Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10h19
         (676 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q90XH4 Cluster: Sprouty4; n=4; Clupeocephala|Rep: Sprou...    37   0.51 
UniRef50_Q5ZCA3 Cluster: SIAH1 protein-like; n=4; Oryza sativa|R...    35   1.6  
UniRef50_Q8IJP7 Cluster: Putative uncharacterized protein; n=5; ...    35   1.6  
UniRef50_Q9W5X1 Cluster: CG9572-PA; n=3; Diptera|Rep: CG9572-PA ...    35   2.1  
UniRef50_Q2PC93 Cluster: SCO-spondin precursor; n=4; Eukaryota|R...    35   2.1  
UniRef50_A7RGY8 Cluster: Predicted protein; n=1; Nematostella ve...    34   2.7  
UniRef50_P18753 Cluster: Oocyte zinc finger protein XlCOF8.4; n=...    34   2.7  
UniRef50_A7PF89 Cluster: Chromosome chr11 scaffold_13, whole gen...    33   8.4  
UniRef50_Q7QHA5 Cluster: ENSANGP00000012694; n=1; Anopheles gamb...    33   8.4  
UniRef50_Q4QQE7 Cluster: Putative uncharacterized protein; n=1; ...    33   8.4  
UniRef50_Q22Z26 Cluster: Putative uncharacterized protein; n=5; ...    33   8.4  
UniRef50_A7SZK7 Cluster: Predicted protein; n=2; Nematostella ve...    33   8.4  
UniRef50_Q9UM47 Cluster: Neurogenic locus notch homolog protein ...    33   8.4  

>UniRef50_Q90XH4 Cluster: Sprouty4; n=4; Clupeocephala|Rep: Sprouty4
           - Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 310

 Score = 36.7 bits (81), Expect = 0.51
 Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
 Frame = +3

Query: 342 CQECPSCACPSDFNPST-PSMYDCRKYGHCLPSNDLITRFECLPNFPTGIFRCTTGETLG 518
           C++C  C C     P T PS + C +   C   N L+    C+       + CT  +  G
Sbjct: 173 CEKCGKCRCTECTLPRTLPSCWVCNQECLCSAQN-LVDSVTCMCLVKGVFYHCTDEDEEG 231

Query: 519 SGADKGC 539
           S ADK C
Sbjct: 232 SCADKPC 238


>UniRef50_Q5ZCA3 Cluster: SIAH1 protein-like; n=4; Oryza sativa|Rep:
           SIAH1 protein-like - Oryza sativa subsp. japonica (Rice)
          Length = 417

 Score = 35.1 bits (77), Expect = 1.6
 Identities = 27/99 (27%), Positives = 39/99 (39%), Gaps = 8/99 (8%)
 Frame = +3

Query: 366 CPSDFNPSTPSMYDCRKYGH--CLPSNDLITRFECLPN---FPTGIFRCTTGETLGSGAD 530
           CP  F    P ++ C   GH  C P  D +      P+   F T   RC   E + +  +
Sbjct: 39  CPVCFQILRPPVFQC-DLGHLVCSPCRDNLPAGGKCPSPSCFGTPSVRCVAMERVVNSVE 97

Query: 531 KGCCYQ---CPEYFAYQHMTFYDLHLYLRPCRKPSAKTG 638
             C Y    CP+  AY ++T ++      PC  P    G
Sbjct: 98  VACAYAEHGCPDKIAYANITEHEKTCPHAPCFCPEPGCG 136


>UniRef50_Q8IJP7 Cluster: Putative uncharacterized protein; n=5;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 775

 Score = 35.1 bits (77), Expect = 1.6
 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
 Frame = -2

Query: 603 DINANRKKSCADRRNIPDIDNSNLYQ----HHYQESHRWCTEIYQL 478
           +INA ++K+     NI D  N  LY+    H+    H+WC++ YQ+
Sbjct: 717 EINAGQQKNPFLHENIKDSTNYELYKKKKIHYASHIHKWCSKTYQI 762


>UniRef50_Q9W5X1 Cluster: CG9572-PA; n=3; Diptera|Rep: CG9572-PA -
           Drosophila melanogaster (Fruit fly)
          Length = 441

 Score = 34.7 bits (76), Expect = 2.1
 Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
 Frame = +3

Query: 321 VETNKETCQECPSCACPSDF--NPSTPSMYDCRKYGHCLPSNDLITRFECLPNFPTGIFR 494
           V T  E     P+C+C   +  NP +   ++C   G C   +   + F+C+P       +
Sbjct: 177 VNTKCEIINGVPTCSCVHGYVGNPLSGCRHECDHDGDCSSRDMCSSNFKCVP----ACGQ 232

Query: 495 CTTGETLGSGADKGCCYQCPE 557
           C TG T  + ++     +CP+
Sbjct: 233 CGTGATCRTVSNHRAVCECPK 253


>UniRef50_Q2PC93 Cluster: SCO-spondin precursor; n=4; Eukaryota|Rep:
            SCO-spondin precursor - Gallus gallus (Chicken)
          Length = 5255

 Score = 34.7 bits (76), Expect = 2.1
 Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
 Frame = +3

Query: 345  QECPSCACPSDFNPSTPSMYDCRKYGHCLPSNDLITRF--ECLPNFPTGIFRCTTGETLG 518
            Q C +C+C +      P+   C    HC P ++   R    C+P    G + C   +  G
Sbjct: 1336 QGCRNCSCTAGLWQCVPTAEPCPAQPHC-PDSEFPCRSGGRCVP----GAWLCDNEDDCG 1390

Query: 519  SGADKGCCYQC 551
             G+D+ C   C
Sbjct: 1391 DGSDEVCALHC 1401


>UniRef50_A7RGY8 Cluster: Predicted protein; n=1; Nematostella
            vectensis|Rep: Predicted protein - Nematostella vectensis
          Length = 1627

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
 Frame = +3

Query: 327  TNKETCQECPSCACPSDFNPSTPSMYD----CRKYGHCLPSNDLITRFECLPNFPTGIFR 494
            T+K   ++CP C   + F        D    C KY +C   +D +    C PNF    FR
Sbjct: 1271 TDKSDEEDCPPCK-ENQFRCDNGQCIDGDPRCDKYKNCTDGSDELGCATCEPNF----FR 1325

Query: 495  CTTGETLGS 521
            C TG+ + +
Sbjct: 1326 CNTGKCISA 1334


>UniRef50_P18753 Cluster: Oocyte zinc finger protein XlCOF8.4; n=19;
           Xenopus|Rep: Oocyte zinc finger protein XlCOF8.4 -
           Xenopus laevis (African clawed frog)
          Length = 780

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 6/87 (6%)
 Frame = +3

Query: 339 TCQECPSCAC-PSDFNP-----STPSMYDCRKYGHCLPSNDLITRFECLPNFPTGIFRCT 500
           +C EC  C    SDFN      +    Y C + G C P++ ++T            +R  
Sbjct: 675 SCSECGKCFTRSSDFNVHRRTHTGEKPYSCSECGRCFPTSSVLTSH----------WRTH 724

Query: 501 TGETLGSGADKGCCYQCPEYFAYQHMT 581
           TGE   S  + G C+    Y  Y H T
Sbjct: 725 TGEKPFSCTECGKCFSRETYLKYHHRT 751


>UniRef50_A7PF89 Cluster: Chromosome chr11 scaffold_13, whole genome
           shotgun sequence; n=3; Vitis vinifera|Rep: Chromosome
           chr11 scaffold_13, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 675

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +3

Query: 501 TGETLGSGADKGCCYQCPEYFAY 569
           T ET+G+G  + CC QC + FAY
Sbjct: 36  TIETVGAGCRRACCKQCKQSFAY 58


>UniRef50_Q7QHA5 Cluster: ENSANGP00000012694; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000012694 - Anopheles gambiae
           str. PEST
          Length = 139

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
 Frame = +3

Query: 429 LPSNDLITRFECLPNFPTGIFRCTTGET-LG-----SGADKGCCYQCPEYFAYQHMTFYD 590
           +P       +E LP     +FR T  +  LG       A K   Y+ PEYF+Y + +FYD
Sbjct: 34  MPKVSKPAEYELLPGMSPKVFRETEYDNQLGPIPMTGDAAKNFSYKNPEYFSYHNYSFYD 93

Query: 591 L 593
           +
Sbjct: 94  I 94


>UniRef50_Q4QQE7 Cluster: Putative uncharacterized protein; n=1;
           Schistosoma mansoni|Rep: Putative uncharacterized
           protein - Schistosoma mansoni (Blood fluke)
          Length = 551

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -2

Query: 567 RRNIPDIDNSNLYQHHYQESHRWCTEIYQLEN 472
           R NIP    SN   H Y+ + R+ T+I QL+N
Sbjct: 32  RSNIPKTKESNSVSHVYENADRYSTDIRQLQN 63


>UniRef50_Q22Z26 Cluster: Putative uncharacterized protein; n=5;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1277

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 21/75 (28%), Positives = 31/75 (41%)
 Frame = +3

Query: 327 TNKETCQECPSCACPSDFNPSTPSMYDCRKYGHCLPSNDLITRFECLPNFPTGIFRCTTG 506
           T  +TC +C S  C +   P+  +   C         N  + + +C+PN P G F  T  
Sbjct: 640 TINQTCSQCNSI-CATCSGPNNNNCSSCT-------GNSFLYQNQCIPNCPNGYFNNTNN 691

Query: 507 ETLGSGADKGCCYQC 551
            T  +  D   CY C
Sbjct: 692 NTC-TPCDSS-CYTC 704


>UniRef50_A7SZK7 Cluster: Predicted protein; n=2; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 634

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
 Frame = +3

Query: 330 NKETCQECPSCACPSDFNPSTPSMYDCRKYGHCLPSNDLITRFECLPNFPTGI-FRC 497
           N   C  C  C   +DF+       DC+ + H    N     +ECL + P  I F C
Sbjct: 113 NGNYCPICEKCYSDNDFDSKMMHCNDCQHWVHASCQNINPDEYECLSDLPDSIPFVC 169


>UniRef50_Q9UM47 Cluster: Neurogenic locus notch homolog protein 3
           precursor (Notch 3) [Contains: Notch 3 extracellular
           truncation; Notch 3 intracellular domain]; n=10;
           Euteleostomi|Rep: Neurogenic locus notch homolog protein
           3 precursor (Notch 3) [Contains: Notch 3 extracellular
           truncation; Notch 3 intracellular domain] - Homo sapiens
           (Human)
          Length = 2321

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 31/101 (30%), Positives = 38/101 (37%), Gaps = 20/101 (19%)
 Frame = +3

Query: 339 TCQECPS---CACPSDF------NPSTP-SMYDCRKYGHCLPSNDLITRFECLPNF---- 476
           TC   P    C CP+ +      NP+ P +   CR  G C  S DL     CLP F    
Sbjct: 173 TCLNTPGSFRCQCPAGYTGPLCENPAVPCAPSPCRNGGTCRQSGDLTYDCACLPGFEGQN 232

Query: 477 -PTGI-----FRCTTGETLGSGADKGCCYQCPEYFAYQHMT 581
               +      RC  G T   G +   C QCP  +  Q  T
Sbjct: 233 CEVNVDDCPGHRCLNGGTCVDGVNTYNC-QCPPEWTGQFCT 272


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 603,317,740
Number of Sequences: 1657284
Number of extensions: 11665925
Number of successful extensions: 25013
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 24097
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24996
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52066120554
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)