Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10h17
         (305 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1104 + 24339463-24340314,24340472-24340786                       26   6.7  
07_03_0139 + 14143383-14143512,14143601-14144334,14144413-141448...    25   8.9  

>08_02_1104 + 24339463-24340314,24340472-24340786
          Length = 388

 Score = 25.8 bits (54), Expect = 6.7
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
 Frame = -1

Query: 299 SPTSKISLYL---RVGEIKWIALDSGRACRC 216
           +P + +SL L   RV  +KW     GR CRC
Sbjct: 226 TPAAIMSLDLKDNRVAPVKWSPETPGRGCRC 256


>07_03_0139 +
           14143383-14143512,14143601-14144334,14144413-14144874,
           14144956-14145788,14145871-14146041,14146121-14146379,
           14146828-14146866,14147903-14147989
          Length = 904

 Score = 25.4 bits (53), Expect = 8.9
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -1

Query: 155 FNLSHFYFTLLSFIVEVLYIKFLIQIL 75
           F++ H   TLL  +VEV YI  LI +L
Sbjct: 851 FHVCHNMSTLLREVVEVEYIMALIHLL 877


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,596,155
Number of Sequences: 37544
Number of extensions: 100365
Number of successful extensions: 169
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 169
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 363831720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)