 315 LKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRFTSDG 374
Query: 419 RQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRT 586
R + + +++T + K + D + +S + FSP+ + I WDRT
Sbjct: 375 RYVAMAEPADFVHIYDTKSGYKKEQEIDFFGE-ISGISFSPDTESLFIGV--WDRT 427
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/87 (24%), Positives = 37/87 (42%)
Frame = +2
Query: 278 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 457
LS DG D L D + G+T + H + A+ + +G++DKT +
Sbjct: 285 LSPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCR 344
Query: 458 LWNTLAECKYTIQDDGHSDWVSCVRFS 538
+W+T + G+ V +RF+
Sbjct: 345 IWDTRKLSESVAVLKGNLGAVRSIRFT 371
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 34.7 bits (76), Expect = 0.060
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 1/116 (0%)
Frame = +2
Query: 242 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDN 418
L GH + +G +G+ DKT R+WD ++ + + V S+ F+ D
Sbjct: 309 LKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRFTSDG 368
Query: 419 RQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRT 586
R + + +++T + K + D + +S + FSP+ + I WDRT
Sbjct: 369 RYVAMAEPADFVHIYDTKSGYKKEQEIDFFGE-ISGISFSPDTESLFIGV--WDRT 421
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/87 (24%), Positives = 37/87 (42%)
Frame = +2
Query: 278 LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 457
LS DG D L D + G+T + H + A+ + +G++DKT +
Sbjct: 279 LSPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCR 338
Query: 458 LWNTLAECKYTIQDDGHSDWVSCVRFS 538
+W+T + G+ V +RF+
Sbjct: 339 IWDTRKLSESVAVLKGNLGAVRSIRFT 365
>At5g45760.2 68418.m05626 transducin family protein / WD-40 repeat
family protein
Length = 334
Score = 34.7 bits (76), Expect = 0.060
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 503 GHSDWVSCVRFSP-NHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLN 655
GH+ VSCV FS ++S G D+TVK+W C N+ +S L+
Sbjct: 246 GHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDCFKCLDPNNNNNNSDLLH 297
Score = 31.1 bits (67), Expect = 0.74
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +2
Query: 377 HTKDVLSVAFSV---DNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSD 514
H V VAFS+ R ++SG DKT+K+W+ +C ++ +SD
Sbjct: 247 HNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDCF-KCLDPNNNNNNSD 294
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +2
Query: 248 GHSHFISDVVLS---SDGNYALSGSWDKTLRLWD 340
GH+ +S V S G + +SG DKT+++WD
Sbjct: 246 GHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWD 279
>At5g45760.1 68418.m05625 transducin family protein / WD-40 repeat
family protein
Length = 360
Score = 34.7 bits (76), Expect = 0.060
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 503 GHSDWVSCVRFSP-NHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLN 655
GH+ VSCV FS ++S G D+TVK+W C N+ +S L+
Sbjct: 272 GHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDCFKCLDPNNNNNNSDLLH 323
Score = 31.1 bits (67), Expect = 0.74
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +2
Query: 377 HTKDVLSVAFSV---DNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSD 514
H V VAFS+ R ++SG DKT+K+W+ +C ++ +SD
Sbjct: 273 HNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDCF-KCLDPNNNNNNSD 320
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +2
Query: 248 GHSHFISDVVLS---SDGNYALSGSWDKTLRLWD 340
GH+ +S V S G + +SG DKT+++WD
Sbjct: 272 GHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWD 305
>At1g27470.1 68414.m03349 transducin-related / WD-40 repeat
protein-related contains 6 WD-40 repeats (PF00400) (2
weak); related to KIAA1988 protein (GI:18916910) [Homo
sapiens]
Length = 810
Score = 34.7 bits (76), Expect = 0.060
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 4/111 (3%)
Frame = +2
Query: 380 TKDVLSVAFSVDNRQIVSGSRDKTIKLW--NTLAEC-KYTIQDDGHSDWVS-CVRFSPNH 547
T LSV +S D ++I SGS D I+ W N E + T+ G + C+ +
Sbjct: 198 TGRALSVTWSADAQRIFSGSSDGLIRCWDANLCHEVYRITVGLGGLGNGSELCIWSLLSL 257
Query: 548 ANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG 700
++VS +V+ W + L H H G +N + SP + S G
Sbjct: 258 RYGVLVSGDSTGSVQFWDSQHGTLLQAHSNHKGDVNALAASPSHNRVFSAG 308
>At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 580
Score = 34.3 bits (75), Expect = 0.079
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +2
Query: 251 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRF--EDHTKDVLSVAFSVDNRQ 424
H +++ +V + + + +S S DKTLR+WDL T + F + H V FS+ +
Sbjct: 453 HDGYVTKLV-APESHLLVSSSLDKTLRIWDLRKSWTPQPFVVKGHNDGV--SGFSIWGKD 509
Query: 425 IVSGSRD 445
++S SR+
Sbjct: 510 VISISRN 516
Score = 32.3 bits (70), Expect = 0.32
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +2
Query: 101 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 208
R H+G+VT++ + +++SSS DKTL +W L +
Sbjct: 451 RAHDGYVTKLVAPESH--LLVSSSLDKTLRIWDLRK 484
>At3g13300.2 68416.m01675 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1309
Score = 34.3 bits (75), Expect = 0.079
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +2
Query: 86 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ 235
LR RGH+ VT +A + DM+ S S D + VWK++ PQ
Sbjct: 194 LRSLFRGHSQRVTDMAFFAEDVDMLASVSLDGKVFVWKISEGSEGEDQPQ 243
>At3g13300.1 68416.m01674 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1344
Score = 34.3 bits (75), Expect = 0.079
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +2
Query: 86 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ 235
LR RGH+ VT +A + DM+ S S D + VWK++ PQ
Sbjct: 229 LRSLFRGHSQRVTDMAFFAEDVDMLASVSLDGKVFVWKISEGSEGEDQPQ 278
>At5g23730.1 68418.m02782 transducin family protein / WD-40 repeat
family protein contains similarity to photomorphogenesis
repressor protein; contains Pfam PF00400: WD domain,
G-beta repeat (5 copies)
Length = 243
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +2
Query: 230 PQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 409
P L GH+ +S V G +G+ D L+LW + G+ R +E H + V S
Sbjct: 105 PALTLQGHTKTVSYVRFLDGGTVVTAGT-DGCLKLWSVEDGRVIRTYEGHVNNRNFVGLS 163
Query: 410 V 412
V
Sbjct: 164 V 164
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +2
Query: 503 GHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVS 670
GH+ VS VRF +V+ G D +K+W + + ++ + GH N V +S
Sbjct: 111 GHTKTVSYVRFLDGGT---VVTAGTDGCLKLWSVEDGRVIRTYEGHVNNRNFVGLS 163
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 33.9 bits (74), Expect = 0.10
Identities = 31/154 (20%), Positives = 66/154 (42%), Gaps = 5/154 (3%)
Frame = +2
Query: 98 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 277
L+GH G VT + +P +++ S T++ W+L ++ + K + + F + +V
Sbjct: 142 LKGHKGPVTGLDFHPN-GELLASIDTTGTVLCWELQNGVVSFTL--KGVAPDTGFNTSIV 198
Query: 278 ----LSSDGNYALSGSWDKTLRLWDLAAGKTTRRFE-DHTKDVLSVAFSVDNRQIVSGSR 442
S DG + ++D G+ DH + + + ++ + + I +
Sbjct: 199 NIPRWSPDGRTLAVPGLRNDVVMYDRFTGEKLFALRGDHLEAICYLTWAPNGKYIATSGL 258
Query: 443 DKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPN 544
DK + LW+ + K I + + C+ + PN
Sbjct: 259 DKQVLLWD--VDKKQDIDRHKFEERICCMSWKPN 290
Score = 30.3 bits (65), Expect = 1.3
Identities = 25/106 (23%), Positives = 47/106 (44%)
Frame = +2
Query: 377 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANP 556
H V S+A S D+ + SGS D +KL+ ++ + + + F N +
Sbjct: 61 HQDGVTSLALSNDSTLLASGSIDHCVKLYK-FPSGEFQTNITRFTLPIRVLAF--NGSGS 117
Query: 557 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCAS 694
++ + G D +K+ + + + GH G + + P+G L AS
Sbjct: 118 LLAAAGDDEGIKLINTFDGSIVRVLKGHKGPVTGLDFHPNGELLAS 163
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 33.9 bits (74), Expect = 0.10
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 1/125 (0%)
Frame = +2
Query: 326 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDG 505
+RLWD+ +GK + E + V S S D R I + T+K W+ A ++
Sbjct: 170 VRLWDVRSGKIVQTLETKS-PVTSAEVSQDGRYITTAD-GSTVKFWD--ANHFGLVKSYD 225
Query: 506 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGS 682
+ P + G D V+V+ T ++ N GH G ++ V +P G
Sbjct: 226 MPCNIESASLEPKSGEKFVAG-GEDMWVRVFDFYTGEEIGCNK-GHHGPVHCVRFTPTGL 283
Query: 683 LCASG 697
ASG
Sbjct: 284 SYASG 288
Score = 33.9 bits (74), Expect = 0.10
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = +2
Query: 209 DENNYGIPQKRLYGHSHFISDVVLS-SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 385
D N++G+ + Y I L G ++G D +R++D G+ + H
Sbjct: 214 DANHFGLVKS--YDMPCNIESASLEPKSGEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHG 271
Query: 386 DVLSVAFSVDNRQIVSGSRDKTIKLWNT 469
V V F+ SGS D TI++W T
Sbjct: 272 PVHCVRFTPTGLSYASGSEDGTIRIWQT 299
Score = 33.5 bits (73), Expect = 0.14
Identities = 37/150 (24%), Positives = 63/150 (42%), Gaps = 4/150 (2%)
Frame = +2
Query: 227 IPQKRLYGHSHFISDVVLSS---DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 397
IPQ +GHS + D+ S DG + +S S D L + G FE H V S
Sbjct: 8 IPQV-CHGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWS 66
Query: 398 VAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGW 577
+ + S S D + KLW+ L + H V FS + + +++ G+
Sbjct: 67 SCLDNNALRAASASADFSAKLWDALT--GDVLHSFEHKHIVRACAFSEDTKS--LLTGGF 122
Query: 578 DRTVKVWHLTNCKLKINHLGHS-GYLNTVT 664
++ ++V+ + + S G + T+T
Sbjct: 123 EKILRVFDMNRLDAPPTEVDKSPGSIRTLT 152
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 33.9 bits (74), Expect = 0.10
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 1/125 (0%)
Frame = +2
Query: 326 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDG 505
+RLWD+ +GK + E + V S S D R I + T+K W+ A ++
Sbjct: 170 VRLWDVRSGKIVQTLETKS-PVTSAEVSQDGRYITTAD-GSTVKFWD--ANHFGLVKSYD 225
Query: 506 HSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGS 682
+ P + G D V+V+ T ++ N GH G ++ V +P G
Sbjct: 226 MPCNIESASLEPKSGEKFVAG-GEDMWVRVFDFYTGEEIGCNK-GHHGPVHCVRFTPTGL 283
Query: 683 LCASG 697
ASG
Sbjct: 284 SYASG 288
Score = 33.9 bits (74), Expect = 0.10
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = +2
Query: 209 DENNYGIPQKRLYGHSHFISDVVLS-SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 385
D N++G+ + Y I L G ++G D +R++D G+ + H
Sbjct: 214 DANHFGLVKS--YDMPCNIESASLEPKSGEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHG 271
Query: 386 DVLSVAFSVDNRQIVSGSRDKTIKLWNT 469
V V F+ SGS D TI++W T
Sbjct: 272 PVHCVRFTPTGLSYASGSEDGTIRIWQT 299
Score = 33.5 bits (73), Expect = 0.14
Identities = 37/150 (24%), Positives = 63/150 (42%), Gaps = 4/150 (2%)
Frame = +2
Query: 227 IPQKRLYGHSHFISDVVLSS---DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 397
IPQ +GHS + D+ S DG + +S S D L + G FE H V S
Sbjct: 8 IPQV-CHGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWS 66
Query: 398 VAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGW 577
+ + S S D + KLW+ L + H V FS + + +++ G+
Sbjct: 67 SCLDNNALRAASASADFSAKLWDALT--GDVLHSFEHKHIVRACAFSEDTKS--LLTGGF 122
Query: 578 DRTVKVWHLTNCKLKINHLGHS-GYLNTVT 664
++ ++V+ + + S G + T+T
Sbjct: 123 EKILRVFDMNRLDAPPTEVDKSPGSIRTLT 152
>At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-related
similar to BEIGE (GI:3928547) [Rattus norvegicus];
Similar to gb|U70015 lysosomal trafficking regulator from
Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta
repeats. ESTs gb|T43386 and gb|AA395236 come from this
gene
Length = 3601
Score = 33.5 bits (73), Expect = 0.14
Identities = 22/112 (19%), Positives = 54/112 (48%), Gaps = 3/112 (2%)
Frame = +2
Query: 155 MILSSSRDKTLIVWKLTRDENNYGIP---QKRLYGHSHFISDVVLSSDGNYALSGSWDKT 325
++++ + D + VW++++D +K L H+ ++ + +S SGS D T
Sbjct: 3344 IVVTGAEDGLVCVWRVSKDGPRGSRRLRLEKALCAHTAKVTCLRVSQPYMMIASGSDDCT 3403
Query: 326 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 481
+ +WDL++ R+ D + ++ + +IV+ + + +W+ +C
Sbjct: 3404 VIIWDLSSLSFVRQLPDFPVPISAIYINDLTGEIVTAA-GTVLAVWSINGDC 3454
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 WD-40
repeats (PF00400) (2 weak)
Length = 1108
Score = 33.1 bits (72), Expect = 0.18
Identities = 15/60 (25%), Positives = 27/60 (45%)
Frame = +2
Query: 287 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 466
D N G D T+ ++++ + + + H K + +AFS +VS D I W+
Sbjct: 873 DNNVIAIGMEDSTIHIYNVRVDEVKSKLKGHQKRITGLAFSTALNILVSSGADAQICFWS 932
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +2
Query: 500 DGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHLTNCK 616
D H V+ + F+ + +++CG D+ +KVW ++ K
Sbjct: 449 DAHVGAVNDLAFANPNRQLCVITCGDDKLIKVWDVSGRK 487
>At1g76260.1 68414.m08855 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to retinoblastoma A associated protein; RbAp48
(GI:3309245) [Xenopus laevis]
Length = 350
Score = 33.1 bits (72), Expect = 0.18
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 98 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 196
L GH W + NP+Y ++ILS D + +W
Sbjct: 248 LPGHTHWTWAVRCNPEYEELILSVGTDSAVNLW 280
>At1g20540.1 68414.m02559 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Rbap46 polypeptide (GI:9454362) [Gallus
gallus]
Length = 351
Score = 33.1 bits (72), Expect = 0.18
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 98 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 196
L GH W + NP+Y +ILS+ D + +W
Sbjct: 248 LPGHTHWTWAVRCNPEYDGLILSAGTDSVVNLW 280
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 33.1 bits (72), Expect = 0.18
Identities = 44/199 (22%), Positives = 75/199 (37%), Gaps = 8/199 (4%)
Frame = +2
Query: 47 LFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYG 226
L+ P S S + L H G V + N K P+ + S + D T+ +W L N
Sbjct: 94 LWNPISSESGEIAHVRDLSKHKGPVRGLEFNVKSPNQLASGADDGTVCIWDLA----NPS 149
Query: 227 IPQKRLYGHSHFISDVVLSSDGNYAL-----SGSWDKTLRLWDLAAGKTTRRFEDHTK-D 388
P L G ++ + S N S S + T +WD+ K + +
Sbjct: 150 KPSHYLKGTGSYMQSEISSLSWNKGFQHVLASTSHNGTTVIWDVNNEKIITDLKTTVRCS 209
Query: 389 VLSVAFSVDNRQIVSGSRDKT--IKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPII 562
VL N+ +V+ D + +KL + GH V + + P+ + +
Sbjct: 210 VLQWDPDHFNQILVASDEDSSPNVKLLDIRYLQSPVRTFVGHQRGVIAMEWCPSD-SLYL 268
Query: 563 VSCGWDRTVKVWHLTNCKL 619
++CG D W+ K+
Sbjct: 269 LTCGKDNRTICWNTKTGKI 287
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 32.7 bits (71), Expect = 0.24
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +2
Query: 308 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 478
G L LW + HT VL +A S + + S + D+ ++LWN E
Sbjct: 362 GFTQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVFGE 418
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 32.7 bits (71), Expect = 0.24
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2
Query: 224 GIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWD 340
G+ L H ++D+ SSD ++ +S S D T+++WD
Sbjct: 1071 GVLVAHLQEHRSAVNDIATSSDHSFFVSASDDSTVKVWD 1109
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 350 GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 469
G ++H V +A S D+ VS S D T+K+W++
Sbjct: 1071 GVLVAHLQEHRSAVNDIATSSDHSFFVSASDDSTVKVWDS 1110
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +2
Query: 155 MILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRL 334
M++ S+++ + +W D + + + G ++S +V S GN+ +SGS L L
Sbjct: 1203 MVMYSTQNCGIHLWDTRSDLDAWTLKANPEEG---YVSSLVTSPCGNWFVSGSSRGVLTL 1259
Query: 335 WDL 343
WDL
Sbjct: 1260 WDL 1262
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 32.7 bits (71), Expect = 0.24
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = +2
Query: 248 GHSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 355
GH+ ++ + S G + SGS D ++R+W++ G+
Sbjct: 421 GHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGR 456
Score = 31.5 bits (68), Expect = 0.56
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +2
Query: 368 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT-LAECKYTIQDDGHSDWVSCVRFSPN 544
++ HT V S++ I SGS D ++++W C Q D + + CV ++P
Sbjct: 419 YKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLKVWQFD---EAIMCVAWNPL 475
Query: 545 HANPII-VSCGWD 580
P++ V+ G D
Sbjct: 476 SRLPVLAVAMGRD 488
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 32.7 bits (71), Expect = 0.24
Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 1/124 (0%)
Frame = +2
Query: 218 NYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLA-AGKTTRRFEDHTKDVL 394
N G L GH F DG +G+ DKT R+WD+ K+ + +
Sbjct: 305 NTGKTLATLSGHLDFSFASAWHPDGFTFSTGNQDKTCRVWDIRNLSKSVAVLRGNLGAIR 364
Query: 395 SVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCG 574
S+ ++ D + + + +++ ++ T Q+ +S + FSP+ + +
Sbjct: 365 SIRYTSDGKYMAMAEPADFVHVYD-VSNGYETEQEIDFFGEISGISFSPD-TEALFIGV- 421
Query: 575 WDRT 586
WDRT
Sbjct: 422 WDRT 425
Score = 27.9 bits (59), Expect = 6.9
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +2
Query: 263 ISDVVLSSDGNY-ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 439
++ LS DG + G ++L L D GKT H + A+ D +G+
Sbjct: 278 VNHTSLSPDGKLLTIVGDNPESL-LVDPNTGKTLATLSGHLDFSFASAWHPDGFTFSTGN 336
Query: 440 RDKTIKLWN 466
+DKT ++W+
Sbjct: 337 QDKTCRVWD 345
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 32.3 bits (70), Expect = 0.32
Identities = 27/124 (21%), Positives = 54/124 (43%), Gaps = 1/124 (0%)
Frame = +2
Query: 218 NYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLA-AGKTTRRFEDHTKDVL 394
N G + L GH F DG +G+ DKT R+WD+ ++ + + +
Sbjct: 307 NTGKTLETLSGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDIRNLSQSVTVLKGNLGAIR 366
Query: 395 SVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCG 574
S+ ++ D + + + +++ ++ T Q+ +S + FSP+ + +
Sbjct: 367 SIRYTSDGKYMAMAEPADFVHVYD-VSNGYETEQEIDFFGEISGISFSPD-TEALFIGV- 423
Query: 575 WDRT 586
WDRT
Sbjct: 424 WDRT 427
Score = 28.3 bits (60), Expect = 5.2
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Frame = +2
Query: 218 NYGIPQKRLYGHSHF---ISDVVLSSDGNY-ALSGSWDKTLRLWDLAAGKTTRRFEDHTK 385
++ + + +L H F ++ LS DG A+ G + L + D GKT H
Sbjct: 262 DFDMERYQLVKHFRFPWPVNHASLSPDGKLLAIVGDNPEGL-IVDPNTGKTLETLSGHLD 320
Query: 386 DVLSVAFSVDNRQIVSGSRDKTIKLWN 466
+ A+ D +G++DKT ++W+
Sbjct: 321 FSFASAWHPDGVTFSTGNQDKTCRVWD 347
>At4g34280.1 68417.m04873 transducin family protein / WD-40 repeat
family protein similar to TUPA (GI:11066216) [Emericella
nidulans]; similar to damage-specific DNA binding
protein 2, Homo sapiens ,PIR2:I38909; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies,1
weak)|19797453|gb|AU229277.1|AU229277
Length = 783
Score = 31.9 bits (69), Expect = 0.42
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +2
Query: 251 HSHFISDVVLSSDGNYALS-GSWDKTLRLWDLAAGKTTRRF-EDHTKDVLSVAFSVDNRQ 424
H I+ V S+ + + S+DK ++LWDL + + TK + V FS D+R
Sbjct: 582 HQEHINVVKFSNHSPFLFATSSFDKDVKLWDLRQEPSRPCYTASSTKGNVMVCFSPDDRY 641
Query: 425 IVSGSRDKTIK 457
+++ + D ++
Sbjct: 642 LLASAVDNEVR 652
Score = 31.5 bits (68), Expect = 0.56
Identities = 22/111 (19%), Positives = 53/111 (47%), Gaps = 10/111 (9%)
Frame = +2
Query: 302 LSGSWDKTLRLWDLAAGKTTRRFEDHTKD----------VLSVAFSVDNRQIVSGSRDKT 451
++GS + +L+L+D+ +T H+ + SV + ++ ++ K
Sbjct: 504 IAGSANGSLKLYDIQKASSTVTTSSHSTSGSVTFDEFDQLTSVHANSTDQLFLASGYSKD 563
Query: 452 IKLWNTLAECKYTIQDDGHSDWVSCVRFSPNHANPIIVSCGWDRTVKVWHL 604
+ L++ + + + H + ++ V+FS NH+ + + +D+ VK+W L
Sbjct: 564 VALYDIGRGTRLQVFANMHQEHINVVKFS-NHSPFLFATSSFDKDVKLWDL 613
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 31.5 bits (68), Expect = 0.56
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = +2
Query: 209 DENNYGIPQKRLYGHSHFISDVVLSSDGNY-ALSGSWDKTLRLWDLAAGKTTRRFEDHTK 385
D N+ + + + S ++++ S DG A+ G + L L D +GK E H
Sbjct: 264 DATNFALLNRFAFHWS--VNNISTSPDGKLVAVLGDSPECL-LADTGSGKVIHGLEGHLD 320
Query: 386 DVLSVAFSVDNRQIVSGSRDKTIKLWN 466
S A+ + + + +G++D T +LW+
Sbjct: 321 YSFSSAWHPNGQILATGNQDTTCRLWD 347
Score = 28.7 bits (61), Expect = 3.9
Identities = 21/102 (20%), Positives = 45/102 (44%), Gaps = 1/102 (0%)
Frame = +2
Query: 242 LYGHSHFISDVVLSSDGNYALSGSWDKTLRLWDLA-AGKTTRRFEDHTKDVLSVAFSVDN 418
L GH + +G +G+ D T RLWD+ ++ + + + + ++ F+ D
Sbjct: 315 LEGHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRNLSQSLKVLKGNMGAIRALRFTSDG 374
Query: 419 RQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFSPN 544
R + + L++T A + D + ++ + FSP+
Sbjct: 375 RFLAMAEPADFVHLFDTEAGYSQCQEIDLFGE-IAGISFSPD 415
>At5g58760.1 68418.m07360 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
damage-specific DNA binding protein 2 (GI:10798819)
[Homo sapiens]
Length = 557
Score = 31.1 bits (67), Expect = 0.74
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +2
Query: 137 NPKYPDMILSSSRDKTLIVW---KLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALS 307
NP P+++LS D +W KL + + + KR+ ++F S G L+
Sbjct: 321 NPVQPELLLSCGNDHFARIWDMRKLQPKASLHDLAHKRVVNSAYF-----SPSSGTKILT 375
Query: 308 GSWDKTLRLWDLAAG 352
D +R+WD G
Sbjct: 376 TCQDNRIRIWDSIFG 390
>At4g11270.1 68417.m01823 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TGF-beta resistance-associated protein TRAG
(GI:15624071) {Mus musculus}; similar to
beta-transducin repeats containing protein - Homo
sapiens,PID:e1284220; 3' EST no_NP:TC8031
Length = 1446
Score = 31.1 bits (67), Expect = 0.74
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 302 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 409
+SGS D T+R+WDL +G H V + S
Sbjct: 553 ISGSMDCTIRIWDLESGNVIMIMHHHVAPVRQIILS 588
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 31.1 bits (67), Expect = 0.74
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +2
Query: 263 ISDVVLSSDGNYALSGSWDKTLRLWD--LAAGKTTRRFEDHTKDV 391
+ ++V S +G Y L+ S D+T+R+++ L A + ED K++
Sbjct: 219 VKNIVFSRNGQYLLTNSHDRTIRIYENLLPAKNVLKSLEDLGKNI 263
>At1g17720.2 68414.m02194 serine/threonine protein phosphatase 2A
(PP2A) 55 kDa regulatory subunit B identical to type 2A
protein serine/threonine phosphatase 55 kDa B regulatory
subunit (GI:1408460) [Arabidopsis thaliana]; similar to
55 kDa B regulatory subunit of phosphatase 2A GI:710330;
contains Pfam PF00400: WD domain, G-beta repeat (5
copies, 3 weak)
Length = 500
Score = 31.1 bits (67), Expect = 0.74
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 263 ISDVVLSSDGNYALSGSWDKTLRLWDL 343
ISD+ S DG Y LS + TL+LWD+
Sbjct: 332 ISDIKFSKDGRYILSRDY-MTLKLWDI 357
>At1g17720.1 68414.m02193 serine/threonine protein phosphatase 2A
(PP2A) 55 kDa regulatory subunit B identical to type 2A
protein serine/threonine phosphatase 55 kDa B regulatory
subunit (GI:1408460) [Arabidopsis thaliana]; similar to
55 kDa B regulatory subunit of phosphatase 2A GI:710330;
contains Pfam PF00400: WD domain, G-beta repeat (5
copies, 3 weak)
Length = 501
Score = 31.1 bits (67), Expect = 0.74
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 263 ISDVVLSSDGNYALSGSWDKTLRLWDL 343
ISD+ S DG Y LS + TL+LWD+
Sbjct: 333 ISDIKFSKDGRYILSRDY-MTLKLWDI 358
>At3g26640.1 68416.m03329 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to ATAN11 (GI:2290528) [Arabidopsis thaliana]
(Genes Dev. 11 (11), 1422-1434 (1997)); contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies)
Length = 346
Score = 30.7 bits (66), Expect = 0.98
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 5/141 (3%)
Frame = +2
Query: 149 PDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYAL-----SGS 313
PD++ +SS L +W+++ DE+ + + S + S D N A + S
Sbjct: 98 PDLLATSS--DFLRLWRISDDESRVELKSCLSSDKNSEFSGPITSFDWNEAEPRRIGTSS 155
Query: 314 WDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTI 493
D T +WD+ + H K+V +A+ S S D ++++++ + TI
Sbjct: 156 IDTTCTIWDIEREVVDTQLIAHDKEVYDIAWG-GVGVFASVSEDGSVRVFDLRDKEHSTI 214
Query: 494 QDDGHSDWVSCVRFSPNHANP 556
+ VR S N +P
Sbjct: 215 IYESGEPSTPLVRLSWNKQDP 235
>At3g13290.1 68416.m01673 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1322
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +2
Query: 86 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 250
LR RGH+ VT +A + ++ S S D + VWK++ E + G Q ++ G
Sbjct: 213 LRSLFRGHSQRVTDMAFFAEDVHLLASVSLDGKVFVWKIS--EGSEGDEQSQITG 265
>At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4
WD-40 repeats (PF00400);low similarity to
photomorphogenesis repressor (COP1) GI:2702280
[Arabidopsis thaliana] and COP1 GI:11127996 [Ipomoea
nil]
Length = 343
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Frame = +2
Query: 293 NYALSGSWDKTLRLWDLAAGKTTRR-FED---HTKDVLSVAFSV-DNRQIVSGSRDKTIK 457
N +GS D WD+ R F++ HT V ++ + D I +GS D+T++
Sbjct: 177 NLVYTGSDDCKFSCWDIRDSPADNRVFQNSKVHTMGVCCISSNPSDPYSIFTGSYDETLR 236
Query: 458 LWNT 469
+W+T
Sbjct: 237 VWDT 240
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/81 (20%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +2
Query: 101 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 280
+GH+ + + + P+++ + S D W + + + Q H+ + +
Sbjct: 160 KGHDFELWTASFDLNNPNLVYTGSDDCKFSCWDIRDSPADNRVFQNSKV-HTMGVCCISS 218
Query: 281 SSDGNYAL-SGSWDKTLRLWD 340
+ Y++ +GS+D+TLR+WD
Sbjct: 219 NPSDPYSIFTGSYDETLRVWD 239
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 272 VVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 409
+ +S DG Y +G L ++DL + T + H ++ S++FS
Sbjct: 391 LAVSEDGKYLAAGDCGGNLHIYDLQESEYTCFMDAHEAEIQSLSFS 436
>At5g17370.1 68418.m02036 WD-40 repeat family protein contains 1
significant, 2 weak WD-40 repeats (PF00400); similar to
transducin beta-like 1 protein.(SP:O60907) [Homo
sapiens]
Length = 467
Score = 29.5 bits (63), Expect = 2.3
Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Frame = +2
Query: 158 ILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLSSDGNYALSGSWDKTLRLW 337
+++SS D TL ++ + G+ + +SH + + + LSG D R+W
Sbjct: 358 LMASSMDGTLYDQRMVK--RGVGVQTYEGHVNSHTPIEFGIDPSERFILSGGDDCYTRIW 415
Query: 338 DLAAGK--TTRRFEDHTKDVLSVAFSVDNRQ 424
+ +G+ + +F + V V +S D RQ
Sbjct: 416 SIKSGQLMSENKFSNSVPSV--VCWSADERQ 444
>At5g04560.1 68418.m00456 DEMETER protein (DME) identical to DEMETER
protein [Arabidopsis thaliana] GI:21743571; contains
Pfam profile PF00730: HhH-GPD superfamily base excision
DNA repair protein
Length = 1729
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +2
Query: 317 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 454
D+T R+W+L GK + D KD + + R++ G D I
Sbjct: 702 DETTRIWNLLMGKGDEKEGDEEKDKKKEKWWEEERRVFRGRADSFI 747
>At4g21520.1 68417.m03110 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to guanine nucleotide-binding protein beta 5
(GI:1001939) [Mesocricetus auratus]
Length = 425
Score = 29.5 bits (63), Expect = 2.3
Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 1/104 (0%)
Frame = +2
Query: 35 RESSLFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDE 214
R L +P + L+ G G ++ +A +P M+ S +T +++ E
Sbjct: 187 RVFDLHRPGRDFRQYSTLQKNKEGQAGILSTLAFSPTNSGMLAVGSYGQTTGIYREDNME 246
Query: 215 NNYGIPQKRLYGHSHFISDVVLSSDGNYALSGS-WDKTLRLWDL 343
Y L+G ++ V S DGNY +G D + WD+
Sbjct: 247 LLYV-----LHGQEGGVTHVQFSKDGNYLYTGGRKDPYILCWDI 285
>At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal
trafficking regulator - Bos taurus, EMBL: AF114785
Length = 3471
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Frame = +2
Query: 71 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT-----RDENNYGIPQ 235
S L+L +L H V + + Y MI SSS D T+I+W L+ R N+ +P
Sbjct: 3311 SRRLRLEKSLCAHTAKVICLRVSQPYM-MIASSSDDCTVIIWDLSSLSFVRQLPNFSVPV 3369
Query: 236 KRLY 247
+Y
Sbjct: 3370 TVVY 3373
Score = 27.5 bits (58), Expect = 9.1
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 8/71 (11%)
Frame = +2
Query: 278 LSSDGNYALSGSWDKTLRLW----DLAAGKTTRRFED----HTKDVLSVAFSVDNRQIVS 433
+S DG ++G+ D + +W D G R E HT V+ + S I S
Sbjct: 3282 VSHDGRIVVTGAEDGLVSVWRVSKDGPRGSRRLRLEKSLCAHTAKVICLRVSQPYMMIAS 3341
Query: 434 GSRDKTIKLWN 466
S D T+ +W+
Sbjct: 3342 SSDDCTVIIWD 3352
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 251 HSHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGK 355
HS ++ + SSDG Y SG + L +W L GK
Sbjct: 282 HSAEVNVLNFSSDGAYLYSGGREGVLVVWQLDTGK 316
>At5g12920.1 68418.m01482 expressed protein contains 3 weak WD-40
repeats (PF00400); low similarity to MEK kinase alpha
(GI:4028547); transcriptional repressor TUP1
(GI:3406654) [Dictyostelium discoideum]; Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (TGF-beta receptor interacting protein 1)
(TRIP-1) (SP:Q38884) [Arabidopsis thaliana]
Length = 442
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +2
Query: 254 SHFISDVVLSSDGNYAL-SGSWDKTLRLWDLAAGKTT--RRFEDHTKDVLSVAFSVDNRQ 424
S +SDV ++SD + + S + +WD AG + D + S+ VDN+
Sbjct: 150 SRGLSDVAITSDEDSRIFSPDTLGMVHVWDRRAGVSPCIELSTDRYDSIKSIQIYVDNQT 209
Query: 425 IVSGSRDKTIKLWN 466
I ++ I +W+
Sbjct: 210 IFGAGKEGIIHIWD 223
>At1g65030.1 68414.m07371 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to PAK/PLC-interacting protein 1 (GI:14211689)
[Homo sapiens]
Length = 345
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Frame = +2
Query: 254 SHFISDVVLSSDGNYALSGSWDKTLRLWDLAAGKTTRRFED--HTKDVLSVAFSVDN--- 418
SH ++ G A SG D T+ L+DL + + D H + +++F +
Sbjct: 39 SHISPITTVACSGPAAASGGSDDTIHLYDLPSASSLGSLLDHNHAASITALSFYTPSSLS 98
Query: 419 --RQIVSGSRDKTIKLWNT 469
R ++S + D ++ +++T
Sbjct: 99 FPRNLISAAADGSVAIFDT 117
>At5g60050.1 68418.m07530 PRLI-interacting factor-related contains
weak similarity to PRLI-interacting factor G
(GI:11139264) [Arabidopsis thaliana]
Length = 499
Score = 28.3 bits (60), Expect = 5.2
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 173 RDKTLIVWKLTRDENNYGIPQKRLYGHSH 259
R+ ++++KL R+E +Y + + LYG H
Sbjct: 271 REMKVLIFKLVREEADYDVSRDTLYGLCH 299
>At5g59120.1 68418.m07409 subtilase family protein contains
similarity to prepro-cucumisin GI:807698 from [Cucumis
melo]; non-consensus AA acceptor site at exon 6
Length = 732
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 528 SDSHPIMPTPLLYPVVGTELSRSGISLTVSSRLTI 632
S++ I+P L YP + +LS SG + TV+ T+
Sbjct: 617 SEAKKILPRNLNYPSMSAKLSGSGTTFTVTFNRTL 651
>At5g01290.1 68418.m00039 mRNA capping enzyme family protein similar
to mRNA capping enzyme [Xenopus laevis] GI:7239232;
contains Pfam profiles PF01331: mRNA capping enzyme
catalytic domain, PF03919: mRNA capping enzyme
C-terminal domain
Length = 607
Score = 27.9 bits (59), Expect = 6.9
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 539 PNHANPIIVSCGWDRTVKVW 598
P+ N IV C WD+ KVW
Sbjct: 527 PSSYNGKIVECAWDKDKKVW 546
>At2g19540.1 68415.m02283 transducin family protein / WD-40 repeat
family protein contains WD-40 repeats (PF00400); similar
to Glutamate-rich WD repeat protein (GRWD)
(SP:Q9BQ67)[Homo sapiens]
Length = 469
Score = 27.9 bits (59), Expect = 6.9
Identities = 29/131 (22%), Positives = 53/131 (40%), Gaps = 6/131 (4%)
Frame = +2
Query: 104 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLS 283
GH V + +P ++ S S D ++ VW + ++ P H+ ++ + +
Sbjct: 267 GHTASVEDLQWSPAEENVFASCSVDGSVAVWDIRLGKS----PALSFKAHNADVNVISWN 322
Query: 284 SDGNYAL-SGSWDKTLRLWDLAAGK----TTRRFEDHTKDVLSVAFSVDNRQIVS-GSRD 445
+ L SGS D T + DL K FE H + S+ +S ++ S D
Sbjct: 323 RLASCMLASGSDDGTFSIRDLRLIKGGDAVVAHFEYHKHPITSIEWSAHEASTLAVTSGD 382
Query: 446 KTIKLWNTLAE 478
+ +W+ E
Sbjct: 383 NQLTIWDLSLE 393
>At4g03970.1 68417.m00561 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At5g28170, At1g35110,
At1g44880, At3g42530, At4g19320, At5g36020, At3g43010,
At2g10350
Length = 1043
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 140 PKYPDMILSSSRDKTLIVWK-LTRDENNYGIPQ 235
P D++L S KT+++WK LT + +PQ
Sbjct: 220 PGLLDLVLDDSTSKTILLWKRLTHPKQVISLPQ 252
>At3g02260.1 68416.m00207 auxin transport protein (BIG) nearly
identical to auxin transport protein; BIG [Arabidopsis
thaliana] GI:21779966; contains Pfam profiles PF02207:
Putative zinc finger in N-recognin, PF00569: Zinc
finger ZZ type
Length = 5098
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3
Query: 75 SDIFENGLKSDDSLKRQVR 19
SD+F L+SDDS+KR +R
Sbjct: 27 SDLFSRRLRSDDSIKRGLR 45
>At2g35510.1 68415.m04349 WWE domain-containing protein contains
Pfam domain, PF02825: WWE domain
Length = 568
Score = 27.5 bits (58), Expect = 9.1
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +3
Query: 540 PIMPTPLLYPVVGTELSRSGISLTVS 617
PIMP PLL+ + ++++R + L ++
Sbjct: 502 PIMPFPLLFKAISSKIARKDMDLIIA 527
>At1g71310.3 68414.m08231 expressed protein
Length = 165
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 596 WHLTNCKLKINHLGHSGYLNTVTVSPDGS 682
WH+ N + ++ SG + +VT SPDG+
Sbjct: 85 WHIVNRIMNMHAPEWSGEVRSVTYSPDGN 113
>At1g71310.2 68414.m08230 expressed protein
Length = 176
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 596 WHLTNCKLKINHLGHSGYLNTVTVSPDGS 682
WH+ N + ++ SG + +VT SPDG+
Sbjct: 85 WHIVNRIMNMHAPEWSGEVRSVTYSPDGN 113
>At1g71310.1 68414.m08229 expressed protein
Length = 176
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 596 WHLTNCKLKINHLGHSGYLNTVTVSPDGS 682
WH+ N + ++ SG + +VT SPDG+
Sbjct: 85 WHIVNRIMNMHAPEWSGEVRSVTYSPDGN 113
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,593,184
Number of Sequences: 28952
Number of extensions: 367548
Number of successful extensions: 2399
Number of sequences better than 10.0: 239
Number of HSP's better than 10.0 without gapping: 1179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1869
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1506636208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -