Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte10i01
(799 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0685 + 30891289-30891810,30892740-30892915,30893379-308934... 30 1.9
04_04_1615 + 34793511-34793660,34794013-34794070,34794163-347944... 29 5.7
02_04_0039 - 19118632-19118820,19119018-19119395,19120151-191203... 29 5.7
06_03_1207 + 28418473-28421073 28 7.5
06_03_0830 + 25159758-25162460 28 7.5
03_05_0944 + 29046793-29046922,29048091-29048464,29048556-290486... 28 7.5
02_02_0716 - 13264983-13265195,13265219-13265968,13266307-132664... 28 7.5
09_01_0102 + 1582793-1582898,1582988-1583093,1584115-1584172,158... 28 9.9
>02_05_0685 +
30891289-30891810,30892740-30892915,30893379-30893492,
30893846-30893954,30894038-30894124,30895137-30895736,
30895823-30896101,30896808-30896897,30897151-30897507,
30897924-30898160,30898733-30898953,30899856-30899955,
30900042-30900188,30900287-30900385
Length = 1045
Score = 30.3 bits (65), Expect = 1.9
Identities = 31/137 (22%), Positives = 58/137 (42%)
Frame = +3
Query: 198 SHPANSNSADSGKTPHLKTEKVTKGGYKAPSLLNDEMFVEAKKRIEDVDIMGDPNSTVSV 377
SHPA + + + L+ A + +D+ E ++ E++DI D + V
Sbjct: 34 SHPAQAQA--QARAGPLRLPSARSPSRAAAPVSDDD---EDEEDDEEIDIRDDAD--VDE 86
Query: 378 DFKVQSSEFGDSESLSDKEHSAESQEDGVHKIDLEAFGRQLKLVLKKQEGLIKKDGLKVW 557
++ E D ES ++E E +DGV +++ E GR+ +++ K +
Sbjct: 87 EYDDDDDEELDEESGGEEEEEEEG-DDGVEELEEEEGGREGTAARRRRSEEYKSQRVGKL 145
Query: 558 KALKNETQPHGVDYEEM 608
A E +DY E+
Sbjct: 146 VAEVREFGEDIIDYNEL 162
>04_04_1615 +
34793511-34793660,34794013-34794070,34794163-34794410,
34794485-34794601,34795309-34795369,34795860-34795954,
34796048-34796122,34796316-34796401,34796529-34796578,
34796667-34796707,34796784-34796948,34797204-34797271,
34797362-34797422,34797878-34798393
Length = 596
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 90 TIDELRNVFHVEHHSRVPEYHLVQ-LTHHLARRNIPTSHPANSNSAD 227
T +E+ ++H HL++ + HH ARRN+ + N + A+
Sbjct: 106 TREEVEESIKIKHAVSSARKHLIEVILHHAARRNLKARYHHNQSCAE 152
>02_04_0039 -
19118632-19118820,19119018-19119395,19120151-19120345,
19120425-19120502,19120567-19120752,19120828-19121058,
19121137-19121490,19121588-19121785,19121869-19122039,
19122156-19122263,19122362-19122580,19122665-19122871,
19122978-19123196,19123315-19123389,19123749-19123901
Length = 986
Score = 28.7 bits (61), Expect = 5.7
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 8/127 (6%)
Frame = +3
Query: 213 SNSADSGKTPH-LKTEKVTKGGYKAPSLLNDEMFVEAKK----RIEDVDIMGDPNSTVSV 377
+N DS + P L T + + + D +EAK R+ + D+ T S
Sbjct: 243 TNGGDSEEAPAPLTTAQRLAAAAVSTEIPPDRFGIEAKHFTETRVLNRDVRIVVEGTDSF 302
Query: 378 DFKVQSSEFGDSESLSDKEHSAESQEDGVHK-IDLEA--FGRQLKLVLKKQEGLIKKDGL 548
+ S + D ++L D + E E+G+ K ++ A K+ LK E KKD L
Sbjct: 303 SNIIGSVYYSDGDTLKDL--ALELVENGLAKYVEWSANMMDVDAKIKLKNAELQAKKDQL 360
Query: 549 KVWKALK 569
++W K
Sbjct: 361 RIWTGFK 367
>06_03_1207 + 28418473-28421073
Length = 866
Score = 28.3 bits (60), Expect = 7.5
Identities = 19/42 (45%), Positives = 24/42 (57%)
Frame = +3
Query: 468 KIDLEAFGRQLKLVLKKQEGLIKKDGLKVWKALKNETQPHGV 593
K+DL+ FG KL+ LIKKD LK K L NE +G+
Sbjct: 299 KLDLQVFG---KLI----NSLIKKDRLKEAKELLNEISANGL 333
>06_03_0830 + 25159758-25162460
Length = 900
Score = 28.3 bits (60), Expect = 7.5
Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 7/109 (6%)
Frame = +3
Query: 141 PEYHLVQLTHHLARRNIPTSHPANSNSADSGKTPHLKTEKVTKGGYK-APSLLNDEMFVE 317
PE V + +N+ S + PH +EK T GG+ AP + D E
Sbjct: 286 PENPFVSNKMDVQDQNVSISVDIKKGESFLEDMPH--SEKNTVGGWDLAPLDMQDSSDDE 343
Query: 318 AKKRIE------DVDIMGDPNSTVSVDFKVQSSEFGDSESLSDKEHSAE 446
+ ++ E D D+ G N + K + FGDS +DK+ AE
Sbjct: 344 STRKEEGPTSSSDTDVKGAVNE---LRLKRCMTSFGDSSKAADKKSKAE 389
>03_05_0944 +
29046793-29046922,29048091-29048464,29048556-29048687,
29048829-29049210,29049370-29049513,29049593-29049777,
29049925-29050051,29050603-29050676,29051071-29051147,
29051256-29051292,29051453-29051619,29051800-29051983,
29052053-29052130,29052451-29052570,29052648-29052707,
29053057-29053179,29053848-29053941,29054019-29054197,
29054737-29055039,29055373-29055474,29055553-29055693,
29055831-29055995,29056168-29056344,29056432-29056554,
29057787-29057867,29057983-29058099,29058214-29058386,
29058846-29058923,29058994-29059141,29059755-29059877,
29060015-29060071,29060145-29060255,29060382-29060573,
29060690-29060863,29061263-29061373,29061462-29061531,
29061734-29061812,29061898-29062000,29062086-29062256,
29062348-29062470,29062548-29062661,29062935-29063041,
29063117-29063168,29063245-29063351,29063589-29063703,
29063819-29063929,29064016-29064153,29064230-29064352,
29064535-29064606,29064774-29064886,29066780-29067110,
29067199-29067381,29068669-29068863,29068943-29069110,
29069208-29069340,29069511-29069595,29069726-29069765
Length = 2591
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 87 MTIDELRNVFHVEHHSRVPEYHLVQ 161
+TI +L VEHHSRV E+ VQ
Sbjct: 526 LTIMDLLQSLFVEHHSRVQEFFSVQ 550
>02_02_0716 -
13264983-13265195,13265219-13265968,13266307-13266463,
13266542-13266582
Length = 386
Score = 28.3 bits (60), Expect = 7.5
Identities = 22/91 (24%), Positives = 38/91 (41%)
Frame = +3
Query: 318 AKKRIEDVDIMGDPNSTVSVDFKVQSSEFGDSESLSDKEHSAESQEDGVHKIDLEAFGRQ 497
AKK ++ + G T ++D +++ G ++ E L
Sbjct: 72 AKKEFAELALDGSNYLTWALDVEIKLDSMGLDHTIVLPEVGTVESTKAEKAKALHFLRHH 131
Query: 498 LKLVLKKQEGLIKKDGLKVWKALKNETQPHG 590
L L LK E +I+KD L +W++LK+ G
Sbjct: 132 LYLDLKS-EYMIEKDPLVLWQSLKDRFDQQG 161
>09_01_0102 +
1582793-1582898,1582988-1583093,1584115-1584172,
1584676-1584745,1585132-1585197,1586374-1586429,
1587992-1588078,1588819-1589139,1589827-1589946,
1590747-1590881,1591529-1591605,1591681-1591756,
1592800-1592874,1592971-1593075,1593299-1593374,
1594482-1594617,1594702-1594804,1595186-1595298,
1596907-1597111,1597173-1597301,1597403-1597517,
1597710-1597795,1599108-1599203,1599615-1599751,
1600374-1600476,1601809-1601888,1602013-1602091,
1602241-1602298,1602489-1602586,1602673-1602767,
1602861-1602918
Length = 1074
Score = 27.9 bits (59), Expect = 9.9
Identities = 15/46 (32%), Positives = 30/46 (65%)
Frame = +3
Query: 474 DLEAFGRQLKLVLKKQEGLIKKDGLKVWKALKNETQPHGVDYEEMI 611
+LEA Q+++ ++++E L++K L++ KAL++E Y+E I
Sbjct: 734 ELEAEMMQVEVDIEQKELLVQKTNLRLTKALQDENDRRAC-YKEFI 778
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,189,678
Number of Sequences: 37544
Number of extensions: 380922
Number of successful extensions: 1162
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1162
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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