Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10i01
         (799 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    23   2.8  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    23   2.8  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    23   2.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.8  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    22   6.5  

>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = +3

Query: 249 KTEKVTKGGYKAPSLLNDEMFVEAKKRIEDVDIMGDPNSTVSVD 380
           KTE  +K  +   SLL+ +   E + R+ D D   D N TV  D
Sbjct: 5   KTEIKSKISFSVESLLSKKEDEEVEHRLSDRD-DDDENITVDDD 47


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
 Frame = -3

Query: 341 YIFDT--LLCFDKHLVIEQRGGLVPTFS 264
           +IF T  LL F  HL+ +  GGL  T+S
Sbjct: 127 HIFRTSVLLIFVMHLMFDTLGGLYSTWS 154


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
 Frame = -3

Query: 341 YIFDT--LLCFDKHLVIEQRGGLVPTFS 264
           +IF T  LL F  HL+ +  GGL  T+S
Sbjct: 127 HIFRTSVLLIFVMHLMFDTLGGLYSTWS 154


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +3

Query: 303 EMFVEAKKRIEDVDIMGDPNSTVSVDFKVQ 392
           ++ V ++KR  D  +   PN     DFK Q
Sbjct: 243 DLSVSSRKRSNDDSVSQPPNRKPRTDFKPQ 272


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = +3

Query: 468 KIDLEAFGRQLKLVLKKQEGLIKKDGLKVWKALKNETQPHGVDYEE 605
           K D      + K + KK    +  +  ++WK L  +  P G+ +E+
Sbjct: 67  KSDCAKCSEKQKEMTKKVIHFLSHNKQQMWKELTAKYDPDGIYFEK 112


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,547
Number of Sequences: 336
Number of extensions: 3654
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21687721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)