Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10h21
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   4.9  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   4.9  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   8.6  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -2

Query: 347 SFDLGLLVNISNVTSTDSYGSQPAFLKNGASVLRTVIRF 231
           SF  GLLV I N   +         L++  ++L   IRF
Sbjct: 163 SFSTGLLVMIFNSALSYKASEIVVMLRSRFAILNKQIRF 201


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = -2

Query: 347 SFDLGLLVNISNVTSTDSYGSQPAFLKNGASVLRTVIRF 231
           SF  GLLV I N   +         L++  ++L   IRF
Sbjct: 181 SFSTGLLVMIFNSALSYKASEIVVMLRSRFAILNKQIRF 219


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/36 (22%), Positives = 17/36 (47%)
 Frame = +1

Query: 385 TK*VCRRSGCGPRSVIWRPLLYNNEDYIKTNLNKFE 492
           T   C     G  + +   + +NN D+++ N  +F+
Sbjct: 345 TSETCEEIVAGVTTYLVILIQFNNSDFVQRNSTEFD 380


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,038
Number of Sequences: 336
Number of extensions: 2171
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)