Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10h24
         (536 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    27   0.079
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   3.9  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   3.9  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   3.9  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   3.9  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   6.9  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 27.5 bits (58), Expect = 0.079
 Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = +1

Query: 283 GSL-PSSKALARRPDEPASSPSPNVLPRP 366
           GS+ P+S A    P+E A+SP+P  +P P
Sbjct: 35  GSMTPNSAASPAPPEEEAASPTPGDVPTP 63


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 214 NPNVATIDNNSH*KYTSHSI 155
           +PN+    N +H  Y SHSI
Sbjct: 333 SPNLPLTHNIAHNPYPSHSI 352


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 7/49 (14%)
 Frame = +2

Query: 74  LFMDFNKTILHYKLT-----HQNRIS-ADIHI-IDRV*CIFLM*VIVDC 199
           LFM  N T+  Y  T     H  R S  +I + +D   C+FL+ V  DC
Sbjct: 254 LFMMANITVAVYGFTSEIVDHGIRFSFKEIGLLVDSTYCLFLLFVFCDC 302


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 7/49 (14%)
 Frame = +2

Query: 74  LFMDFNKTILHYKLT-----HQNRIS-ADIHI-IDRV*CIFLM*VIVDC 199
           LFM  N T+  Y  T     H  R S  +I + +D   C+FL+ V  DC
Sbjct: 254 LFMMANITVAVYGFTSEIVDHGIRFSFKEIGLLVDSTYCLFLLFVFCDC 302


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 7/49 (14%)
 Frame = +2

Query: 74  LFMDFNKTILHYKLT-----HQNRIS-ADIHI-IDRV*CIFLM*VIVDC 199
           LFM  N T+  Y  T     H  R S  +I + +D   C+FL+ V  DC
Sbjct: 254 LFMMANITVAVYGFTSEIVDHGIRFSFKEIGLLVDSTYCLFLLFVFCDC 302


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 10/42 (23%), Positives = 18/42 (42%)
 Frame = +1

Query: 91  QNNSSLQVNPSKQNQCRYSHNRSSVMYISNVSYCRLSRRSGF 216
           +NN    +N   +  C+    R  ++   + S  R  RRS +
Sbjct: 43  KNNGECVINKKNRTACKACRLRKCLLVGMSKSGSRYGRRSNW 84


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,569
Number of Sequences: 336
Number of extensions: 2294
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13097125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)