Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10h19
         (676 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0158 + 1374169-1374324,1374464-1375295,1375977-1376242           35   0.052
10_01_0054 - 773395-774518,776957-777124,777455-778376                 32   0.48 
01_01_0947 - 7450144-7450503,7450637-7451023,7451955-7452251           30   1.9  
05_03_0093 + 8340210-8340548,8344290-8344676,8344759-8345118           29   2.6  
02_01_0039 - 271926-273503                                             28   7.8  

>01_01_0158 + 1374169-1374324,1374464-1375295,1375977-1376242
          Length = 417

 Score = 35.1 bits (77), Expect = 0.052
 Identities = 27/99 (27%), Positives = 39/99 (39%), Gaps = 8/99 (8%)
 Frame = +3

Query: 366 CPSDFNPSTPSMYDCRKYGH--CLPSNDLITRFECLPN---FPTGIFRCTTGETLGSGAD 530
           CP  F    P ++ C   GH  C P  D +      P+   F T   RC   E + +  +
Sbjct: 39  CPVCFQILRPPVFQC-DLGHLVCSPCRDNLPAGGKCPSPSCFGTPSVRCVAMERVVNSVE 97

Query: 531 KGCCYQ---CPEYFAYQHMTFYDLHLYLRPCRKPSAKTG 638
             C Y    CP+  AY ++T ++      PC  P    G
Sbjct: 98  VACAYAEHGCPDKIAYANITEHEKTCPHAPCFCPEPGCG 136


>10_01_0054 - 773395-774518,776957-777124,777455-778376
          Length = 737

 Score = 31.9 bits (69), Expect = 0.48
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
 Frame = +3

Query: 342 CQECPSCACPSDFN-----PSTPSMYDCRKYGHCLPSNDLITRFECLPNFPTGIFRCTTG 506
           C++   CA P+ +       +TP  Y+CR +    PS D   + EC   FP    R   G
Sbjct: 306 CKDIDECAHPNKYPCHGVCRNTPGDYECRCHTGYQPSGDGPKKQECSSKFPFPA-RLAVG 364

Query: 507 ETLG 518
            TLG
Sbjct: 365 ITLG 368


>01_01_0947 - 7450144-7450503,7450637-7451023,7451955-7452251
          Length = 347

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 25/93 (26%), Positives = 32/93 (34%), Gaps = 5/93 (5%)
 Frame = +3

Query: 366 CPSDFNPSTPSMYDCRKYGHCLPSNDLITRFECLPNF--PTGIFRCTTGETLGSGADKGC 539
           CP   N   P ++ C+  GH L S          P      G  RC   E +    +  C
Sbjct: 86  CPVCTNSMYPPIHQCQN-GHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAESLELPC 144

Query: 540 CY---QCPEYFAYQHMTFYDLHLYLRPCRKPSA 629
            Y    CPE F Y     ++     RP   P A
Sbjct: 145 KYCSLGCPEIFPYYSKIKHEAQCMFRPYNCPYA 177


>05_03_0093 + 8340210-8340548,8344290-8344676,8344759-8345118
          Length = 361

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 25/93 (26%), Positives = 32/93 (34%), Gaps = 5/93 (5%)
 Frame = +3

Query: 366 CPSDFNPSTPSMYDCRKYGHCLPSNDLITRFECLPNF--PTGIFRCTTGETLGSGADKGC 539
           CP   N   P ++ C+  GH L S          P      G  RC   E +    +  C
Sbjct: 100 CPVCTNSMFPPIHQCQN-GHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAESLELPC 158

Query: 540 CY---QCPEYFAYQHMTFYDLHLYLRPCRKPSA 629
            Y    CPE F Y     ++     RP   P A
Sbjct: 159 KYCSLGCPEIFPYYSKIKHEAQCSFRPYNCPYA 191


>02_01_0039 - 271926-273503
          Length = 525

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +3

Query: 489 FRCTTGETLGSGADKGCCYQCPEYFAYQH 575
           FR      +    +KG C+ CPE F+  H
Sbjct: 263 FRRLLAAEMAERREKGLCFNCPEKFSKDH 291


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,795,525
Number of Sequences: 37544
Number of extensions: 309227
Number of successful extensions: 651
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 650
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1714968940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)