Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10h20
         (675 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB208994-1|BAD92231.1|  644|Homo sapiens tripartite motif-contai...    31   4.9  
D21205-1|BAA04747.1|  630|Homo sapiens estrogen responsive finge...    30   6.5  
BC042541-1|AAH42541.1|  630|Homo sapiens tripartite motif-contai...    30   6.5  
BC016924-1|AAH16924.1|  630|Homo sapiens tripartite motif-contai...    30   6.5  

>AB208994-1|BAD92231.1|  644|Homo sapiens tripartite
           motif-containing 25 variant protein.
          Length = 644

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 22/73 (30%), Positives = 36/73 (49%)
 Frame = +2

Query: 89  H*CCAPRSVSINSAD*YKPILCRIYYLNSKMNSDSNFILNQIRQRHENHVDTINAVGENS 268
           H  C+P S+S  SAD    +  ++  + S++N  S   L+ +R R ++   T N   E  
Sbjct: 197 HKACSPASLSQASADLEATLRHKLTVMYSQINGASR-ALDDVRNRQQDVRMTANRKVEQL 255

Query: 269 HAAQIKMRALLVA 307
                +M+ALL A
Sbjct: 256 QQEYTEMKALLDA 268


>D21205-1|BAA04747.1|  630|Homo sapiens estrogen responsive finger
           protein protein.
          Length = 630

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 22/73 (30%), Positives = 36/73 (49%)
 Frame = +2

Query: 89  H*CCAPRSVSINSAD*YKPILCRIYYLNSKMNSDSNFILNQIRQRHENHVDTINAVGENS 268
           H  C+P S+S  SAD    +  ++  + S++N  S   L+ +R R ++   T N   E  
Sbjct: 183 HKTCSPASLSQASADLEATLRHKLTVMYSQINGASR-ALDDVRNRQQDVRMTANRKVEQL 241

Query: 269 HAAQIKMRALLVA 307
                +M+ALL A
Sbjct: 242 QQEYTEMKALLDA 254


>BC042541-1|AAH42541.1|  630|Homo sapiens tripartite
           motif-containing 25 protein.
          Length = 630

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 22/73 (30%), Positives = 36/73 (49%)
 Frame = +2

Query: 89  H*CCAPRSVSINSAD*YKPILCRIYYLNSKMNSDSNFILNQIRQRHENHVDTINAVGENS 268
           H  C+P S+S  SAD    +  ++  + S++N  S   L+ +R R ++   T N   E  
Sbjct: 183 HKTCSPASLSQASADLEATLRHKLTVMYSQINGASR-ALDDVRNRQQDVRMTANRKVEQL 241

Query: 269 HAAQIKMRALLVA 307
                +M+ALL A
Sbjct: 242 QQEYTEMKALLDA 254


>BC016924-1|AAH16924.1|  630|Homo sapiens tripartite
           motif-containing 25 protein.
          Length = 630

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 22/73 (30%), Positives = 36/73 (49%)
 Frame = +2

Query: 89  H*CCAPRSVSINSAD*YKPILCRIYYLNSKMNSDSNFILNQIRQRHENHVDTINAVGENS 268
           H  C+P S+S  SAD    +  ++  + S++N  S   L+ +R R ++   T N   E  
Sbjct: 183 HKTCSPASLSQASADLEATLRHKLTVMYSQINGASR-ALDDVRNRQQDVRMTANRKVEQL 241

Query: 269 HAAQIKMRALLVA 307
                +M+ALL A
Sbjct: 242 QQEYTEMKALLDA 254


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,311,732
Number of Sequences: 237096
Number of extensions: 1737759
Number of successful extensions: 3758
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3758
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)