Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10h24
         (536 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g38470.1 68417.m05436 protein kinase family protein similar t...    28   4.5  
At2g23820.2 68415.m02846 metal-dependent phosphohydrolase HD dom...    27   7.9  
At2g23820.1 68415.m02845 metal-dependent phosphohydrolase HD dom...    27   7.9  

>At4g38470.1 68417.m05436 protein kinase family protein similar to
           protein kinase [gi:170047] from Glycine max; contains
           Pfam protein kinase domain PF00069
          Length = 575

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 14/47 (29%), Positives = 27/47 (57%)
 Frame = +2

Query: 14  NGFHR*LVRYNYELNIKRN*LFMDFNKTILHYKLTHQNRISADIHII 154
           N F+R   RY  ++N++R    +  +K +LH     QNR + ++H++
Sbjct: 62  NHFNRLPARYALDVNVERAEDVL-MHKRLLHSAYDPQNRPAIEVHLV 107


>At2g23820.2 68415.m02846 metal-dependent phosphohydrolase HD
           domain-containing protein contains Pfam profile PF01966:
           HD domain
          Length = 257

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = -2

Query: 211 PNVATIDNNSH*KYTSHSIDYVNICT 134
           PNVA + ++S     S +ID++++CT
Sbjct: 62  PNVAAVPSSSSSSSASSAIDFLSLCT 87


>At2g23820.1 68415.m02845 metal-dependent phosphohydrolase HD
           domain-containing protein contains Pfam profile PF01966:
           HD domain
          Length = 245

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = -2

Query: 211 PNVATIDNNSH*KYTSHSIDYVNICT 134
           PNVA + ++S     S +ID++++CT
Sbjct: 62  PNVAAVPSSSSSSSASSAIDFLSLCT 87


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,196,078
Number of Sequences: 28952
Number of extensions: 192506
Number of successful extensions: 463
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 462
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 993966856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)